RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ZFYVE9O95405 1425 aa24.49■■□□□ 1.51
SGMS1-209ENST00000609445 NUP155O75694 1391 aa24.48■■□□□ 1.51
SGMS1-209ENST00000609445 RIMS2Q9UQ26 1411 aa24.47■■□□□ 1.51
SGMS1-209ENST00000609445 KCNA6P17658 529 aa24.46■■□□□ 1.51
SGMS1-209ENST00000609445 BCANQ96GW7 911 aa24.46■■□□□ 1.51
SGMS1-209ENST00000609445 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-209ENST00000609445 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
SGMS1-209ENST00000609445 TMEM94Q12767 1356 aa24.44■■□□□ 1.5
SGMS1-209ENST00000609445 NWD1Q149M9 1564 aa24.42■■□□□ 1.5
SGMS1-209ENST00000609445 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
SGMS1-209ENST00000609445 RBM33Q96EV2 1170 aaKnown RBP24.42■■□□□ 1.5
SGMS1-209ENST00000609445 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
SGMS1-209ENST00000609445 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
SGMS1-209ENST00000609445 SOCS7O14512 581 aa24.4■■□□□ 1.5
SGMS1-209ENST00000609445 NUTM2DQ5VT03 806 aaPredicted RBP24.4■■□□□ 1.5
SGMS1-209ENST00000609445 RRBP1Q9P2E9 1410 aaKnown RBP24.4■■□□□ 1.5
SGMS1-209ENST00000609445 CHD2O14647 1828 aaKnown RBP24.39■■□□□ 1.49
SGMS1-209ENST00000609445 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
SGMS1-209ENST00000609445 HDGFP51858 240 aaKnown RBP24.37■■□□□ 1.49
SGMS1-209ENST00000609445 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
SGMS1-209ENST00000609445 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.34■■□□□ 1.49
SGMS1-209ENST00000609445 ADAMTS13Q76LX8 1427 aa24.32■■□□□ 1.48
SGMS1-209ENST00000609445 NAIPQ13075 1403 aa24.31■■□□□ 1.48
SGMS1-209ENST00000609445 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
SGMS1-209ENST00000609445 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
SGMS1-209ENST00000609445 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
SGMS1-209ENST00000609445 DIP2AQ14689 1571 aa24.27■■□□□ 1.48
SGMS1-209ENST00000609445 MSH6P52701 1360 aa24.27■■□□□ 1.48
SGMS1-209ENST00000609445 CLTCL1P53675 1640 aa24.24■■□□□ 1.47
SGMS1-209ENST00000609445 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
SGMS1-209ENST00000609445 NRXN3Q9Y4C0 1643 aa24.23■■□□□ 1.47
SGMS1-209ENST00000609445 TRPM2O94759 1503 aa24.22■■□□□ 1.47
SGMS1-209ENST00000609445 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
SGMS1-209ENST00000609445 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
SGMS1-209ENST00000609445 HFM1A2PYH4 1435 aa24.2■■□□□ 1.46
SGMS1-209ENST00000609445 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
SGMS1-209ENST00000609445 SLAIN2Q9P270 581 aa24.2■■□□□ 1.46
SGMS1-209ENST00000609445 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
SGMS1-209ENST00000609445 KIF1BO60333 1816 aa24.17■■□□□ 1.46
SGMS1-209ENST00000609445 SETBP1Q9Y6X0 1596 aa24.17■■□□□ 1.46
SGMS1-209ENST00000609445 C14orf37Q86TY3 774 aa24.17■■□□□ 1.46
SGMS1-209ENST00000609445 AMOTL2Q9Y2J4 779 aa24.17■■□□□ 1.46
SGMS1-209ENST00000609445 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
SGMS1-209ENST00000609445 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
SGMS1-209ENST00000609445 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
SGMS1-209ENST00000609445 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
SGMS1-209ENST00000609445 XRN1Q8IZH2 1706 aaKnown RBP24.14■■□□□ 1.45
SGMS1-209ENST00000609445 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
SGMS1-209ENST00000609445 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
SGMS1-209ENST00000609445 RGS17Q9UGC6 210 aaPredicted RBP24.1■■□□□ 1.45
SGMS1-209ENST00000609445 METP08581 1390 aa24.1■■□□□ 1.45
SGMS1-209ENST00000609445 ATF3P18847 181 aa24.08■■□□□ 1.45
SGMS1-209ENST00000609445 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.45
SGMS1-209ENST00000609445 COL16A1Q07092 1604 aaPredicted RBP24.07■■□□□ 1.44
SGMS1-209ENST00000609445 FOXD1Q16676 465 aa24.05■■□□□ 1.44
SGMS1-209ENST00000609445 JCADQ9P266 1359 aa24.03■■□□□ 1.44
SGMS1-209ENST00000609445 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
SGMS1-209ENST00000609445 AHDC1Q5TGY3 1603 aaPredicted RBP24.01■■□□□ 1.43
SGMS1-209ENST00000609445 PPLO60437 1756 aa24.01■■□□□ 1.43
SGMS1-209ENST00000609445 DCCP43146 1447 aa24■■□□□ 1.43
SGMS1-209ENST00000609445 BRINP3Q76B58 766 aa23.99■■□□□ 1.43
SGMS1-209ENST00000609445 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
SGMS1-209ENST00000609445 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
SGMS1-209ENST00000609445 MST1RQ04912 1400 aa23.97■■□□□ 1.43
SGMS1-209ENST00000609445 POTEAQ6S8J7 498 aa23.97■■□□□ 1.43
SGMS1-209ENST00000609445 ADGRL3Q9HAR2 1447 aa23.96■■□□□ 1.43
SGMS1-209ENST00000609445 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
SGMS1-209ENST00000609445 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
SGMS1-209ENST00000609445 LRP6O75581 1613 aa23.94■■□□□ 1.42
SGMS1-209ENST00000609445 SHPRHQ149N8 1683 aa23.93■■□□□ 1.42
SGMS1-209ENST00000609445 MPHOSPH9Q99550 1183 aa23.93■■□□□ 1.42
SGMS1-209ENST00000609445 CCDC144AA2RUR9 1427 aa23.92■■□□□ 1.42
SGMS1-209ENST00000609445 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
SGMS1-209ENST00000609445 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
SGMS1-209ENST00000609445 NHSL1Q5SYE7 1610 aa23.9■■□□□ 1.42
SGMS1-209ENST00000609445 SPATA31A6Q5VVP1 1343 aa23.88■■□□□ 1.41
SGMS1-209ENST00000609445 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
SGMS1-209ENST00000609445 RGL3Q3MIN7 710 aa23.88■■□□□ 1.41
SGMS1-209ENST00000609445 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
SGMS1-209ENST00000609445 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
SGMS1-209ENST00000609445 DDX17Q92841 729 aaKnown RBP23.87■■□□□ 1.41
SGMS1-209ENST00000609445 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
SGMS1-209ENST00000609445 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
SGMS1-209ENST00000609445 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
SGMS1-209ENST00000609445 C1orf167Q5SNV9 1468 aa23.84■■□□□ 1.41
SGMS1-209ENST00000609445 NUTM2BA6NNL0 878 aaPredicted RBP23.82■■□□□ 1.4
SGMS1-209ENST00000609445 NUTM2EB1AL46 878 aaPredicted RBP23.82■■□□□ 1.4
SGMS1-209ENST00000609445 NUTM2AQ8IVF1 878 aaPredicted RBP23.82■■□□□ 1.4
SGMS1-209ENST00000609445 ANKRD30BQ9BXX2 1392 aa23.79■■□□□ 1.4
SGMS1-209ENST00000609445 ORAI2Q96SN7 254 aa23.78■■□□□ 1.4
SGMS1-209ENST00000609445 LRRC59Q96AG4 307 aaKnown RBP23.77■■□□□ 1.4
SGMS1-209ENST00000609445 STK26Q9P289 416 aa23.77■■□□□ 1.4
SGMS1-209ENST00000609445 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
SGMS1-209ENST00000609445 LAMC1P11047 1609 aa23.75■■□□□ 1.39
SGMS1-209ENST00000609445 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
SGMS1-209ENST00000609445 PNPLA6Q8IY17 1366 aa23.75■■□□□ 1.39
SGMS1-209ENST00000609445 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
SGMS1-209ENST00000609445 WAPLQ7Z5K2 1190 aa23.74■■□□□ 1.39
SGMS1-209ENST00000609445 CDC42BPGQ6DT37 1551 aa23.74■■□□□ 1.39
SGMS1-209ENST00000609445 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms