RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 ZFYVE9O95405 1425 aa22.55■■□□□ 1.2
GRIA3-205ENST00000611689 MYO5BQ9ULV0 1848 aa22.54■■□□□ 1.2
GRIA3-205ENST00000611689 LTKP29376 864 aa22.54■■□□□ 1.2
GRIA3-205ENST00000611689 HDGFP51858 240 aaKnown RBP22.54■■□□□ 1.2
GRIA3-205ENST00000611689 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.53■■□□□ 1.2
GRIA3-205ENST00000611689 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
GRIA3-205ENST00000611689 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
GRIA3-205ENST00000611689 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
GRIA3-205ENST00000611689 NEXMIFQ5QGS0 1516 aa22.5■■□□□ 1.19
GRIA3-205ENST00000611689 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
GRIA3-205ENST00000611689 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
GRIA3-205ENST00000611689 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
GRIA3-205ENST00000611689 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
GRIA3-205ENST00000611689 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
GRIA3-205ENST00000611689 MED14O60244 1454 aa22.44■■□□□ 1.18
GRIA3-205ENST00000611689 STRCQ7RTU9 1775 aa22.44■■□□□ 1.18
GRIA3-205ENST00000611689 STAC3Q96MF2 364 aa22.44■■□□□ 1.18
GRIA3-205ENST00000611689 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
GRIA3-205ENST00000611689 NPHP4O75161 1426 aaPredicted RBP22.43■■□□□ 1.18
GRIA3-205ENST00000611689 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
GRIA3-205ENST00000611689 PLEKHG1Q9ULL1 1385 aa22.43■■□□□ 1.18
GRIA3-205ENST00000611689 ADGRF5Q8IZF2 1346 aa22.43■■□□□ 1.18
GRIA3-205ENST00000611689 PPLO60437 1756 aa22.42■■□□□ 1.18
GRIA3-205ENST00000611689 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
GRIA3-205ENST00000611689 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
GRIA3-205ENST00000611689 IFT172Q9UG01 1749 aa22.4■■□□□ 1.18
GRIA3-205ENST00000611689 BCANQ96GW7 911 aa22.4■■□□□ 1.18
GRIA3-205ENST00000611689 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
GRIA3-205ENST00000611689 MYOM2P54296 1465 aa22.4■■□□□ 1.18
GRIA3-205ENST00000611689 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
GRIA3-205ENST00000611689 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
GRIA3-205ENST00000611689 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
GRIA3-205ENST00000611689 SETBP1Q9Y6X0 1596 aa22.34■■□□□ 1.17
GRIA3-205ENST00000611689 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
GRIA3-205ENST00000611689 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
GRIA3-205ENST00000611689 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
GRIA3-205ENST00000611689 TBX22Q9Y458 520 aa22.34■■□□□ 1.17
GRIA3-205ENST00000611689 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
GRIA3-205ENST00000611689 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
GRIA3-205ENST00000611689 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
GRIA3-205ENST00000611689 CFAP70Q5T0N1 1121 aa22.3■■□□□ 1.16
GRIA3-205ENST00000611689 ALKQ9UM73 1620 aa22.28■■□□□ 1.16
GRIA3-205ENST00000611689 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
GRIA3-205ENST00000611689 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
GRIA3-205ENST00000611689 METP08581 1390 aa22.25■■□□□ 1.15
GRIA3-205ENST00000611689 PIK3R4Q99570 1358 aa22.24■■□□□ 1.15
GRIA3-205ENST00000611689 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
GRIA3-205ENST00000611689 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
GRIA3-205ENST00000611689 KCNA6P17658 529 aa22.21■■□□□ 1.15
GRIA3-205ENST00000611689 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
GRIA3-205ENST00000611689 ZNF335Q9H4Z2 1342 aaPredicted RBP22.2■■□□□ 1.14
GRIA3-205ENST00000611689 PTPRUQ92729 1446 aa22.2■■□□□ 1.14
GRIA3-205ENST00000611689 LAMC1P11047 1609 aa22.2■■□□□ 1.14
GRIA3-205ENST00000611689 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
GRIA3-205ENST00000611689 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
GRIA3-205ENST00000611689 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
GRIA3-205ENST00000611689 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
GRIA3-205ENST00000611689 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
GRIA3-205ENST00000611689 STK26Q9P289 416 aa22.15■■□□□ 1.14
GRIA3-205ENST00000611689 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
GRIA3-205ENST00000611689 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
GRIA3-205ENST00000611689 RALGAPBQ86X10 1494 aa22.14■■□□□ 1.13
GRIA3-205ENST00000611689 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
GRIA3-205ENST00000611689 ABCC11Q96J66 1382 aa22.13■■□□□ 1.13
GRIA3-205ENST00000611689 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
GRIA3-205ENST00000611689 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
GRIA3-205ENST00000611689 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
GRIA3-205ENST00000611689 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
GRIA3-205ENST00000611689 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
GRIA3-205ENST00000611689 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
GRIA3-205ENST00000611689 TECPR2O15040 1411 aa22.09■■□□□ 1.13
GRIA3-205ENST00000611689 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
GRIA3-205ENST00000611689 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
GRIA3-205ENST00000611689 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
GRIA3-205ENST00000611689 ROBO2Q9HCK4 1378 aa22.09■■□□□ 1.13
GRIA3-205ENST00000611689 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
GRIA3-205ENST00000611689 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
GRIA3-205ENST00000611689 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
GRIA3-205ENST00000611689 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
GRIA3-205ENST00000611689 CPS1P31327 1500 aa22.06■■□□□ 1.12
GRIA3-205ENST00000611689 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
GRIA3-205ENST00000611689 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
GRIA3-205ENST00000611689 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
GRIA3-205ENST00000611689 DLC1Q96QB1 1528 aa22.03■■□□□ 1.12
GRIA3-205ENST00000611689 PRAM1Q96QH2 718 aa22.03■■□□□ 1.12
GRIA3-205ENST00000611689 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
GRIA3-205ENST00000611689 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
GRIA3-205ENST00000611689 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
GRIA3-205ENST00000611689 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
GRIA3-205ENST00000611689 POGKQ9P215 609 aa22.01■■□□□ 1.11
GRIA3-205ENST00000611689 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
GRIA3-205ENST00000611689 SAFB2Q14151 953 aaKnown RBP eCLIP21.97■■□□□ 1.11
GRIA3-205ENST00000611689 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
GRIA3-205ENST00000611689 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
GRIA3-205ENST00000611689 EIF3AQ14152 1382 aaKnown RBP21.96■■□□□ 1.11
GRIA3-205ENST00000611689 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
GRIA3-205ENST00000611689 C14orf37Q86TY3 774 aa21.95■■□□□ 1.1
GRIA3-205ENST00000611689 USP47Q96K76 1375 aa21.95■■□□□ 1.1
GRIA3-205ENST00000611689 C19orf44Q9H6X5 657 aa21.93■■□□□ 1.1
GRIA3-205ENST00000611689 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms