RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-224ENST00000610907 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
PABPC1-224ENST00000610907 PANK3Q9H999 370 aa14.05□□□□□ -0.16
PABPC1-224ENST00000610907 PDE3BQ13370 1112 aa14.04□□□□□ -0.16
PABPC1-224ENST00000610907 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
PABPC1-224ENST00000610907 KIF1BO60333 1816 aa14.03□□□□□ -0.16
PABPC1-224ENST00000610907 IRX6P78412 446 aaPredicted RBP14.02□□□□□ -0.16
PABPC1-224ENST00000610907 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
PABPC1-224ENST00000610907 NEO1Q92859 1461 aa14.01□□□□□ -0.17
PABPC1-224ENST00000610907 SYNMO15061 1565 aa14□□□□□ -0.17
PABPC1-224ENST00000610907 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
PABPC1-224ENST00000610907 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
PABPC1-224ENST00000610907 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
PABPC1-224ENST00000610907 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
PABPC1-224ENST00000610907 PPRC1Q5VV67 1664 aaKnown RBP13.99□□□□□ -0.17
PABPC1-224ENST00000610907 IFT172Q9UG01 1749 aa13.98□□□□□ -0.17
PABPC1-224ENST00000610907 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
PABPC1-224ENST00000610907 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
PABPC1-224ENST00000610907 BLMP54132 1417 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-224ENST00000610907 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
PABPC1-224ENST00000610907 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
PABPC1-224ENST00000610907 ADGRB3O60242 1522 aa13.96□□□□□ -0.18
PABPC1-224ENST00000610907 SBNO2Q9Y2G9 1366 aa13.95□□□□□ -0.18
PABPC1-224ENST00000610907 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
PABPC1-224ENST00000610907 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
PABPC1-224ENST00000610907 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
PABPC1-224ENST00000610907 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-224ENST00000610907 KDM5AP29375 1690 aaKnown RBP13.94□□□□□ -0.18
PABPC1-224ENST00000610907 ADGRF5Q8IZF2 1346 aa13.94□□□□□ -0.18
PABPC1-224ENST00000610907 NPATQ14207 1427 aa13.94□□□□□ -0.18
PABPC1-224ENST00000610907 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
PABPC1-224ENST00000610907 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
PABPC1-224ENST00000610907 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
PABPC1-224ENST00000610907 ABCC3O15438 1527 aa13.92□□□□□ -0.18
PABPC1-224ENST00000610907 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
PABPC1-224ENST00000610907 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
PABPC1-224ENST00000610907 MYOM1P52179 1685 aa13.91□□□□□ -0.18
PABPC1-224ENST00000610907 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
PABPC1-224ENST00000610907 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
PABPC1-224ENST00000610907 NOS1P29475 1434 aa13.9□□□□□ -0.18
PABPC1-224ENST00000610907 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
PABPC1-224ENST00000610907 GGT6Q6P531 493 aa13.9□□□□□ -0.18
PABPC1-224ENST00000610907 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-224ENST00000610907 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
PABPC1-224ENST00000610907 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
PABPC1-224ENST00000610907 PPLO60437 1756 aa13.89□□□□□ -0.19
PABPC1-224ENST00000610907 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
PABPC1-224ENST00000610907 GLI2P10070 1586 aa13.88□□□□□ -0.19
PABPC1-224ENST00000610907 RRP1P56182 461 aaKnown RBP13.88□□□□□ -0.19
PABPC1-224ENST00000610907 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
PABPC1-224ENST00000610907 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
PABPC1-224ENST00000610907 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
PABPC1-224ENST00000610907 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
PABPC1-224ENST00000610907 ZC3H13Q5T200 1668 aaKnown RBP13.87□□□□□ -0.19
PABPC1-224ENST00000610907 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
PABPC1-224ENST00000610907 CENPJQ9HC77 1338 aaPredicted RBP13.87□□□□□ -0.19
PABPC1-224ENST00000610907 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
PABPC1-224ENST00000610907 CCDC136Q96JN2 1154 aa13.86□□□□□ -0.19
PABPC1-224ENST00000610907 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
PABPC1-224ENST00000610907 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-224ENST00000610907 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
PABPC1-224ENST00000610907 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
PABPC1-224ENST00000610907 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
PABPC1-224ENST00000610907 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
PABPC1-224ENST00000610907 ADGRB1O14514 1584 aa13.84□□□□□ -0.19
PABPC1-224ENST00000610907 SLC52A1Q9NWF4 448 aa13.83□□□□□ -0.19
PABPC1-224ENST00000610907 ZFYVE9O95405 1425 aa13.83□□□□□ -0.19
PABPC1-224ENST00000610907 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-224ENST00000610907 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
PABPC1-224ENST00000610907 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
PABPC1-224ENST00000610907 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
PABPC1-224ENST00000610907 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
PABPC1-224ENST00000610907 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
PABPC1-224ENST00000610907 ZNF521Q96K83 1311 aa13.8□□□□□ -0.2
PABPC1-224ENST00000610907 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
PABPC1-224ENST00000610907 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
PABPC1-224ENST00000610907 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
PABPC1-224ENST00000610907 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
PABPC1-224ENST00000610907 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-224ENST00000610907 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
PABPC1-224ENST00000610907 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.2
PABPC1-224ENST00000610907 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
PABPC1-224ENST00000610907 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
PABPC1-224ENST00000610907 EVC2Q86UK5 1308 aa13.76□□□□□ -0.21
PABPC1-224ENST00000610907 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
PABPC1-224ENST00000610907 IDI1Q13907 227 aa13.75□□□□□ -0.21
PABPC1-224ENST00000610907 EXOC6Q8TAG9 804 aa13.75□□□□□ -0.21
PABPC1-224ENST00000610907 REREQ9P2R6 1566 aa13.75□□□□□ -0.21
PABPC1-224ENST00000610907 DUSP27Q5VZP5 1158 aa13.75□□□□□ -0.21
PABPC1-224ENST00000610907 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
PABPC1-224ENST00000610907 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
PABPC1-224ENST00000610907 TRMT2AQ8IZ69 625 aaKnown RBP13.74□□□□□ -0.21
PABPC1-224ENST00000610907 NSD2O96028 1365 aa13.74□□□□□ -0.21
PABPC1-224ENST00000610907 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
PABPC1-224ENST00000610907 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
PABPC1-224ENST00000610907 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-224ENST00000610907 PREX1Q8TCU6 1659 aa13.73□□□□□ -0.21
PABPC1-224ENST00000610907 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
PABPC1-224ENST00000610907 AGLP35573 1532 aa13.73□□□□□ -0.21
PABPC1-224ENST00000610907 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms