RNA–Protein interactions for RNA: ENST00000610559.4

DDX3X-207, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 4

Gene DDX3X, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-207ENST00000610559 LHX6Q9UPM6 363 aa14.07□□□□□ -0.16
DDX3X-207ENST00000610559 MYSM1Q5VVJ2 828 aa14.06□□□□□ -0.16
DDX3X-207ENST00000610559 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
DDX3X-207ENST00000610559 COL9A1P20849 921 aa14.05□□□□□ -0.16
DDX3X-207ENST00000610559 CLUAP1Q96AJ1 413 aa14.05□□□□□ -0.16
DDX3X-207ENST00000610559 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
DDX3X-207ENST00000610559 UBTFP17480 764 aaKnown RBP14.04□□□□□ -0.16
DDX3X-207ENST00000610559 MCM6Q14566 821 aa14.04□□□□□ -0.16
DDX3X-207ENST00000610559 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
DDX3X-207ENST00000610559 CFTRP13569 1480 aa14.04□□□□□ -0.16
DDX3X-207ENST00000610559 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
DDX3X-207ENST00000610559 A6NJR5 290 aa14.03□□□□□ -0.16
DDX3X-207ENST00000610559 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDX3X-207ENST00000610559 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
DDX3X-207ENST00000610559 EYA1Q99502 592 aa14.02□□□□□ -0.17
DDX3X-207ENST00000610559 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
DDX3X-207ENST00000610559 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 APBB1O00213 710 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
DDX3X-207ENST00000610559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14□□□□□ -0.17
DDX3X-207ENST00000610559 RCCD1A6NED2 376 aa14□□□□□ -0.17
DDX3X-207ENST00000610559 ARID3AQ99856 593 aa14□□□□□ -0.17
DDX3X-207ENST00000610559 TSKSQ9UJT2 592 aa14□□□□□ -0.17
DDX3X-207ENST00000610559 CLK2P49760 499 aaKnown RBP13.99□□□□□ -0.17
DDX3X-207ENST00000610559 C3orf80F5H4A9 247 aa13.98□□□□□ -0.17
DDX3X-207ENST00000610559 TRAK2O60296 914 aa13.98□□□□□ -0.17
DDX3X-207ENST00000610559 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
DDX3X-207ENST00000610559 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
DDX3X-207ENST00000610559 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
DDX3X-207ENST00000610559 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
DDX3X-207ENST00000610559 NUDT18Q6ZVK8 323 aa13.95□□□□□ -0.18
DDX3X-207ENST00000610559 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
DDX3X-207ENST00000610559 CD46P15529 392 aa13.94□□□□□ -0.18
DDX3X-207ENST00000610559 PTPREP23469 700 aa13.94□□□□□ -0.18
DDX3X-207ENST00000610559 FBXO31Q5XUX0 539 aaPredicted RBP13.94□□□□□ -0.18
DDX3X-207ENST00000610559 SPIRE2Q8WWL2 714 aa13.94□□□□□ -0.18
DDX3X-207ENST00000610559 LIMD1Q9UGP4 676 aa13.94□□□□□ -0.18
DDX3X-207ENST00000610559 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
DDX3X-207ENST00000610559 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
DDX3X-207ENST00000610559 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
DDX3X-207ENST00000610559 TATDN2Q93075 761 aa13.92□□□□□ -0.18
DDX3X-207ENST00000610559 RFC5P40937 340 aa13.91□□□□□ -0.18
DDX3X-207ENST00000610559 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
DDX3X-207ENST00000610559 POM121Q96HA1 1249 aa13.91□□□□□ -0.18
DDX3X-207ENST00000610559 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
DDX3X-207ENST00000610559 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
DDX3X-207ENST00000610559 ARHGEF11O15085 1522 aa13.9□□□□□ -0.19
DDX3X-207ENST00000610559 DNAJB2P25686 324 aa13.89□□□□□ -0.19
DDX3X-207ENST00000610559 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
DDX3X-207ENST00000610559 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
DDX3X-207ENST00000610559 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
DDX3X-207ENST00000610559 PPP2R2DQ66LE6 453 aa13.88□□□□□ -0.19
DDX3X-207ENST00000610559 SULF1Q8IWU6 871 aa13.88□□□□□ -0.19
DDX3X-207ENST00000610559 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
DDX3X-207ENST00000610559 PACS2Q86VP3 889 aa13.87□□□□□ -0.19
DDX3X-207ENST00000610559 BANK1Q8NDB2 785 aa13.87□□□□□ -0.19
DDX3X-207ENST00000610559 TMEM134Q9H6X4 195 aa13.87□□□□□ -0.19
DDX3X-207ENST00000610559 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
DDX3X-207ENST00000610559 SPTLC1O15269 473 aa13.86□□□□□ -0.19
DDX3X-207ENST00000610559 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
DDX3X-207ENST00000610559 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
DDX3X-207ENST00000610559 CHD1O14646 1710 aa13.85□□□□□ -0.19
DDX3X-207ENST00000610559 TUSC1Q2TAM9 212 aa13.85□□□□□ -0.19
DDX3X-207ENST00000610559 NUTM1Q86Y26 1132 aa13.85□□□□□ -0.19
DDX3X-207ENST00000610559 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
DDX3X-207ENST00000610559 MOXD2PA6NHM9 499 aa13.84□□□□□ -0.19
DDX3X-207ENST00000610559 RAD21O60216 631 aa13.84□□□□□ -0.19
DDX3X-207ENST00000610559 PROX2Q3B8N5 592 aa13.84□□□□□ -0.19
DDX3X-207ENST00000610559 TMEM259Q4ZIN3 620 aa13.84□□□□□ -0.19
DDX3X-207ENST00000610559 RSBN1LQ6PCB5 846 aaPredicted RBP13.84□□□□□ -0.19
DDX3X-207ENST00000610559 SMAPO00193 183 aa13.83□□□□□ -0.2
DDX3X-207ENST00000610559 SNPHO15079 494 aa13.83□□□□□ -0.2
DDX3X-207ENST00000610559 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
DDX3X-207ENST00000610559 COG6Q9Y2V7 657 aa13.83□□□□□ -0.2
DDX3X-207ENST00000610559 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
DDX3X-207ENST00000610559 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
DDX3X-207ENST00000610559 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
DDX3X-207ENST00000610559 NDUFV2P19404 249 aa13.81□□□□□ -0.2
DDX3X-207ENST00000610559 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
DDX3X-207ENST00000610559 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
DDX3X-207ENST00000610559 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
DDX3X-207ENST00000610559 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
DDX3X-207ENST00000610559 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
DDX3X-207ENST00000610559 LILRB3O75022 631 aa13.77□□□□□ -0.21
DDX3X-207ENST00000610559 GJA5P36382 358 aa13.77□□□□□ -0.21
DDX3X-207ENST00000610559 QPCTQ16769 361 aa13.77□□□□□ -0.21
DDX3X-207ENST00000610559 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
DDX3X-207ENST00000610559 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
DDX3X-207ENST00000610559 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
DDX3X-207ENST00000610559 KIAA1468Q9P260 1216 aa13.76□□□□□ -0.21
DDX3X-207ENST00000610559 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
DDX3X-207ENST00000610559 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
DDX3X-207ENST00000610559 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
DDX3X-207ENST00000610559 MTMR14Q8NCE2 650 aa13.74□□□□□ -0.21
DDX3X-207ENST00000610559 KDM4AO75164 1064 aa13.73□□□□□ -0.21
DDX3X-207ENST00000610559 GCGRP47871 477 aa13.72□□□□□ -0.21
DDX3X-207ENST00000610559 PSEN2P49810 448 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms