RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 RBM33Q96EV2 1170 aaKnown RBP27.94■■■□□ 2.06
CCDC12-213ENST00000605875 MYO5BQ9ULV0 1848 aa27.92■■■□□ 2.06
CCDC12-213ENST00000605875 NWD1Q149M9 1564 aa27.9■■■□□ 2.06
CCDC12-213ENST00000605875 GCC2Q8IWJ2 1684 aa27.89■■■□□ 2.06
CCDC12-213ENST00000605875 HDGFP51858 240 aaKnown RBP27.89■■■□□ 2.06
CCDC12-213ENST00000605875 ZFYVE9O95405 1425 aa27.89■■■□□ 2.06
CCDC12-213ENST00000605875 NKTRP30414 1462 aaKnown RBP27.89■■■□□ 2.05
CCDC12-213ENST00000605875 PLEKHG1Q9ULL1 1385 aa27.87■■■□□ 2.05
CCDC12-213ENST00000605875 UNC13BO14795 1591 aa27.87■■■□□ 2.05
CCDC12-213ENST00000605875 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
CCDC12-213ENST00000605875 PPP1R15AO75807 674 aaPredicted RBP27.87■■■□□ 2.05
CCDC12-213ENST00000605875 ROBO1Q9Y6N7 1651 aa27.86■■■□□ 2.05
CCDC12-213ENST00000605875 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
CCDC12-213ENST00000605875 CHGAP10645 457 aaKnown RBP27.84■■■□□ 2.05
CCDC12-213ENST00000605875 RGS17Q9UGC6 210 aaPredicted RBP27.83■■■□□ 2.05
CCDC12-213ENST00000605875 MSH6P52701 1360 aa27.83■■■□□ 2.05
CCDC12-213ENST00000605875 CHD2O14647 1828 aaKnown RBP27.83■■■□□ 2.05
CCDC12-213ENST00000605875 ROCK1Q13464 1354 aa27.82■■■□□ 2.04
CCDC12-213ENST00000605875 E9PCH4 1651 aa27.81■■■□□ 2.04
CCDC12-213ENST00000605875 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.8■■■□□ 2.04
CCDC12-213ENST00000605875 TBX22Q9Y458 520 aa27.79■■■□□ 2.04
CCDC12-213ENST00000605875 SLAIN2Q9P270 581 aa27.78■■■□□ 2.04
CCDC12-213ENST00000605875 NUTM2DQ5VT03 806 aaPredicted RBP27.77■■■□□ 2.04
CCDC12-213ENST00000605875 IQGAP3Q86VI3 1631 aa27.77■■■□□ 2.04
CCDC12-213ENST00000605875 ITGAEP38570 1179 aa27.75■■■□□ 2.03
CCDC12-213ENST00000605875 NUP155O75694 1391 aa27.73■■■□□ 2.03
CCDC12-213ENST00000605875 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
CCDC12-213ENST00000605875 PHLPP1O60346 1717 aa27.71■■■□□ 2.03
CCDC12-213ENST00000605875 ADAMTS13Q76LX8 1427 aa27.71■■■□□ 2.03
CCDC12-213ENST00000605875 NCOA3Q9Y6Q9 1424 aa27.7■■■□□ 2.03
CCDC12-213ENST00000605875 C14orf37Q86TY3 774 aa27.69■■■□□ 2.02
CCDC12-213ENST00000605875 DIP2AQ14689 1571 aa27.69■■■□□ 2.02
CCDC12-213ENST00000605875 POTEAQ6S8J7 498 aa27.67■■■□□ 2.02
CCDC12-213ENST00000605875 PIK3R4Q99570 1358 aa27.66■■■□□ 2.02
CCDC12-213ENST00000605875 JCADQ9P266 1359 aa27.64■■■□□ 2.02
CCDC12-213ENST00000605875 C19orf44Q9H6X5 657 aa27.62■■■□□ 2.01
CCDC12-213ENST00000605875 TRPM2O94759 1503 aa27.62■■■□□ 2.01
CCDC12-213ENST00000605875 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.61■■■□□ 2.01
CCDC12-213ENST00000605875 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
CCDC12-213ENST00000605875 ATF3P18847 181 aa27.6■■■□□ 2.01
CCDC12-213ENST00000605875 CADPS2Q86UW7 1296 aa27.6■■■□□ 2.01
CCDC12-213ENST00000605875 COL16A1Q07092 1604 aaPredicted RBP27.59■■■□□ 2.01
CCDC12-213ENST00000605875 SPHKAPQ2M3C7 1700 aa27.58■■■□□ 2.01
CCDC12-213ENST00000605875 PTPRUQ92729 1446 aa27.58■■■□□ 2
CCDC12-213ENST00000605875 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
CCDC12-213ENST00000605875 AHDC1Q5TGY3 1603 aaPredicted RBP27.52■■■□□ 2
CCDC12-213ENST00000605875 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
CCDC12-213ENST00000605875 SPATA31A6Q5VVP1 1343 aa27.51■■□□□ 1.99
CCDC12-213ENST00000605875 SETBP1Q9Y6X0 1596 aa27.51■■□□□ 1.99
CCDC12-213ENST00000605875 NAIPQ13075 1403 aa27.5■■□□□ 1.99
CCDC12-213ENST00000605875 XRN1Q8IZH2 1706 aaKnown RBP27.48■■□□□ 1.99
CCDC12-213ENST00000605875 MEX3CQ5U5Q3 659 aaKnown RBP27.47■■□□□ 1.99
CCDC12-213ENST00000605875 BRINP3Q76B58 766 aa27.47■■□□□ 1.99
CCDC12-213ENST00000605875 LRP6O75581 1613 aa27.47■■□□□ 1.99
CCDC12-213ENST00000605875 DCCP43146 1447 aa27.46■■□□□ 1.99
CCDC12-213ENST00000605875 SHPRHQ149N8 1683 aa27.45■■□□□ 1.98
CCDC12-213ENST00000605875 METP08581 1390 aa27.45■■□□□ 1.98
CCDC12-213ENST00000605875 CLTCL1P53675 1640 aa27.45■■□□□ 1.98
CCDC12-213ENST00000605875 HFM1A2PYH4 1435 aa27.44■■□□□ 1.98
CCDC12-213ENST00000605875 SETD1AO15047 1707 aaKnown RBP27.42■■□□□ 1.98
CCDC12-213ENST00000605875 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
CCDC12-213ENST00000605875 KIF1BO60333 1816 aa27.4■■□□□ 1.98
CCDC12-213ENST00000605875 ZNF772Q68DY9 489 aaPredicted RBP27.4■■□□□ 1.98
CCDC12-213ENST00000605875 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.98
CCDC12-213ENST00000605875 MST1RQ04912 1400 aa27.39■■□□□ 1.97
CCDC12-213ENST00000605875 NUTM2BA6NNL0 878 aaPredicted RBP27.36■■□□□ 1.97
CCDC12-213ENST00000605875 NUTM2EB1AL46 878 aaPredicted RBP27.36■■□□□ 1.97
CCDC12-213ENST00000605875 NUTM2AQ8IVF1 878 aaPredicted RBP27.36■■□□□ 1.97
CCDC12-213ENST00000605875 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
CCDC12-213ENST00000605875 ADGRL3Q9HAR2 1447 aa27.34■■□□□ 1.97
CCDC12-213ENST00000605875 NHSL1Q5SYE7 1610 aa27.33■■□□□ 1.97
CCDC12-213ENST00000605875 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
CCDC12-213ENST00000605875 NALCNQ8IZF0 1738 aa27.31■■□□□ 1.96
CCDC12-213ENST00000605875 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
CCDC12-213ENST00000605875 LRRC59Q96AG4 307 aaKnown RBP27.31■■□□□ 1.96
CCDC12-213ENST00000605875 DDX17Q92841 729 aaKnown RBP27.28■■□□□ 1.96
CCDC12-213ENST00000605875 RXRBP28702 533 aa27.27■■□□□ 1.96
CCDC12-213ENST00000605875 SLC4A1APQ9BWU0 796 aaKnown RBP27.26■■□□□ 1.95
CCDC12-213ENST00000605875 AFF2P51816 1311 aa27.24■■□□□ 1.95
CCDC12-213ENST00000605875 RPGRIP1LQ68CZ1 1315 aa27.24■■□□□ 1.95
CCDC12-213ENST00000605875 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
CCDC12-213ENST00000605875 C1orf167Q5SNV9 1468 aa27.23■■□□□ 1.95
CCDC12-213ENST00000605875 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
CCDC12-213ENST00000605875 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
CCDC12-213ENST00000605875 UPF1Q92900 1129 aaKnown RBP eCLIP27.21■■□□□ 1.95
CCDC12-213ENST00000605875 PPLO60437 1756 aa27.19■■□□□ 1.94
CCDC12-213ENST00000605875 C8orf37Q96NL8 207 aa27.18■■□□□ 1.94
CCDC12-213ENST00000605875 CDK12Q9NYV4 1490 aaPredicted RBP27.17■■□□□ 1.94
CCDC12-213ENST00000605875 ORAI2Q96SN7 254 aa27.16■■□□□ 1.94
CCDC12-213ENST00000605875 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
CCDC12-213ENST00000605875 LAMC1P11047 1609 aa27.15■■□□□ 1.94
CCDC12-213ENST00000605875 FOXD1Q16676 465 aa27.14■■□□□ 1.94
CCDC12-213ENST00000605875 QTRT2Q9H974 415 aaKnown RBP27.13■■□□□ 1.93
CCDC12-213ENST00000605875 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
CCDC12-213ENST00000605875 ADAMTS2O95450 1211 aa27.11■■□□□ 1.93
CCDC12-213ENST00000605875 NGLY1Q96IV0 654 aa27.1■■□□□ 1.93
CCDC12-213ENST00000605875 RBM6P78332 1123 aaKnown RBP27.09■■□□□ 1.93
CCDC12-213ENST00000605875 ADGRF5Q8IZF2 1346 aa27.08■■□□□ 1.93
CCDC12-213ENST00000605875 CCDC144AA2RUR9 1427 aa27.07■■□□□ 1.92
CCDC12-213ENST00000605875 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms