RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 TXNDC2Q86VQ3 553 aa22.04■■□□□ 1.12
CSNK2A1-209ENST00000609606 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
CSNK2A1-209ENST00000609606 LTKP29376 864 aa22.02■■□□□ 1.12
CSNK2A1-209ENST00000609606 HDGFP51858 240 aaKnown RBP22.02■■□□□ 1.12
CSNK2A1-209ENST00000609606 NPHP4O75161 1426 aaPredicted RBP22.02■■□□□ 1.12
CSNK2A1-209ENST00000609606 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
CSNK2A1-209ENST00000609606 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
CSNK2A1-209ENST00000609606 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
CSNK2A1-209ENST00000609606 SPATA31E1Q6ZUB1 1445 aa21.99■■□□□ 1.11
CSNK2A1-209ENST00000609606 DHX57Q6P158 1386 aaKnown RBP21.97■■□□□ 1.11
CSNK2A1-209ENST00000609606 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
CSNK2A1-209ENST00000609606 ZNF326Q5BKZ1 582 aaKnown RBP21.96■■□□□ 1.11
CSNK2A1-209ENST00000609606 RPGRIP1LQ68CZ1 1315 aa21.96■■□□□ 1.11
CSNK2A1-209ENST00000609606 PLEKHG1Q9ULL1 1385 aa21.95■■□□□ 1.1
CSNK2A1-209ENST00000609606 PPLO60437 1756 aa21.94■■□□□ 1.1
CSNK2A1-209ENST00000609606 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
CSNK2A1-209ENST00000609606 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
CSNK2A1-209ENST00000609606 SETBP1Q9Y6X0 1596 aa21.88■■□□□ 1.09
CSNK2A1-209ENST00000609606 VGFO15240 615 aaPredicted RBP21.88■■□□□ 1.09
CSNK2A1-209ENST00000609606 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
CSNK2A1-209ENST00000609606 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
CSNK2A1-209ENST00000609606 RGL3Q3MIN7 710 aa21.87■■□□□ 1.09
CSNK2A1-209ENST00000609606 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
CSNK2A1-209ENST00000609606 ADAMTS13Q76LX8 1427 aa21.85■■□□□ 1.09
CSNK2A1-209ENST00000609606 LTBP4Q8N2S1 1624 aa21.84■■□□□ 1.09
CSNK2A1-209ENST00000609606 BCANQ96GW7 911 aa21.83■■□□□ 1.09
CSNK2A1-209ENST00000609606 TBX22Q9Y458 520 aa21.83■■□□□ 1.09
CSNK2A1-209ENST00000609606 ZNF335Q9H4Z2 1342 aaPredicted RBP21.82■■□□□ 1.08
CSNK2A1-209ENST00000609606 ADRA2BP18089 450 aa21.82■■□□□ 1.08
CSNK2A1-209ENST00000609606 SLC26A8Q96RN1 970 aa21.82■■□□□ 1.08
CSNK2A1-209ENST00000609606 MYOM2P54296 1465 aa21.82■■□□□ 1.08
CSNK2A1-209ENST00000609606 STAC3Q96MF2 364 aa21.8■■□□□ 1.08
CSNK2A1-209ENST00000609606 STRCP1A6NGW2 1772 aa21.79■■□□□ 1.08
CSNK2A1-209ENST00000609606 PIK3R4Q99570 1358 aa21.79■■□□□ 1.08
CSNK2A1-209ENST00000609606 CHD2O14647 1828 aaKnown RBP21.79■■□□□ 1.08
CSNK2A1-209ENST00000609606 CPS1P31327 1500 aa21.79■■□□□ 1.08
CSNK2A1-209ENST00000609606 NRXN1Q9ULB1 1477 aa21.78■■□□□ 1.08
CSNK2A1-209ENST00000609606 ADGRF5Q8IZF2 1346 aa21.78■■□□□ 1.08
CSNK2A1-209ENST00000609606 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
CSNK2A1-209ENST00000609606 NWD1Q149M9 1564 aa21.77■■□□□ 1.08
CSNK2A1-209ENST00000609606 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
CSNK2A1-209ENST00000609606 ALKQ9UM73 1620 aa21.76■■□□□ 1.07
CSNK2A1-209ENST00000609606 KCNA6P17658 529 aa21.75■■□□□ 1.07
CSNK2A1-209ENST00000609606 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
CSNK2A1-209ENST00000609606 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
CSNK2A1-209ENST00000609606 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
CSNK2A1-209ENST00000609606 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
CSNK2A1-209ENST00000609606 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
CSNK2A1-209ENST00000609606 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
CSNK2A1-209ENST00000609606 LAMC1P11047 1609 aa21.72■■□□□ 1.07
CSNK2A1-209ENST00000609606 METP08581 1390 aa21.71■■□□□ 1.07
CSNK2A1-209ENST00000609606 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
CSNK2A1-209ENST00000609606 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
CSNK2A1-209ENST00000609606 MSH5O43196 834 aa21.68■■□□□ 1.06
CSNK2A1-209ENST00000609606 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
CSNK2A1-209ENST00000609606 LRRC7Q96NW7 1537 aa21.68■■□□□ 1.06
CSNK2A1-209ENST00000609606 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
CSNK2A1-209ENST00000609606 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
CSNK2A1-209ENST00000609606 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
CSNK2A1-209ENST00000609606 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
CSNK2A1-209ENST00000609606 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
CSNK2A1-209ENST00000609606 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.06
CSNK2A1-209ENST00000609606 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
CSNK2A1-209ENST00000609606 ASXL1Q8IXJ9 1541 aa21.63■■□□□ 1.05
CSNK2A1-209ENST00000609606 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
CSNK2A1-209ENST00000609606 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
CSNK2A1-209ENST00000609606 PROSER2Q86WR7 435 aaPredicted RBP21.61■■□□□ 1.05
CSNK2A1-209ENST00000609606 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
CSNK2A1-209ENST00000609606 NCOA3Q9Y6Q9 1424 aa21.61■■□□□ 1.05
CSNK2A1-209ENST00000609606 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
CSNK2A1-209ENST00000609606 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
CSNK2A1-209ENST00000609606 LRPPRCP42704 1394 aaKnown RBP21.6■■□□□ 1.05
CSNK2A1-209ENST00000609606 TMEM94Q12767 1356 aa21.6■■□□□ 1.05
CSNK2A1-209ENST00000609606 ADGRB1O14514 1584 aa21.58■■□□□ 1.05
CSNK2A1-209ENST00000609606 TECPR2O15040 1411 aa21.58■■□□□ 1.05
CSNK2A1-209ENST00000609606 ABCC11Q96J66 1382 aa21.58■■□□□ 1.04
CSNK2A1-209ENST00000609606 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
CSNK2A1-209ENST00000609606 TMEM132EQ6IEE7 984 aa21.56■■□□□ 1.04
CSNK2A1-209ENST00000609606 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
CSNK2A1-209ENST00000609606 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
CSNK2A1-209ENST00000609606 TRPM1Q7Z4N2 1603 aa21.52■■□□□ 1.04
CSNK2A1-209ENST00000609606 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
CSNK2A1-209ENST00000609606 DLC1Q96QB1 1528 aa21.51■■□□□ 1.03
CSNK2A1-209ENST00000609606 RBM33Q96EV2 1170 aaKnown RBP21.51■■□□□ 1.03
CSNK2A1-209ENST00000609606 FAM135BQ49AJ0 1406 aa21.51■■□□□ 1.03
CSNK2A1-209ENST00000609606 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
CSNK2A1-209ENST00000609606 STK26Q9P289 416 aa21.5■■□□□ 1.03
CSNK2A1-209ENST00000609606 MSH6P52701 1360 aa21.49■■□□□ 1.03
CSNK2A1-209ENST00000609606 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
CSNK2A1-209ENST00000609606 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.48■■□□□ 1.03
CSNK2A1-209ENST00000609606 DCCP43146 1447 aa21.47■■□□□ 1.03
CSNK2A1-209ENST00000609606 ADGRL3Q9HAR2 1447 aa21.47■■□□□ 1.03
CSNK2A1-209ENST00000609606 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
CSNK2A1-209ENST00000609606 TOM1O60784 492 aa21.47■■□□□ 1.03
CSNK2A1-209ENST00000609606 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
CSNK2A1-209ENST00000609606 NBPF1Q3BBV0 1214 aa21.46■■□□□ 1.03
CSNK2A1-209ENST00000609606 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
CSNK2A1-209ENST00000609606 C14orf37Q86TY3 774 aa21.46■■□□□ 1.03
CSNK2A1-209ENST00000609606 ARHGEF28Q8N1W1 1705 aaKnown RBP21.44■■□□□ 1.02
CSNK2A1-209ENST00000609606 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms