RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 NPATQ14207 1427 aa25.6■■□□□ 1.69
SEMA3B-210ENST00000611067 CARD11Q9BXL7 1154 aa25.6■■□□□ 1.69
SEMA3B-210ENST00000611067 REREQ9P2R6 1566 aa25.59■■□□□ 1.69
SEMA3B-210ENST00000611067 TRPM1Q7Z4N2 1603 aa25.58■■□□□ 1.69
SEMA3B-210ENST00000611067 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.69
SEMA3B-210ENST00000611067 COL17A1Q9UMD9 1497 aaPredicted RBP25.57■■□□□ 1.68
SEMA3B-210ENST00000611067 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
SEMA3B-210ENST00000611067 KIF1BO60333 1816 aa25.56■■□□□ 1.68
SEMA3B-210ENST00000611067 UGGT1Q9NYU2 1555 aa25.56■■□□□ 1.68
SEMA3B-210ENST00000611067 CFAP65Q6ZU64 1925 aaKnown RBP25.55■■□□□ 1.68
SEMA3B-210ENST00000611067 ARHGEF40Q8TER5 1519 aa25.54■■□□□ 1.68
SEMA3B-210ENST00000611067 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
SEMA3B-210ENST00000611067 AGLP35573 1532 aa25.53■■□□□ 1.68
SEMA3B-210ENST00000611067 ARID4BQ4LE39 1312 aaPredicted RBP25.52■■□□□ 1.68
SEMA3B-210ENST00000611067 ZBTB47Q9UFB7 747 aaPredicted RBP25.52■■□□□ 1.68
SEMA3B-210ENST00000611067 ARHGAP31Q2M1Z3 1444 aa25.5■■□□□ 1.67
SEMA3B-210ENST00000611067 RTL5Q5HYW3 569 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-210ENST00000611067 MADDQ8WXG6 1647 aa25.48■■□□□ 1.67
SEMA3B-210ENST00000611067 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
SEMA3B-210ENST00000611067 GPRASP1Q5JY77 1395 aa25.47■■□□□ 1.67
SEMA3B-210ENST00000611067 LAMC1P11047 1609 aa25.46■■□□□ 1.67
SEMA3B-210ENST00000611067 NOS1P29475 1434 aa25.46■■□□□ 1.67
SEMA3B-210ENST00000611067 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
SEMA3B-210ENST00000611067 MROH2AA6NES4 1674 aa25.45■■□□□ 1.66
SEMA3B-210ENST00000611067 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
SEMA3B-210ENST00000611067 ADGRB3O60242 1522 aa25.44■■□□□ 1.66
SEMA3B-210ENST00000611067 PPP6R1Q9UPN7 881 aa25.44■■□□□ 1.66
SEMA3B-210ENST00000611067 CHGAP10645 457 aaKnown RBP25.43■■□□□ 1.66
SEMA3B-210ENST00000611067 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
SEMA3B-210ENST00000611067 MYOM2P54296 1465 aa25.41■■□□□ 1.66
SEMA3B-210ENST00000611067 SYNMO15061 1565 aa25.41■■□□□ 1.66
SEMA3B-210ENST00000611067 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
SEMA3B-210ENST00000611067 TMC1Q8TDI8 760 aa25.4■■□□□ 1.66
SEMA3B-210ENST00000611067 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
SEMA3B-210ENST00000611067 PIK3C2BO00750 1634 aa25.39■■□□□ 1.66
SEMA3B-210ENST00000611067 CNGB1Q14028 1251 aaPredicted RBP25.39■■□□□ 1.65
SEMA3B-210ENST00000611067 PREX1Q8TCU6 1659 aa25.39■■□□□ 1.65
SEMA3B-210ENST00000611067 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.65
SEMA3B-210ENST00000611067 POLR3GLQ9BT43 218 aa25.38■■□□□ 1.65
SEMA3B-210ENST00000611067 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
SEMA3B-210ENST00000611067 MLECQ14165 292 aa25.36■■□□□ 1.65
SEMA3B-210ENST00000611067 KIAA1210Q9ULL0 1709 aa25.35■■□□□ 1.65
SEMA3B-210ENST00000611067 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
SEMA3B-210ENST00000611067 SLC52A1Q9NWF4 448 aa25.34■■□□□ 1.65
SEMA3B-210ENST00000611067 RRP1P56182 461 aaKnown RBP25.33■■□□□ 1.65
SEMA3B-210ENST00000611067 BRD4O60885 1362 aaPredicted RBP25.33■■□□□ 1.65
SEMA3B-210ENST00000611067 KTN1Q86UP2 1357 aaKnown RBP25.33■■□□□ 1.65
SEMA3B-210ENST00000611067 PPLO60437 1756 aa25.32■■□□□ 1.64
SEMA3B-210ENST00000611067 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
SEMA3B-210ENST00000611067 ADGRF5Q8IZF2 1346 aa25.31■■□□□ 1.64
SEMA3B-210ENST00000611067 ESF1Q9H501 851 aaKnown RBP25.3■■□□□ 1.64
SEMA3B-210ENST00000611067 ERVK-7P63135 1459 aa25.3■■□□□ 1.64
SEMA3B-210ENST00000611067 NRXN1Q9ULB1 1477 aa25.29■■□□□ 1.64
SEMA3B-210ENST00000611067 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
SEMA3B-210ENST00000611067 IDI1Q13907 227 aa25.29■■□□□ 1.64
SEMA3B-210ENST00000611067 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
SEMA3B-210ENST00000611067 IQGAP1P46940 1657 aa25.28■■□□□ 1.64
SEMA3B-210ENST00000611067 SENP3-EIF4A1A0A087X0R7 540 aa25.28■■□□□ 1.64
SEMA3B-210ENST00000611067 RALBP1Q15311 655 aa25.27■■□□□ 1.64
SEMA3B-210ENST00000611067 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
SEMA3B-210ENST00000611067 EXOC6Q8TAG9 804 aa25.26■■□□□ 1.63
SEMA3B-210ENST00000611067 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
SEMA3B-210ENST00000611067 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
SEMA3B-210ENST00000611067 MS4A1P11836 297 aa25.24■■□□□ 1.63
SEMA3B-210ENST00000611067 PDE4AP27815 886 aa25.24■■□□□ 1.63
SEMA3B-210ENST00000611067 CFAP70Q5T0N1 1121 aa25.24■■□□□ 1.63
SEMA3B-210ENST00000611067 RCAN3Q9UKA8 241 aa25.24■■□□□ 1.63
SEMA3B-210ENST00000611067 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
SEMA3B-210ENST00000611067 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
SEMA3B-210ENST00000611067 BACH2Q9BYV9 841 aa25.22■■□□□ 1.63
SEMA3B-210ENST00000611067 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
SEMA3B-210ENST00000611067 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
SEMA3B-210ENST00000611067 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
SEMA3B-210ENST00000611067 TMEM131LA2VDJ0 1609 aa25.21■■□□□ 1.63
SEMA3B-210ENST00000611067 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
SEMA3B-210ENST00000611067 VGFO15240 615 aaPredicted RBP25.2■■□□□ 1.63
SEMA3B-210ENST00000611067 TESK2Q96S53 571 aa25.2■■□□□ 1.63
SEMA3B-210ENST00000611067 MYO5BQ9ULV0 1848 aa25.2■■□□□ 1.62
SEMA3B-210ENST00000611067 TMF1P82094 1093 aa25.19■■□□□ 1.62
SEMA3B-210ENST00000611067 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
SEMA3B-210ENST00000611067 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
SEMA3B-210ENST00000611067 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
SEMA3B-210ENST00000611067 NEFMP07197 916 aa25.16■■□□□ 1.62
SEMA3B-210ENST00000611067 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
SEMA3B-210ENST00000611067 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
SEMA3B-210ENST00000611067 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
SEMA3B-210ENST00000611067 NUTM2DQ5VT03 806 aaPredicted RBP25.14■■□□□ 1.61
SEMA3B-210ENST00000611067 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
SEMA3B-210ENST00000611067 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
SEMA3B-210ENST00000611067 LAS1LQ9Y4W2 734 aaKnown RBP25.12■■□□□ 1.61
SEMA3B-210ENST00000611067 IL27Q8NEV9 243 aa25.11■■□□□ 1.61
SEMA3B-210ENST00000611067 PARD3Q8TEW0 1356 aa25.11■■□□□ 1.61
SEMA3B-210ENST00000611067 ADGRB1O14514 1584 aa25.08■■□□□ 1.61
SEMA3B-210ENST00000611067 SLC24A1O60721 1099 aa25.08■■□□□ 1.61
SEMA3B-210ENST00000611067 CDCA8Q53HL2 280 aa25.07■■□□□ 1.6
SEMA3B-210ENST00000611067 PRKCSHP14314 528 aaPredicted RBP25.07■■□□□ 1.6
SEMA3B-210ENST00000611067 ANO8Q9HCE9 1232 aaPredicted RBP25.07■■□□□ 1.6
SEMA3B-210ENST00000611067 A2ML1A8K2U0 1454 aa25.06■■□□□ 1.6
SEMA3B-210ENST00000611067 INSRP06213 1382 aa25.05■■□□□ 1.6
SEMA3B-210ENST00000611067 DDRGK1Q96HY6 314 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms