RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 NOS1P29475 1434 aa16.4■□□□□ 0.22
RFTN1-212ENST00000607320 IDI1Q13907 227 aa16.4■□□□□ 0.22
RFTN1-212ENST00000607320 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
RFTN1-212ENST00000607320 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
RFTN1-212ENST00000607320 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
RFTN1-212ENST00000607320 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
RFTN1-212ENST00000607320 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
RFTN1-212ENST00000607320 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
RFTN1-212ENST00000607320 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
RFTN1-212ENST00000607320 UNC13BO14795 1591 aa16.38■□□□□ 0.21
RFTN1-212ENST00000607320 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
RFTN1-212ENST00000607320 MYO5BQ9ULV0 1848 aa16.34■□□□□ 0.21
RFTN1-212ENST00000607320 HSPA1LP34931 641 aa16.32■□□□□ 0.2
RFTN1-212ENST00000607320 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
RFTN1-212ENST00000607320 ALKQ9UM73 1620 aa16.32■□□□□ 0.2
RFTN1-212ENST00000607320 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
RFTN1-212ENST00000607320 E9PCH4 1651 aa16.31■□□□□ 0.2
RFTN1-212ENST00000607320 ITGAEP38570 1179 aa16.3■□□□□ 0.2
RFTN1-212ENST00000607320 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
RFTN1-212ENST00000607320 ILDR2Q71H61 639 aa16.29■□□□□ 0.2
RFTN1-212ENST00000607320 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
RFTN1-212ENST00000607320 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
RFTN1-212ENST00000607320 NUP155O75694 1391 aa16.27■□□□□ 0.2
RFTN1-212ENST00000607320 KCNA6P17658 529 aa16.27■□□□□ 0.2
RFTN1-212ENST00000607320 BCANQ96GW7 911 aa16.27■□□□□ 0.2
RFTN1-212ENST00000607320 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.2
RFTN1-212ENST00000607320 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
RFTN1-212ENST00000607320 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
RFTN1-212ENST00000607320 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
RFTN1-212ENST00000607320 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
RFTN1-212ENST00000607320 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
RFTN1-212ENST00000607320 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
RFTN1-212ENST00000607320 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
RFTN1-212ENST00000607320 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.24■□□□□ 0.19
RFTN1-212ENST00000607320 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
RFTN1-212ENST00000607320 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
RFTN1-212ENST00000607320 SOCS7O14512 581 aa16.23■□□□□ 0.19
RFTN1-212ENST00000607320 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
RFTN1-212ENST00000607320 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
RFTN1-212ENST00000607320 FKBP8Q14318 412 aa16.22■□□□□ 0.19
RFTN1-212ENST00000607320 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
RFTN1-212ENST00000607320 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
RFTN1-212ENST00000607320 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
RFTN1-212ENST00000607320 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
RFTN1-212ENST00000607320 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
RFTN1-212ENST00000607320 MSH6P52701 1360 aa16.17■□□□□ 0.18
RFTN1-212ENST00000607320 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
RFTN1-212ENST00000607320 PIK3R4Q99570 1358 aa16.14■□□□□ 0.17
RFTN1-212ENST00000607320 NAIPQ13075 1403 aa16.14■□□□□ 0.17
RFTN1-212ENST00000607320 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
RFTN1-212ENST00000607320 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
RFTN1-212ENST00000607320 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
RFTN1-212ENST00000607320 NCOA3Q9Y6Q9 1424 aa16.13■□□□□ 0.17
RFTN1-212ENST00000607320 KIF1BO60333 1816 aa16.13■□□□□ 0.17
RFTN1-212ENST00000607320 TRPM2O94759 1503 aa16.13■□□□□ 0.17
RFTN1-212ENST00000607320 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
RFTN1-212ENST00000607320 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
RFTN1-212ENST00000607320 CLTCL1P53675 1640 aa16.09■□□□□ 0.17
RFTN1-212ENST00000607320 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
RFTN1-212ENST00000607320 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
RFTN1-212ENST00000607320 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
RFTN1-212ENST00000607320 PHLPP1O60346 1717 aa16.08■□□□□ 0.16
RFTN1-212ENST00000607320 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
RFTN1-212ENST00000607320 NRXN3Q9Y4C0 1643 aa16.07■□□□□ 0.16
RFTN1-212ENST00000607320 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.07■□□□□ 0.16
RFTN1-212ENST00000607320 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
RFTN1-212ENST00000607320 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
RFTN1-212ENST00000607320 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
RFTN1-212ENST00000607320 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
RFTN1-212ENST00000607320 ATF3P18847 181 aa16.04■□□□□ 0.16
RFTN1-212ENST00000607320 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
RFTN1-212ENST00000607320 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
RFTN1-212ENST00000607320 DCCP43146 1447 aa16.01■□□□□ 0.15
RFTN1-212ENST00000607320 JCADQ9P266 1359 aa16■□□□□ 0.15
RFTN1-212ENST00000607320 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
RFTN1-212ENST00000607320 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
RFTN1-212ENST00000607320 METP08581 1390 aa15.99■□□□□ 0.15
RFTN1-212ENST00000607320 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
RFTN1-212ENST00000607320 PPLO60437 1756 aa15.98■□□□□ 0.15
RFTN1-212ENST00000607320 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
RFTN1-212ENST00000607320 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
RFTN1-212ENST00000607320 SETD1AO15047 1707 aaKnown RBP15.95■□□□□ 0.14
RFTN1-212ENST00000607320 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
RFTN1-212ENST00000607320 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
RFTN1-212ENST00000607320 SHPRHQ149N8 1683 aa15.93■□□□□ 0.14
RFTN1-212ENST00000607320 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
RFTN1-212ENST00000607320 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
RFTN1-212ENST00000607320 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
RFTN1-212ENST00000607320 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
RFTN1-212ENST00000607320 MST1RQ04912 1400 aa15.92■□□□□ 0.14
RFTN1-212ENST00000607320 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
RFTN1-212ENST00000607320 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
RFTN1-212ENST00000607320 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
RFTN1-212ENST00000607320 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
RFTN1-212ENST00000607320 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
RFTN1-212ENST00000607320 MEX3CQ5U5Q3 659 aaKnown RBP15.88■□□□□ 0.13
RFTN1-212ENST00000607320 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
RFTN1-212ENST00000607320 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
RFTN1-212ENST00000607320 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
RFTN1-212ENST00000607320 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms