RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
CTCFL-214ENST00000608108 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
CTCFL-214ENST00000608108 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
CTCFL-214ENST00000608108 KDM4FA0A1W2PPD8 638 aa15.97■□□□□ 0.15
CTCFL-214ENST00000608108 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
CTCFL-214ENST00000608108 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
CTCFL-214ENST00000608108 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
CTCFL-214ENST00000608108 ZNF142P52746 1687 aaPredicted RBP15.96■□□□□ 0.15
CTCFL-214ENST00000608108 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.14
CTCFL-214ENST00000608108 MYOM2P54296 1465 aa15.95■□□□□ 0.14
CTCFL-214ENST00000608108 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
CTCFL-214ENST00000608108 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
CTCFL-214ENST00000608108 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
CTCFL-214ENST00000608108 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
CTCFL-214ENST00000608108 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
CTCFL-214ENST00000608108 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
CTCFL-214ENST00000608108 RIMS2Q9UQ26 1411 aa15.89■□□□□ 0.13
CTCFL-214ENST00000608108 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
CTCFL-214ENST00000608108 ZFYVE9O95405 1425 aa15.89■□□□□ 0.13
CTCFL-214ENST00000608108 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
CTCFL-214ENST00000608108 RALGAPBQ86X10 1494 aa15.88■□□□□ 0.13
CTCFL-214ENST00000608108 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
CTCFL-214ENST00000608108 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
CTCFL-214ENST00000608108 SLIT1O75093 1534 aa15.87■□□□□ 0.13
CTCFL-214ENST00000608108 PIK3C2GO75747 1445 aa15.87■□□□□ 0.13
CTCFL-214ENST00000608108 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
CTCFL-214ENST00000608108 KIAA1210Q9ULL0 1709 aa15.86■□□□□ 0.13
CTCFL-214ENST00000608108 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
CTCFL-214ENST00000608108 ARHGAP23Q9P227 1491 aa15.85■□□□□ 0.13
CTCFL-214ENST00000608108 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
CTCFL-214ENST00000608108 LAMC1P11047 1609 aa15.83■□□□□ 0.13
CTCFL-214ENST00000608108 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.13
CTCFL-214ENST00000608108 ROCK2O75116 1388 aaKnown RBP15.82■□□□□ 0.12
CTCFL-214ENST00000608108 IQGAP1P46940 1657 aa15.81■□□□□ 0.12
CTCFL-214ENST00000608108 NRXN3Q9Y4C0 1643 aa15.8■□□□□ 0.12
CTCFL-214ENST00000608108 SCAF11Q99590 1463 aaKnown RBP15.8■□□□□ 0.12
CTCFL-214ENST00000608108 EID1Q9Y6B2 187 aa15.8■□□□□ 0.12
CTCFL-214ENST00000608108 LTKP29376 864 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 POLR1AO95602 1720 aaPredicted RBP15.79■□□□□ 0.12
CTCFL-214ENST00000608108 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 GPRASP1Q5JY77 1395 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 NBPF1Q3BBV0 1214 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 CFAP70Q5T0N1 1121 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
CTCFL-214ENST00000608108 SETD1AO15047 1707 aaKnown RBP15.78■□□□□ 0.12
CTCFL-214ENST00000608108 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
CTCFL-214ENST00000608108 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
CTCFL-214ENST00000608108 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
CTCFL-214ENST00000608108 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.12
CTCFL-214ENST00000608108 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
CTCFL-214ENST00000608108 ADGRB1O14514 1584 aa15.76■□□□□ 0.11
CTCFL-214ENST00000608108 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
CTCFL-214ENST00000608108 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
CTCFL-214ENST00000608108 BCANQ96GW7 911 aa15.75■□□□□ 0.11
CTCFL-214ENST00000608108 USP47Q96K76 1375 aa15.74■□□□□ 0.11
CTCFL-214ENST00000608108 ADAMTS13Q76LX8 1427 aa15.73■□□□□ 0.11
CTCFL-214ENST00000608108 EIF4G2P78344 907 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTCFL-214ENST00000608108 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
CTCFL-214ENST00000608108 HSPA2P54652 639 aa15.71■□□□□ 0.11
CTCFL-214ENST00000608108 TMEM132EQ6IEE7 984 aa15.71■□□□□ 0.11
CTCFL-214ENST00000608108 MED14O60244 1454 aa15.7■□□□□ 0.1
CTCFL-214ENST00000608108 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
CTCFL-214ENST00000608108 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-214ENST00000608108 ARHGEF28Q8N1W1 1705 aaKnown RBP15.69■□□□□ 0.1
CTCFL-214ENST00000608108 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
CTCFL-214ENST00000608108 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
CTCFL-214ENST00000608108 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
CTCFL-214ENST00000608108 METP08581 1390 aa15.68■□□□□ 0.1
CTCFL-214ENST00000608108 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
CTCFL-214ENST00000608108 YTHDC2Q9H6S0 1430 aaKnown RBP15.68■□□□□ 0.1
CTCFL-214ENST00000608108 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
CTCFL-214ENST00000608108 STRCQ7RTU9 1775 aa15.66■□□□□ 0.1
CTCFL-214ENST00000608108 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
CTCFL-214ENST00000608108 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
CTCFL-214ENST00000608108 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
CTCFL-214ENST00000608108 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
CTCFL-214ENST00000608108 LRPPRCP42704 1394 aaKnown RBP15.64■□□□□ 0.09
CTCFL-214ENST00000608108 STK26Q9P289 416 aa15.64■□□□□ 0.09
CTCFL-214ENST00000608108 QRICH2Q9H0J4 1663 aa15.64■□□□□ 0.09
CTCFL-214ENST00000608108 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
CTCFL-214ENST00000608108 TECPR2O15040 1411 aa15.62■□□□□ 0.09
CTCFL-214ENST00000608108 CPS1P31327 1500 aa15.62■□□□□ 0.09
CTCFL-214ENST00000608108 XRN1Q8IZH2 1706 aaKnown RBP15.62■□□□□ 0.09
CTCFL-214ENST00000608108 CHD2O14647 1828 aaKnown RBP15.62■□□□□ 0.09
CTCFL-214ENST00000608108 ABCC11Q96J66 1382 aa15.61■□□□□ 0.09
CTCFL-214ENST00000608108 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
CTCFL-214ENST00000608108 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
CTCFL-214ENST00000608108 CENPJQ9HC77 1338 aaPredicted RBP15.61■□□□□ 0.09
CTCFL-214ENST00000608108 TESK2Q96S53 571 aa15.58■□□□□ 0.09
CTCFL-214ENST00000608108 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 AMOTL2Q9Y2J4 779 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 FAM135BQ49AJ0 1406 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 POGKQ9P215 609 aa15.57■□□□□ 0.08
CTCFL-214ENST00000608108 ROBO2Q9HCK4 1378 aa15.56■□□□□ 0.08
CTCFL-214ENST00000608108 NWD1Q149M9 1564 aa15.56■□□□□ 0.08
CTCFL-214ENST00000608108 SAFB2Q14151 953 aaKnown RBP eCLIP15.55■□□□□ 0.08
CTCFL-214ENST00000608108 PLEKHH1Q9ULM0 1364 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms