RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 IFT172Q9UG01 1749 aa17.08■□□□□ 0.32
VPS45-212ENST00000611412 PPLO60437 1756 aa17.08■□□□□ 0.32
VPS45-212ENST00000611412 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
VPS45-212ENST00000611412 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
VPS45-212ENST00000611412 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
VPS45-212ENST00000611412 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
VPS45-212ENST00000611412 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
VPS45-212ENST00000611412 ZNF142P52746 1687 aaPredicted RBP17.05■□□□□ 0.32
VPS45-212ENST00000611412 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
VPS45-212ENST00000611412 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
VPS45-212ENST00000611412 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
VPS45-212ENST00000611412 MYOM2P54296 1465 aa17.03■□□□□ 0.32
VPS45-212ENST00000611412 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
VPS45-212ENST00000611412 LTKP29376 864 aa17.03■□□□□ 0.32
VPS45-212ENST00000611412 TXNDC2Q86VQ3 553 aa17.01■□□□□ 0.31
VPS45-212ENST00000611412 HSPA2P54652 639 aa17.01■□□□□ 0.31
VPS45-212ENST00000611412 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
VPS45-212ENST00000611412 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
VPS45-212ENST00000611412 ABCF1Q8NE71 845 aaKnown RBP eCLIP17■□□□□ 0.31
VPS45-212ENST00000611412 BCANQ96GW7 911 aa17■□□□□ 0.31
VPS45-212ENST00000611412 SLIT1O75093 1534 aa16.99■□□□□ 0.31
VPS45-212ENST00000611412 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
VPS45-212ENST00000611412 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
VPS45-212ENST00000611412 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
VPS45-212ENST00000611412 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
VPS45-212ENST00000611412 PIK3C2GO75747 1445 aa16.98■□□□□ 0.31
VPS45-212ENST00000611412 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
VPS45-212ENST00000611412 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
VPS45-212ENST00000611412 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
VPS45-212ENST00000611412 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
VPS45-212ENST00000611412 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.3
VPS45-212ENST00000611412 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
VPS45-212ENST00000611412 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
VPS45-212ENST00000611412 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
VPS45-212ENST00000611412 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
VPS45-212ENST00000611412 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
VPS45-212ENST00000611412 C14orf93Q9H972 538 aaKnown RBP16.93■□□□□ 0.3
VPS45-212ENST00000611412 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
VPS45-212ENST00000611412 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
VPS45-212ENST00000611412 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
VPS45-212ENST00000611412 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
VPS45-212ENST00000611412 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
VPS45-212ENST00000611412 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
VPS45-212ENST00000611412 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.3
VPS45-212ENST00000611412 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.29
VPS45-212ENST00000611412 ADAMTS13Q76LX8 1427 aa16.89■□□□□ 0.29
VPS45-212ENST00000611412 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
VPS45-212ENST00000611412 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
VPS45-212ENST00000611412 STK26Q9P289 416 aa16.88■□□□□ 0.29
VPS45-212ENST00000611412 METP08581 1390 aa16.87■□□□□ 0.29
VPS45-212ENST00000611412 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
VPS45-212ENST00000611412 LAMC1P11047 1609 aa16.87■□□□□ 0.29
VPS45-212ENST00000611412 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
VPS45-212ENST00000611412 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
VPS45-212ENST00000611412 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
VPS45-212ENST00000611412 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
VPS45-212ENST00000611412 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
VPS45-212ENST00000611412 USP47Q96K76 1375 aa16.86■□□□□ 0.29
VPS45-212ENST00000611412 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
VPS45-212ENST00000611412 MED14O60244 1454 aa16.83■□□□□ 0.28
VPS45-212ENST00000611412 STRCQ7RTU9 1775 aa16.83■□□□□ 0.28
VPS45-212ENST00000611412 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
VPS45-212ENST00000611412 YTHDC2Q9H6S0 1430 aaKnown RBP16.82■□□□□ 0.28
VPS45-212ENST00000611412 TBX22Q9Y458 520 aa16.82■□□□□ 0.28
VPS45-212ENST00000611412 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
VPS45-212ENST00000611412 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
VPS45-212ENST00000611412 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
VPS45-212ENST00000611412 LRPPRCP42704 1394 aaKnown RBP16.78■□□□□ 0.28
VPS45-212ENST00000611412 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
VPS45-212ENST00000611412 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
VPS45-212ENST00000611412 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
VPS45-212ENST00000611412 ARHGEF28Q8N1W1 1705 aaKnown RBP16.76■□□□□ 0.27
VPS45-212ENST00000611412 PRAM1Q96QH2 718 aa16.76■□□□□ 0.27
VPS45-212ENST00000611412 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
VPS45-212ENST00000611412 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
VPS45-212ENST00000611412 POGKQ9P215 609 aa16.74■□□□□ 0.27
VPS45-212ENST00000611412 ABCC11Q96J66 1382 aa16.74■□□□□ 0.27
VPS45-212ENST00000611412 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
VPS45-212ENST00000611412 KCNA6P17658 529 aa16.74■□□□□ 0.27
VPS45-212ENST00000611412 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
VPS45-212ENST00000611412 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
VPS45-212ENST00000611412 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
VPS45-212ENST00000611412 TESK2Q96S53 571 aa16.72■□□□□ 0.27
VPS45-212ENST00000611412 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
VPS45-212ENST00000611412 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
VPS45-212ENST00000611412 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
VPS45-212ENST00000611412 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
VPS45-212ENST00000611412 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
VPS45-212ENST00000611412 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
VPS45-212ENST00000611412 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
VPS45-212ENST00000611412 TECPR2O15040 1411 aa16.7■□□□□ 0.26
VPS45-212ENST00000611412 CPS1P31327 1500 aa16.7■□□□□ 0.26
VPS45-212ENST00000611412 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
VPS45-212ENST00000611412 DISP3Q9P2K9 1392 aa16.68■□□□□ 0.26
VPS45-212ENST00000611412 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
VPS45-212ENST00000611412 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
VPS45-212ENST00000611412 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
VPS45-212ENST00000611412 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
VPS45-212ENST00000611412 FAM135BQ49AJ0 1406 aa16.66■□□□□ 0.26
VPS45-212ENST00000611412 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms