RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
LINC00343-211ENST00000608426 TRIM66O15016 1216 aa13.5□□□□□ -0.25
LINC00343-211ENST00000608426 BCAMP50895 628 aa13.5□□□□□ -0.25
LINC00343-211ENST00000608426 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
LINC00343-211ENST00000608426 SOWAHBA6NEL2 793 aa13.47□□□□□ -0.25
LINC00343-211ENST00000608426 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
LINC00343-211ENST00000608426 THSD4Q6ZMP0 1018 aa13.47□□□□□ -0.25
LINC00343-211ENST00000608426 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.25
LINC00343-211ENST00000608426 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
LINC00343-211ENST00000608426 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-211ENST00000608426 PTPN5P54829 565 aa13.44□□□□□ -0.26
LINC00343-211ENST00000608426 AMHR2Q16671 573 aa13.44□□□□□ -0.26
LINC00343-211ENST00000608426 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
LINC00343-211ENST00000608426 CLCN1P35523 988 aa13.43□□□□□ -0.26
LINC00343-211ENST00000608426 GPCPD1Q9NPB8 672 aa13.43□□□□□ -0.26
LINC00343-211ENST00000608426 PDE4DQ08499 809 aa13.42□□□□□ -0.26
LINC00343-211ENST00000608426 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
LINC00343-211ENST00000608426 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
LINC00343-211ENST00000608426 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
LINC00343-211ENST00000608426 PPP4CP60510 307 aa13.39□□□□□ -0.27
LINC00343-211ENST00000608426 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
LINC00343-211ENST00000608426 SULF1Q8IWU6 871 aa13.38□□□□□ -0.27
LINC00343-211ENST00000608426 RDH13Q8NBN7 331 aa13.38□□□□□ -0.27
LINC00343-211ENST00000608426 WBP1LQ9NX94 342 aa13.38□□□□□ -0.27
LINC00343-211ENST00000608426 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
LINC00343-211ENST00000608426 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
LINC00343-211ENST00000608426 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
LINC00343-211ENST00000608426 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
LINC00343-211ENST00000608426 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
LINC00343-211ENST00000608426 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
LINC00343-211ENST00000608426 SLC10A3P09131 477 aa13.34□□□□□ -0.27
LINC00343-211ENST00000608426 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
LINC00343-211ENST00000608426 SSTR3P32745 418 aaPredicted RBP13.32□□□□□ -0.28
LINC00343-211ENST00000608426 CFHP08603 1231 aa13.31□□□□□ -0.28
LINC00343-211ENST00000608426 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
LINC00343-211ENST00000608426 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-211ENST00000608426 CD46P15529 392 aa13.29□□□□□ -0.28
LINC00343-211ENST00000608426 KMT5BQ4FZB7 885 aa13.29□□□□□ -0.28
LINC00343-211ENST00000608426 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
LINC00343-211ENST00000608426 APLP1P51693 650 aa13.27□□□□□ -0.29
LINC00343-211ENST00000608426 MS4A1P11836 297 aa13.26□□□□□ -0.29
LINC00343-211ENST00000608426 PRR14Q9BWN1 585 aa13.26□□□□□ -0.29
LINC00343-211ENST00000608426 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
LINC00343-211ENST00000608426 GCGRP47871 477 aa13.24□□□□□ -0.29
LINC00343-211ENST00000608426 BRPF1P55201 1214 aaPredicted RBP13.24□□□□□ -0.29
LINC00343-211ENST00000608426 BEGAINQ9BUH8 593 aa13.23□□□□□ -0.29
LINC00343-211ENST00000608426 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
LINC00343-211ENST00000608426 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
LINC00343-211ENST00000608426 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
LINC00343-211ENST00000608426 KDM4AO75164 1064 aa13.18□□□□□ -0.3
LINC00343-211ENST00000608426 FUT2Q10981 343 aa13.18□□□□□ -0.3
LINC00343-211ENST00000608426 COPS2P61201 443 aa13.15□□□□□ -0.3
LINC00343-211ENST00000608426 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
LINC00343-211ENST00000608426 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
LINC00343-211ENST00000608426 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
LINC00343-211ENST00000608426 MTRQ99707 1265 aa13.14□□□□□ -0.31
LINC00343-211ENST00000608426 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
LINC00343-211ENST00000608426 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
LINC00343-211ENST00000608426 SPIRE2Q8WWL2 714 aa13.13□□□□□ -0.31
LINC00343-211ENST00000608426 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
LINC00343-211ENST00000608426 USP46P62068 366 aa13.12□□□□□ -0.31
LINC00343-211ENST00000608426 TBC1D2Q9BYX2 928 aa13.11□□□□□ -0.31
LINC00343-211ENST00000608426 HOXA2O43364 376 aa13.1□□□□□ -0.31
LINC00343-211ENST00000608426 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
LINC00343-211ENST00000608426 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
LINC00343-211ENST00000608426 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
LINC00343-211ENST00000608426 NR1I2O75469 434 aa13.08□□□□□ -0.32
LINC00343-211ENST00000608426 MORN1Q5T089 497 aa13.08□□□□□ -0.32
LINC00343-211ENST00000608426 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
LINC00343-211ENST00000608426 HLA-CQ95604 372 aa13.08□□□□□ -0.32
LINC00343-211ENST00000608426 KCNC4Q03721 635 aa13.07□□□□□ -0.32
LINC00343-211ENST00000608426 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
LINC00343-211ENST00000608426 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
LINC00343-211ENST00000608426 MOXD2PA6NHM9 499 aa13.06□□□□□ -0.32
LINC00343-211ENST00000608426 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
LINC00343-211ENST00000608426 GUCA2AQ02747 115 aa13.06□□□□□ -0.32
LINC00343-211ENST00000608426 NDUFV2P19404 249 aa13.05□□□□□ -0.32
LINC00343-211ENST00000608426 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
LINC00343-211ENST00000608426 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
LINC00343-211ENST00000608426 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
LINC00343-211ENST00000608426 ZPR1O75312 459 aa13.04□□□□□ -0.32
LINC00343-211ENST00000608426 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
LINC00343-211ENST00000608426 FDX1P10109 184 aa13.03□□□□□ -0.32
LINC00343-211ENST00000608426 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
LINC00343-211ENST00000608426 TLL1O43897 1013 aa13.01□□□□□ -0.33
LINC00343-211ENST00000608426 RSBN1LQ6PCB5 846 aaPredicted RBP13□□□□□ -0.33
LINC00343-211ENST00000608426 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
LINC00343-211ENST00000608426 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
LINC00343-211ENST00000608426 Q3C1V9 767 aa12.99□□□□□ -0.33
LINC00343-211ENST00000608426 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-211ENST00000608426 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
LINC00343-211ENST00000608426 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
LINC00343-211ENST00000608426 PCDHGC3Q9UN70 934 aa12.98□□□□□ -0.33
LINC00343-211ENST00000608426 SPTLC1O15269 473 aa12.97□□□□□ -0.33
LINC00343-211ENST00000608426 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
LINC00343-211ENST00000608426 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
LINC00343-211ENST00000608426 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
LINC00343-211ENST00000608426 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
LINC00343-211ENST00000608426 SPSB2Q99619 263 aa12.97□□□□□ -0.33
LINC00343-211ENST00000608426 LIMD1Q9UGP4 676 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms