RNA–Protein interactions for RNA: ENST00000610852.1

PDE4DIP-238, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-238	ENST00000610852	MYOM2	P54296	1465 aa		12.56	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	IFT172	Q9UG01	1749 aa		12.56	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	TMEM2	Q9UHN6	1383 aa		12.56	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	SETD1B	Q9UPS6	1966 aa	Known RBP	12.55	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	MYO5B	Q9ULV0	1848 aa		12.55	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	ZFYVE9	O95405	1425 aa		12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	RIMS2	Q9UQ26	1411 aa		12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	ARHGAP23	Q9P227	1491 aa		12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	PPL	O60437	1756 aa		12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	SLIT1	O75093	1534 aa		12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	VGF	O15240	615 aa	Predicted RBP	12.54	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	HDGF	P51858	240 aa	Known RBP	12.53	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	ADGRF5	Q8IZF2	1346 aa		12.53	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	PRAG1	Q86YV5	1406 aa		12.53	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	NRXN1	Q9ULB1	1477 aa		12.53	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	NBPF8	Q3BBV2	869 aa		12.52	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.51	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	LTK	P29376	864 aa		12.5	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	EID1	Q9Y6B2	187 aa		12.5	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	PIK3C2G	O75747	1445 aa		12.5	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	LMTK3	Q96Q04	1460 aa		12.5	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	TXNDC2	Q86VQ3	553 aa		12.49	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	SCAF11	Q99590	1463 aa	Known RBP	12.48	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	ANKLE2	Q86XL3	938 aa		12.48	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	RALGAPB	Q86X10	1494 aa		12.47	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	PLEKHG1	Q9ULL1	1385 aa		12.47	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	C14orf93	Q9H972	538 aa	Known RBP	12.46	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	TRPM1	Q7Z4N2	1603 aa		12.46	□□□□□ -0.41
PDE4DIP-238	ENST00000610852	SETBP1	Q9Y6X0	1596 aa		12.46	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	CFAP70	Q5T0N1	1121 aa		12.45	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	KIAA1210	Q9ULL0	1709 aa		12.45	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	HSPA2	P54652	639 aa		12.44	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	NBPF1	Q3BBV0	1214 aa		12.44	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	LAMC1	P11047	1609 aa		12.44	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	NRXN3	Q9Y4C0	1643 aa		12.44	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	ROCK2	O75116	1388 aa	Known RBP	12.43	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	GPRASP1	Q5JY77	1395 aa		12.43	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	MED14	O60244	1454 aa		12.43	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	ALK	Q9UM73	1620 aa		12.43	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	ADAMTS13	Q76LX8	1427 aa		12.43	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	NCKAP5L	Q9HCH0	1330 aa		12.42	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	BCAN	Q96GW7	911 aa		12.42	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	SENP3	Q9H4L4	574 aa	Predicted RBP	12.42	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	IQGAP1	P46940	1657 aa		12.42	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	ADGRB1	O14514	1584 aa		12.41	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	NPHP4	O75161	1426 aa	Predicted RBP	12.41	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	POLR1A	O95602	1720 aa	Predicted RBP	12.41	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	CARD11	Q9BXL7	1154 aa		12.41	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	TBX22	Q9Y458	520 aa		12.4	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	ASXL1	Q8IXJ9	1541 aa		12.4	□□□□□ -0.42
PDE4DIP-238	ENST00000610852	SETD1A	O15047	1707 aa	Known RBP	12.4	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	DIP2A	Q14689	1571 aa		12.39	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	TMEM132E	Q6IEE7	984 aa		12.39	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	SLC26A8	Q96RN1	970 aa		12.39	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	MET	P08581	1390 aa		12.38	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	USP47	Q96K76	1375 aa		12.37	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.37	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	STRC	Q7RTU9	1775 aa		12.36	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	PIK3R4	Q99570	1358 aa		12.36	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	LRPPRC	P42704	1394 aa	Known RBP	12.35	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	HSPA5	P11021	654 aa	Known RBP	12.35	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	ABCC11	Q96J66	1382 aa		12.34	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	STK26	Q9P289	416 aa		12.34	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	PTPRU	Q92729	1446 aa		12.34	□□□□□ -0.43
PDE4DIP-238	ENST00000610852	EIF3A	Q14152	1382 aa	Known RBP	12.33	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	TRAK1	Q9UPV9	953 aa		12.33	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	TECPR2	O15040	1411 aa		12.33	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	DMRT2	Q9Y5R5	561 aa		12.32	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	DLC1	Q96QB1	1528 aa		12.32	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	ST20-MTHFS	A0A0A6YYL1	179 aa		12.31	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	SIRT1	Q96EB6	747 aa		12.31	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	AMOTL2	Q9Y2J4	779 aa		12.31	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	KNDC1	Q76NI1	1749 aa		12.31	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.3	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	XRN1	Q8IZH2	1706 aa	Known RBP	12.3	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	CPS1	P31327	1500 aa		12.3	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	FAM135B	Q49AJ0	1406 aa		12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	KCNA6	P17658	529 aa		12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	PRAM1	Q96QH2	718 aa		12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	NWD1	Q149M9	1564 aa		12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	ROBO2	Q9HCK4	1378 aa		12.29	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	PTCH1	Q13635	1447 aa		12.28	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	CHD2	O14647	1828 aa	Known RBP	12.28	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	TESK2	Q96S53	571 aa		12.28	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	SBNO2	Q9Y2G9	1366 aa		12.28	□□□□□ -0.44
PDE4DIP-238	ENST00000610852	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.27	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	WAPL	Q7Z5K2	1190 aa		12.27	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	POGK	Q9P215	609 aa		12.27	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	PLEKHH1	Q9ULM0	1364 aa		12.26	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	NKTR	P30414	1462 aa	Known RBP	12.26	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	SLC24A1	O60721	1099 aa		12.25	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	QRICH2	Q9H0J4	1663 aa		12.25	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.24	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.23	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	TMF1	P82094	1093 aa		12.23	□□□□□ -0.45
PDE4DIP-238	ENST00000610852	DISP3	Q9P2K9	1392 aa		12.22	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms