RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 KANK1Q14678 1352 aa22.5■■□□□ 1.19
LINC01278-203ENST00000608788 DAPK1P53355 1430 aa22.49■■□□□ 1.19
LINC01278-203ENST00000608788 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
LINC01278-203ENST00000608788 JCADQ9P266 1359 aa22.49■■□□□ 1.19
LINC01278-203ENST00000608788 PHLPP1O60346 1717 aa22.48■■□□□ 1.19
LINC01278-203ENST00000608788 SLAIN2Q9P270 581 aa22.48■■□□□ 1.19
LINC01278-203ENST00000608788 MSH6P52701 1360 aa22.48■■□□□ 1.19
LINC01278-203ENST00000608788 COL16A1Q07092 1604 aaPredicted RBP22.47■■□□□ 1.19
LINC01278-203ENST00000608788 ZFYVE9O95405 1425 aa22.46■■□□□ 1.19
LINC01278-203ENST00000608788 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
LINC01278-203ENST00000608788 CHD2O14647 1828 aaKnown RBP22.44■■□□□ 1.18
LINC01278-203ENST00000608788 HOXD11P31277 338 aaPredicted RBP22.44■■□□□ 1.18
LINC01278-203ENST00000608788 LRP6O75581 1613 aa22.43■■□□□ 1.18
LINC01278-203ENST00000608788 SLC52A1Q9NWF4 448 aa22.43■■□□□ 1.18
LINC01278-203ENST00000608788 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
LINC01278-203ENST00000608788 ANKRD30AQ9BXX3 1397 aa22.4■■□□□ 1.18
LINC01278-203ENST00000608788 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
LINC01278-203ENST00000608788 FGD6Q6ZV73 1430 aa22.4■■□□□ 1.18
LINC01278-203ENST00000608788 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
LINC01278-203ENST00000608788 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.17
LINC01278-203ENST00000608788 SPATA31A6Q5VVP1 1343 aa22.37■■□□□ 1.17
LINC01278-203ENST00000608788 AHDC1Q5TGY3 1603 aaPredicted RBP22.37■■□□□ 1.17
LINC01278-203ENST00000608788 MYO5BQ9ULV0 1848 aa22.36■■□□□ 1.17
LINC01278-203ENST00000608788 ADGRL2O95490 1459 aa22.36■■□□□ 1.17
LINC01278-203ENST00000608788 UPF1Q92900 1129 aaKnown RBP eCLIP22.36■■□□□ 1.17
LINC01278-203ENST00000608788 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
LINC01278-203ENST00000608788 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
LINC01278-203ENST00000608788 RIMS2Q9UQ26 1411 aa22.35■■□□□ 1.17
LINC01278-203ENST00000608788 SHPRHQ149N8 1683 aa22.34■■□□□ 1.17
LINC01278-203ENST00000608788 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
LINC01278-203ENST00000608788 TBX22Q9Y458 520 aa22.34■■□□□ 1.17
LINC01278-203ENST00000608788 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
LINC01278-203ENST00000608788 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.16
LINC01278-203ENST00000608788 ADAMTS13Q76LX8 1427 aa22.32■■□□□ 1.16
LINC01278-203ENST00000608788 BCANQ96GW7 911 aa22.32■■□□□ 1.16
LINC01278-203ENST00000608788 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
LINC01278-203ENST00000608788 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
LINC01278-203ENST00000608788 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
LINC01278-203ENST00000608788 PIK3R4Q99570 1358 aa22.27■■□□□ 1.16
LINC01278-203ENST00000608788 CADPS2Q86UW7 1296 aa22.27■■□□□ 1.16
LINC01278-203ENST00000608788 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
LINC01278-203ENST00000608788 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
LINC01278-203ENST00000608788 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
LINC01278-203ENST00000608788 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
LINC01278-203ENST00000608788 CDK12Q9NYV4 1490 aaPredicted RBP22.26■■□□□ 1.15
LINC01278-203ENST00000608788 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
LINC01278-203ENST00000608788 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
LINC01278-203ENST00000608788 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.23■■□□□ 1.15
LINC01278-203ENST00000608788 BRINP3Q76B58 766 aa22.22■■□□□ 1.15
LINC01278-203ENST00000608788 RXRBP28702 533 aa22.21■■□□□ 1.15
LINC01278-203ENST00000608788 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
LINC01278-203ENST00000608788 UNC13BO14795 1591 aa22.21■■□□□ 1.15
LINC01278-203ENST00000608788 ATF3P18847 181 aa22.2■■□□□ 1.14
LINC01278-203ENST00000608788 C14orf37Q86TY3 774 aa22.2■■□□□ 1.14
LINC01278-203ENST00000608788 DCCP43146 1447 aa22.2■■□□□ 1.14
LINC01278-203ENST00000608788 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
LINC01278-203ENST00000608788 E9PCH4 1651 aa22.19■■□□□ 1.14
LINC01278-203ENST00000608788 TRPM2O94759 1503 aa22.18■■□□□ 1.14
LINC01278-203ENST00000608788 ASXL1Q8IXJ9 1541 aa22.17■■□□□ 1.14
LINC01278-203ENST00000608788 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
LINC01278-203ENST00000608788 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
LINC01278-203ENST00000608788 NHSL1Q5SYE7 1610 aa22.16■■□□□ 1.14
LINC01278-203ENST00000608788 XRN1Q8IZH2 1706 aaKnown RBP22.15■■□□□ 1.14
LINC01278-203ENST00000608788 APLP2Q06481 763 aa22.15■■□□□ 1.14
LINC01278-203ENST00000608788 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
LINC01278-203ENST00000608788 AFF2P51816 1311 aa22.14■■□□□ 1.14
LINC01278-203ENST00000608788 MST1RQ04912 1400 aa22.14■■□□□ 1.13
LINC01278-203ENST00000608788 NRXN3Q9Y4C0 1643 aa22.13■■□□□ 1.13
LINC01278-203ENST00000608788 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
LINC01278-203ENST00000608788 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
LINC01278-203ENST00000608788 CHGAP10645 457 aaKnown RBP22.12■■□□□ 1.13
LINC01278-203ENST00000608788 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
LINC01278-203ENST00000608788 IQGAP3Q86VI3 1631 aa22.12■■□□□ 1.13
LINC01278-203ENST00000608788 RGS12O14924 1447 aa22.12■■□□□ 1.13
LINC01278-203ENST00000608788 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
LINC01278-203ENST00000608788 EP400Q96L91 3159 aa22.09■■□□□ 1.13
LINC01278-203ENST00000608788 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.13
LINC01278-203ENST00000608788 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
LINC01278-203ENST00000608788 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
LINC01278-203ENST00000608788 METP08581 1390 aa22.04■■□□□ 1.12
LINC01278-203ENST00000608788 ROCK1Q13464 1354 aa22.04■■□□□ 1.12
LINC01278-203ENST00000608788 NPM3O75607 178 aaKnown RBP22.04■■□□□ 1.12
LINC01278-203ENST00000608788 RBM6P78332 1123 aaKnown RBP22.04■■□□□ 1.12
LINC01278-203ENST00000608788 QTRT2Q9H974 415 aaKnown RBP22.03■■□□□ 1.12
LINC01278-203ENST00000608788 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
LINC01278-203ENST00000608788 LAMC1P11047 1609 aa22.02■■□□□ 1.11
LINC01278-203ENST00000608788 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
LINC01278-203ENST00000608788 C8orf37Q96NL8 207 aa22.01■■□□□ 1.11
LINC01278-203ENST00000608788 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
LINC01278-203ENST00000608788 NUP155O75694 1391 aa21.98■■□□□ 1.11
LINC01278-203ENST00000608788 C1orf167Q5SNV9 1468 aa21.96■■□□□ 1.11
LINC01278-203ENST00000608788 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
LINC01278-203ENST00000608788 NEXMIFQ5QGS0 1516 aa21.93■■□□□ 1.1
LINC01278-203ENST00000608788 ATAD2Q6PL18 1390 aa21.92■■□□□ 1.1
LINC01278-203ENST00000608788 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
LINC01278-203ENST00000608788 KCNA4P22459 653 aa21.92■■□□□ 1.1
LINC01278-203ENST00000608788 NGLY1Q96IV0 654 aa21.92■■□□□ 1.1
LINC01278-203ENST00000608788 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
LINC01278-203ENST00000608788 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
LINC01278-203ENST00000608788 PTCH1Q13635 1447 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms