RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 CEP170BQ9Y4F5 1589 aaPredicted RBP31.56■■■□□ 2.64
UBE3C-209ENST00000611269 ZNF142P52746 1687 aaPredicted RBP31.53■■■□□ 2.64
UBE3C-209ENST00000611269 NBPF8Q3BBV2 869 aa31.53■■■□□ 2.64
UBE3C-209ENST00000611269 UHRF1BP1Q6BDS2 1440 aa31.52■■■□□ 2.64
UBE3C-209ENST00000611269 MYOM2P54296 1465 aa31.52■■■□□ 2.64
UBE3C-209ENST00000611269 STAC3Q96MF2 364 aa31.5■■■□□ 2.63
UBE3C-209ENST00000611269 PRAG1Q86YV5 1406 aa31.5■■■□□ 2.63
UBE3C-209ENST00000611269 NUTM2DQ5VT03 806 aaPredicted RBP31.5■■■□□ 2.63
UBE3C-209ENST00000611269 ADGRF5Q8IZF2 1346 aa31.47■■■□□ 2.63
UBE3C-209ENST00000611269 RIMS2Q9UQ26 1411 aa31.47■■■□□ 2.63
UBE3C-209ENST00000611269 TMEM2Q9UHN6 1383 aa31.46■■■□□ 2.63
UBE3C-209ENST00000611269 ZFYVE9O95405 1425 aa31.46■■■□□ 2.63
UBE3C-209ENST00000611269 MIER1Q8N108 512 aa31.45■■■□□ 2.63
UBE3C-209ENST00000611269 VGFO15240 615 aaPredicted RBP31.44■■■□□ 2.62
UBE3C-209ENST00000611269 THEMISQ8N1K5 641 aaPredicted RBP31.44■■■□□ 2.62
UBE3C-209ENST00000611269 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
UBE3C-209ENST00000611269 SLIT1O75093 1534 aa31.41■■■□□ 2.62
UBE3C-209ENST00000611269 TRPM1Q7Z4N2 1603 aa31.4■■■□□ 2.62
UBE3C-209ENST00000611269 ARHGAP23Q9P227 1491 aa31.39■■■□□ 2.62
UBE3C-209ENST00000611269 PIK3C2GO75747 1445 aa31.39■■■□□ 2.62
UBE3C-209ENST00000611269 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.38■■■□□ 2.61
UBE3C-209ENST00000611269 RALGAPBQ86X10 1494 aa31.37■■■□□ 2.61
UBE3C-209ENST00000611269 HDGFP51858 240 aaKnown RBP31.36■■■□□ 2.61
UBE3C-209ENST00000611269 SENP3Q9H4L4 574 aaPredicted RBP31.35■■■□□ 2.61
UBE3C-209ENST00000611269 LTKP29376 864 aa31.34■■■□□ 2.61
UBE3C-209ENST00000611269 TXNDC2Q86VQ3 553 aa31.33■■■□□ 2.61
UBE3C-209ENST00000611269 KIAA1210Q9ULL0 1709 aa31.32■■■□□ 2.6
UBE3C-209ENST00000611269 EID1Q9Y6B2 187 aa31.31■■■□□ 2.6
UBE3C-209ENST00000611269 NBPF1Q3BBV0 1214 aa31.31■■■□□ 2.6
UBE3C-209ENST00000611269 ROCK2O75116 1388 aaKnown RBP31.31■■■□□ 2.6
UBE3C-209ENST00000611269 CFAP70Q5T0N1 1121 aa31.3■■■□□ 2.6
UBE3C-209ENST00000611269 SCAF11Q99590 1463 aaKnown RBP31.28■■■□□ 2.6
UBE3C-209ENST00000611269 C14orf93Q9H972 538 aaKnown RBP31.27■■■□□ 2.6
UBE3C-209ENST00000611269 LMTK3Q96Q04 1460 aa31.26■■■□□ 2.59
UBE3C-209ENST00000611269 LAMC1P11047 1609 aa31.25■■■□□ 2.59
UBE3C-209ENST00000611269 NRXN3Q9Y4C0 1643 aa31.25■■■□□ 2.59
UBE3C-209ENST00000611269 IQGAP1P46940 1657 aa31.24■■■□□ 2.59
UBE3C-209ENST00000611269 GPRASP1Q5JY77 1395 aa31.24■■■□□ 2.59
UBE3C-209ENST00000611269 PLEKHG1Q9ULL1 1385 aa31.24■■■□□ 2.59
UBE3C-209ENST00000611269 SETBP1Q9Y6X0 1596 aa31.23■■■□□ 2.59
UBE3C-209ENST00000611269 ANKLE2Q86XL3 938 aa31.23■■■□□ 2.59
UBE3C-209ENST00000611269 CARD11Q9BXL7 1154 aa31.23■■■□□ 2.59
UBE3C-209ENST00000611269 ALKQ9UM73 1620 aa31.22■■■□□ 2.59
UBE3C-209ENST00000611269 BCANQ96GW7 911 aa31.21■■■□□ 2.59
UBE3C-209ENST00000611269 POLR1AO95602 1720 aaPredicted RBP31.19■■■□□ 2.58
UBE3C-209ENST00000611269 HSPA2P54652 639 aa31.19■■■□□ 2.58
UBE3C-209ENST00000611269 SETD1AO15047 1707 aaKnown RBP31.19■■■□□ 2.58
UBE3C-209ENST00000611269 ADGRB1O14514 1584 aa31.18■■■□□ 2.58
UBE3C-209ENST00000611269 TMEM132EQ6IEE7 984 aa31.16■■■□□ 2.58
UBE3C-209ENST00000611269 ASXL1Q8IXJ9 1541 aa31.16■■■□□ 2.58
UBE3C-209ENST00000611269 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
UBE3C-209ENST00000611269 USP47Q96K76 1375 aa31.14■■■□□ 2.57
UBE3C-209ENST00000611269 NCKAP5LQ9HCH0 1330 aa31.13■■■□□ 2.57
UBE3C-209ENST00000611269 CENPBP07199 599 aaPredicted RBP31.12■■■□□ 2.57
UBE3C-209ENST00000611269 EIF4G2P78344 907 aaKnown RBP eCLIP31.12■■■□□ 2.57
UBE3C-209ENST00000611269 HIRIP3Q9BW71 556 aaPredicted RBP31.12■■■□□ 2.57
UBE3C-209ENST00000611269 SLC26A8Q96RN1 970 aa31.1■■■□□ 2.57
UBE3C-209ENST00000611269 MED14O60244 1454 aa31.1■■■□□ 2.57
UBE3C-209ENST00000611269 HSPA5P11021 654 aaKnown RBP31.1■■■□□ 2.57
UBE3C-209ENST00000611269 DDX10Q13206 875 aaKnown RBP31.09■■■□□ 2.57
UBE3C-209ENST00000611269 NPHP4O75161 1426 aaPredicted RBP31.08■■■□□ 2.57
UBE3C-209ENST00000611269 METP08581 1390 aa31.08■■■□□ 2.57
UBE3C-209ENST00000611269 DIP2AQ14689 1571 aa31.07■■■□□ 2.56
UBE3C-209ENST00000611269 TBX22Q9Y458 520 aa31.04■■■□□ 2.56
UBE3C-209ENST00000611269 YTHDC2Q9H6S0 1430 aaKnown RBP31.04■■■□□ 2.56
UBE3C-209ENST00000611269 TRAK1Q9UPV9 953 aa31.03■■■□□ 2.56
UBE3C-209ENST00000611269 STK26Q9P289 416 aa31.02■■■□□ 2.56
UBE3C-209ENST00000611269 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
UBE3C-209ENST00000611269 ST20-MTHFSA0A0A6YYL1 179 aa31.01■■■□□ 2.55
UBE3C-209ENST00000611269 LRPPRCP42704 1394 aaKnown RBP30.99■■■□□ 2.55
UBE3C-209ENST00000611269 EIF3AQ14152 1382 aaKnown RBP30.99■■■□□ 2.55
UBE3C-209ENST00000611269 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
UBE3C-209ENST00000611269 PTPRUQ92729 1446 aa30.94■■■□□ 2.54
UBE3C-209ENST00000611269 ABCC11Q96J66 1382 aa30.93■■■□□ 2.54
UBE3C-209ENST00000611269 KNDC1Q76NI1 1749 aa30.93■■■□□ 2.54
UBE3C-209ENST00000611269 YTHDC1Q96MU7 727 aaKnown RBP30.92■■■□□ 2.54
UBE3C-209ENST00000611269 PIK3R4Q99570 1358 aa30.92■■■□□ 2.54
UBE3C-209ENST00000611269 DLC1Q96QB1 1528 aa30.91■■■□□ 2.54
UBE3C-209ENST00000611269 TECPR2O15040 1411 aa30.9■■■□□ 2.54
UBE3C-209ENST00000611269 CHD2O14647 1828 aaKnown RBP30.89■■■□□ 2.54
UBE3C-209ENST00000611269 AMOTL2Q9Y2J4 779 aa30.89■■■□□ 2.53
UBE3C-209ENST00000611269 CENPJQ9HC77 1338 aaPredicted RBP30.88■■■□□ 2.53
UBE3C-209ENST00000611269 TESK2Q96S53 571 aa30.88■■■□□ 2.53
UBE3C-209ENST00000611269 CPS1P31327 1500 aa30.88■■■□□ 2.53
UBE3C-209ENST00000611269 QRICH2Q9H0J4 1663 aa30.88■■■□□ 2.53
UBE3C-209ENST00000611269 XRN1Q8IZH2 1706 aaKnown RBP30.88■■■□□ 2.53
UBE3C-209ENST00000611269 AEBP2Q6ZN18 517 aaPredicted RBP30.87■■■□□ 2.53
UBE3C-209ENST00000611269 PRAM1Q96QH2 718 aa30.87■■■□□ 2.53
UBE3C-209ENST00000611269 WASHC2AQ641Q2 1341 aa30.85■■■□□ 2.53
UBE3C-209ENST00000611269 ROBO2Q9HCK4 1378 aa30.84■■■□□ 2.53
UBE3C-209ENST00000611269 SAFB2Q14151 953 aaKnown RBP eCLIP30.84■■■□□ 2.53
UBE3C-209ENST00000611269 POGKQ9P215 609 aa30.84■■■□□ 2.53
UBE3C-209ENST00000611269 WAPLQ7Z5K2 1190 aa30.82■■■□□ 2.53
UBE3C-209ENST00000611269 PLEKHH1Q9ULM0 1364 aa30.82■■■□□ 2.52
UBE3C-209ENST00000611269 C11orf95C9JLR9 678 aaPredicted RBP30.82■■■□□ 2.52
UBE3C-209ENST00000611269 FAM135BQ49AJ0 1406 aa30.82■■■□□ 2.52
UBE3C-209ENST00000611269 KCNA6P17658 529 aa30.81■■■□□ 2.52
UBE3C-209ENST00000611269 SIRT1Q96EB6 747 aa30.8■■■□□ 2.52
UBE3C-209ENST00000611269 PTCH1Q13635 1447 aa30.8■■■□□ 2.52
UBE3C-209ENST00000611269 SBNO2Q9Y2G9 1366 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms