RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 EFCAB6Q5THR3 1501 aa21.61■■□□□ 1.05
RTN1-209ENST00000611068 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
RTN1-209ENST00000611068 RTL5Q5HYW3 569 aaPredicted RBP21.6■■□□□ 1.05
RTN1-209ENST00000611068 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
RTN1-209ENST00000611068 RNF17Q9BXT8 1623 aaKnown RBP21.58■■□□□ 1.04
RTN1-209ENST00000611068 BCORL1Q5H9F3 1711 aa21.57■■□□□ 1.04
RTN1-209ENST00000611068 ABCC3O15438 1527 aa21.57■■□□□ 1.04
RTN1-209ENST00000611068 ARID4BQ4LE39 1312 aaPredicted RBP21.56■■□□□ 1.04
RTN1-209ENST00000611068 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
RTN1-209ENST00000611068 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
RTN1-209ENST00000611068 TRPM1Q7Z4N2 1603 aa21.53■■□□□ 1.04
RTN1-209ENST00000611068 PLEKHG5O94827 1062 aa21.52■■□□□ 1.04
RTN1-209ENST00000611068 IDI1Q13907 227 aa21.52■■□□□ 1.04
RTN1-209ENST00000611068 LMTK2Q8IWU2 1503 aa21.51■■□□□ 1.03
RTN1-209ENST00000611068 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
RTN1-209ENST00000611068 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
RTN1-209ENST00000611068 SIGLEC1Q9BZZ2 1709 aa21.48■■□□□ 1.03
RTN1-209ENST00000611068 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
RTN1-209ENST00000611068 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
RTN1-209ENST00000611068 NOS1P29475 1434 aa21.47■■□□□ 1.03
RTN1-209ENST00000611068 MROH2AA6NES4 1674 aa21.46■■□□□ 1.03
RTN1-209ENST00000611068 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
RTN1-209ENST00000611068 KIF1BO60333 1816 aa21.44■■□□□ 1.02
RTN1-209ENST00000611068 TESK2Q96S53 571 aa21.43■■□□□ 1.02
RTN1-209ENST00000611068 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
RTN1-209ENST00000611068 DISP3Q9P2K9 1392 aa21.43■■□□□ 1.02
RTN1-209ENST00000611068 MADDQ8WXG6 1647 aa21.43■■□□□ 1.02
RTN1-209ENST00000611068 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
RTN1-209ENST00000611068 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
RTN1-209ENST00000611068 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
RTN1-209ENST00000611068 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
RTN1-209ENST00000611068 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
RTN1-209ENST00000611068 SYNMO15061 1565 aa21.4■■□□□ 1.02
RTN1-209ENST00000611068 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
RTN1-209ENST00000611068 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
RTN1-209ENST00000611068 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
RTN1-209ENST00000611068 IPO9Q96P70 1041 aaKnown RBP21.37■■□□□ 1.01
RTN1-209ENST00000611068 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
RTN1-209ENST00000611068 ADGRB3O60242 1522 aa21.35■■□□□ 1.01
RTN1-209ENST00000611068 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
RTN1-209ENST00000611068 TMF1P82094 1093 aa21.35■■□□□ 1.01
RTN1-209ENST00000611068 CLTCQ00610 1675 aaKnown RBP21.35■■□□□ 1.01
RTN1-209ENST00000611068 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
RTN1-209ENST00000611068 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
RTN1-209ENST00000611068 STK26Q9P289 416 aa21.34■■□□□ 1.01
RTN1-209ENST00000611068 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
RTN1-209ENST00000611068 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1.01
RTN1-209ENST00000611068 ARHGAP31Q2M1Z3 1444 aa21.33■■□□□ 1.01
RTN1-209ENST00000611068 MRS2Q9HD23 443 aa21.33■■□□□ 1
RTN1-209ENST00000611068 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
RTN1-209ENST00000611068 STAC3Q96MF2 364 aa21.32■■□□□ 1
RTN1-209ENST00000611068 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
RTN1-209ENST00000611068 PANK3Q9H999 370 aa21.31■■□□□ 1
RTN1-209ENST00000611068 VGFO15240 615 aaPredicted RBP21.3■■□□□ 1
RTN1-209ENST00000611068 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
RTN1-209ENST00000611068 SCAF11Q99590 1463 aaKnown RBP21.3■■□□□ 1
RTN1-209ENST00000611068 ZMYM3Q14202 1370 aa21.3■■□□□ 1
RTN1-209ENST00000611068 PREX1Q8TCU6 1659 aa21.3■■□□□ 1
RTN1-209ENST00000611068 ANP32AP39687 249 aaKnown RBP21.29■■□□□ 1
RTN1-209ENST00000611068 CC2D1BQ5T0F9 858 aaKnown RBP21.29■■□□□ 1
RTN1-209ENST00000611068 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
RTN1-209ENST00000611068 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
RTN1-209ENST00000611068 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
RTN1-209ENST00000611068 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
RTN1-209ENST00000611068 MYOM2P54296 1465 aa21.28■■□□□ 1
RTN1-209ENST00000611068 AGLP35573 1532 aa21.28■■□□□ 1
RTN1-209ENST00000611068 ERVK-7P63135 1459 aa21.28■■□□□ 1
RTN1-209ENST00000611068 MYO5BQ9ULV0 1848 aa21.27■■□□□ 1
RTN1-209ENST00000611068 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
RTN1-209ENST00000611068 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
RTN1-209ENST00000611068 PIK3C2BO00750 1634 aa21.25■□□□□ 0.99
RTN1-209ENST00000611068 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
RTN1-209ENST00000611068 PPLO60437 1756 aa21.24■□□□□ 0.99
RTN1-209ENST00000611068 NEFMP07197 916 aa21.24■□□□□ 0.99
RTN1-209ENST00000611068 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
RTN1-209ENST00000611068 REREQ9P2R6 1566 aa21.24■□□□□ 0.99
RTN1-209ENST00000611068 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
RTN1-209ENST00000611068 LAMC1P11047 1609 aa21.23■□□□□ 0.99
RTN1-209ENST00000611068 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
RTN1-209ENST00000611068 IQGAP1P46940 1657 aa21.22■□□□□ 0.99
RTN1-209ENST00000611068 ZMYND15Q9H091 742 aa21.22■□□□□ 0.99
RTN1-209ENST00000611068 NEXMIFQ5QGS0 1516 aa21.22■□□□□ 0.99
RTN1-209ENST00000611068 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
RTN1-209ENST00000611068 NEURL4Q96JN8 1562 aa21.21■□□□□ 0.99
RTN1-209ENST00000611068 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
RTN1-209ENST00000611068 PER1O15534 1290 aaPredicted RBP21.2■□□□□ 0.98
RTN1-209ENST00000611068 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
RTN1-209ENST00000611068 TMEM131LA2VDJ0 1609 aa21.19■□□□□ 0.98
RTN1-209ENST00000611068 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
RTN1-209ENST00000611068 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
RTN1-209ENST00000611068 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
RTN1-209ENST00000611068 KIAA1210Q9ULL0 1709 aa21.13■□□□□ 0.97
RTN1-209ENST00000611068 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
RTN1-209ENST00000611068 ADGRB1O14514 1584 aa21.13■□□□□ 0.97
RTN1-209ENST00000611068 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
RTN1-209ENST00000611068 KNSTRNQ9Y448 316 aa21.12■□□□□ 0.97
RTN1-209ENST00000611068 TNRQ92752 1358 aa21.12■□□□□ 0.97
RTN1-209ENST00000611068 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
RTN1-209ENST00000611068 PRAM1Q96QH2 718 aa21.11■□□□□ 0.97
RTN1-209ENST00000611068 SLC12A5Q9H2X9 1139 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms