RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ADAMTS8Q9UP79 889 aa17.7■□□□□ 0.42
PCDHB16-201ENST00000609684 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
PCDHB16-201ENST00000609684 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
PCDHB16-201ENST00000609684 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
PCDHB16-201ENST00000609684 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
PCDHB16-201ENST00000609684 C9orf84Q5VXU9 1444 aa17.68■□□□□ 0.42
PCDHB16-201ENST00000609684 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
PCDHB16-201ENST00000609684 TEFQ10587 303 aa17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 ISY1Q9ULR0 285 aaKnown RBP17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
PCDHB16-201ENST00000609684 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
PCDHB16-201ENST00000609684 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
PCDHB16-201ENST00000609684 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
PCDHB16-201ENST00000609684 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
PCDHB16-201ENST00000609684 USP35Q9P2H5 1018 aa17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 HMOX1P09601 288 aa17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
PCDHB16-201ENST00000609684 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.42
PCDHB16-201ENST00000609684 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
PCDHB16-201ENST00000609684 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.41
PCDHB16-201ENST00000609684 MTHFSP49914 203 aa17.63■□□□□ 0.41
PCDHB16-201ENST00000609684 PPP2R1AP30153 589 aa17.63■□□□□ 0.41
PCDHB16-201ENST00000609684 PANK1Q8TE04 598 aa17.63■□□□□ 0.41
PCDHB16-201ENST00000609684 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
PCDHB16-201ENST00000609684 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
PCDHB16-201ENST00000609684 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 DDX11L8A8MPP1 907 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 GNAI1P63096 354 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 DAPK1P53355 1430 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
PCDHB16-201ENST00000609684 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
PCDHB16-201ENST00000609684 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
PCDHB16-201ENST00000609684 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.41
PCDHB16-201ENST00000609684 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
PCDHB16-201ENST00000609684 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
PCDHB16-201ENST00000609684 LNPKQ9C0E8 428 aa17.57■□□□□ 0.4
PCDHB16-201ENST00000609684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
PCDHB16-201ENST00000609684 PSME1Q06323 249 aa17.57■□□□□ 0.4
PCDHB16-201ENST00000609684 NAIPQ13075 1403 aa17.57■□□□□ 0.4
PCDHB16-201ENST00000609684 SUPT6HQ7KZ85 1726 aaKnown RBP17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 NEXNQ0ZGT2 675 aa17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 REC8O95072 547 aa17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 TSPYL4Q9UJ04 414 aa17.56■□□□□ 0.4
PCDHB16-201ENST00000609684 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 PLEKHH2Q8IVE3 1493 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 GSE1Q14687 1217 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
PCDHB16-201ENST00000609684 PNISRQ8TF01 805 aaKnown RBP17.54■□□□□ 0.4
PCDHB16-201ENST00000609684 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
PCDHB16-201ENST00000609684 FOXD4L6Q3SYB3 417 aaPredicted RBP17.54■□□□□ 0.4
PCDHB16-201ENST00000609684 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
PCDHB16-201ENST00000609684 FOXD4L3Q6VB84 417 aaPredicted RBP17.54■□□□□ 0.4
PCDHB16-201ENST00000609684 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
PCDHB16-201ENST00000609684 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
PCDHB16-201ENST00000609684 AAMPQ13685 434 aa17.53■□□□□ 0.4
PCDHB16-201ENST00000609684 KIF3AQ9Y496 699 aa17.53■□□□□ 0.4
PCDHB16-201ENST00000609684 PHF14O94880 888 aa17.52■□□□□ 0.4
PCDHB16-201ENST00000609684 PRAM1Q96QH2 718 aa17.52■□□□□ 0.39
PCDHB16-201ENST00000609684 PCF11O94913 1555 aaKnown RBP17.51■□□□□ 0.39
PCDHB16-201ENST00000609684 AKNAQ7Z591 1439 aa17.51■□□□□ 0.39
PCDHB16-201ENST00000609684 NUTM2GQ5VZR2 741 aa17.51■□□□□ 0.39
PCDHB16-201ENST00000609684 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
PCDHB16-201ENST00000609684 FRAT2O75474 233 aaPredicted RBP17.5■□□□□ 0.39
PCDHB16-201ENST00000609684 EVA1CP58658 441 aa17.5■□□□□ 0.39
PCDHB16-201ENST00000609684 TPM4P67936 248 aa17.5■□□□□ 0.39
PCDHB16-201ENST00000609684 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 NLRP6P59044 892 aa17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 SKOR2Q2VWA4 1001 aaPredicted RBP17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 CCDC34Q96HJ3 373 aa17.49■□□□□ 0.39
PCDHB16-201ENST00000609684 EXOSC9Q06265 439 aaKnown RBP17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 H3BQV1 296 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 C22orf23Q9BZE7 217 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
PCDHB16-201ENST00000609684 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
PCDHB16-201ENST00000609684 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
PCDHB16-201ENST00000609684 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
PCDHB16-201ENST00000609684 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
PCDHB16-201ENST00000609684 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
PCDHB16-201ENST00000609684 ARID3AQ99856 593 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms