RNA–Protein interactions for RNA: ENST00000605459.1

LINC01235-202, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 5

Gene LINC01235, Length 395 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-202ENST00000605459 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.99
LINC01235-202ENST00000605459 FCHSD2O94868 740 aa8.89□□□□□ -0.99
LINC01235-202ENST00000605459 EYA1Q99502 592 aa8.89□□□□□ -0.99
LINC01235-202ENST00000605459 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
LINC01235-202ENST00000605459 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
LINC01235-202ENST00000605459 LRCH3Q96II8 777 aa8.87□□□□□ -0.99
LINC01235-202ENST00000605459 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
LINC01235-202ENST00000605459 CFTRP13569 1480 aa8.87□□□□□ -0.99
LINC01235-202ENST00000605459 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
LINC01235-202ENST00000605459 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
LINC01235-202ENST00000605459 HIC1Q14526 733 aa8.85□□□□□ -0.99
LINC01235-202ENST00000605459 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
LINC01235-202ENST00000605459 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
LINC01235-202ENST00000605459 CCDC88BA6NC98 1476 aa8.83□□□□□ -1
LINC01235-202ENST00000605459 FECHP22830 423 aa8.83□□□□□ -1
LINC01235-202ENST00000605459 FAM161AQ3B820 660 aa8.83□□□□□ -1
LINC01235-202ENST00000605459 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
LINC01235-202ENST00000605459 GNPATO15228 680 aa8.82□□□□□ -1
LINC01235-202ENST00000605459 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
LINC01235-202ENST00000605459 GPIHBP1Q8IV16 184 aa8.81□□□□□ -1
LINC01235-202ENST00000605459 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
LINC01235-202ENST00000605459 IFFO2Q5TF58 517 aa8.8□□□□□ -1
LINC01235-202ENST00000605459 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
LINC01235-202ENST00000605459 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
LINC01235-202ENST00000605459 ITGBL1O95965 494 aaPredicted RBP8.79□□□□□ -1
LINC01235-202ENST00000605459 DNAJB2P25686 324 aa8.79□□□□□ -1
LINC01235-202ENST00000605459 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
LINC01235-202ENST00000605459 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
LINC01235-202ENST00000605459 RCCD1A6NED2 376 aa8.78□□□□□ -1
LINC01235-202ENST00000605459 PPP4CP60510 307 aa8.78□□□□□ -1
LINC01235-202ENST00000605459 TMEM134Q9H6X4 195 aa8.78□□□□□ -1
LINC01235-202ENST00000605459 THOC2Q8NI27 1593 aaKnown RBP8.78□□□□□ -1
LINC01235-202ENST00000605459 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
LINC01235-202ENST00000605459 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
LINC01235-202ENST00000605459 OATP04181 439 aa8.76□□□□□ -1.01
LINC01235-202ENST00000605459 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
LINC01235-202ENST00000605459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC01235-202ENST00000605459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
LINC01235-202ENST00000605459 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
LINC01235-202ENST00000605459 WDR62O43379 1518 aa8.75□□□□□ -1.01
LINC01235-202ENST00000605459 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
LINC01235-202ENST00000605459 RNF40O75150 1001 aa8.74□□□□□ -1.01
LINC01235-202ENST00000605459 APLP1P51693 650 aa8.74□□□□□ -1.01
LINC01235-202ENST00000605459 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
LINC01235-202ENST00000605459 KIF21AQ7Z4S6 1674 aa8.72□□□□□ -1.01
LINC01235-202ENST00000605459 A0A0G2JS52 829 aa8.71□□□□□ -1.02
LINC01235-202ENST00000605459 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
LINC01235-202ENST00000605459 NECTIN2Q92692 538 aa8.71□□□□□ -1.02
LINC01235-202ENST00000605459 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
LINC01235-202ENST00000605459 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
LINC01235-202ENST00000605459 LMOD2Q6P5Q4 547 aa8.7□□□□□ -1.02
LINC01235-202ENST00000605459 SLC10A3P09131 477 aa8.69□□□□□ -1.02
LINC01235-202ENST00000605459 KCNC4Q03721 635 aa8.69□□□□□ -1.02
LINC01235-202ENST00000605459 MTRQ99707 1265 aa8.69□□□□□ -1.02
LINC01235-202ENST00000605459 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
LINC01235-202ENST00000605459 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
LINC01235-202ENST00000605459 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
LINC01235-202ENST00000605459 IRF6O14896 467 aa8.66□□□□□ -1.02
LINC01235-202ENST00000605459 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
LINC01235-202ENST00000605459 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
LINC01235-202ENST00000605459 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
LINC01235-202ENST00000605459 ZNF516Q92618 1163 aa8.65□□□□□ -1.02
LINC01235-202ENST00000605459 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
LINC01235-202ENST00000605459 CFHP08603 1231 aa8.64□□□□□ -1.03
LINC01235-202ENST00000605459 PRR14Q9BWN1 585 aa8.64□□□□□ -1.03
LINC01235-202ENST00000605459 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
LINC01235-202ENST00000605459 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
LINC01235-202ENST00000605459 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
LINC01235-202ENST00000605459 SLC24A1O60721 1099 aa8.62□□□□□ -1.03
LINC01235-202ENST00000605459 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
LINC01235-202ENST00000605459 ZMYND10O75800 440 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 RGS20O76081 388 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 COPS2P61201 443 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 BLOC1S3Q6QNY0 202 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
LINC01235-202ENST00000605459 DNMBPQ6XZF7 1577 aa8.6□□□□□ -1.03
LINC01235-202ENST00000605459 DDX11L8A8MPP1 907 aa8.59□□□□□ -1.03
LINC01235-202ENST00000605459 ZPR1O75312 459 aa8.59□□□□□ -1.03
LINC01235-202ENST00000605459 NKX2-3Q8TAU0 364 aa8.59□□□□□ -1.03
LINC01235-202ENST00000605459 SOGA1O94964 1423 aa8.58□□□□□ -1.04
LINC01235-202ENST00000605459 ZNF608Q9ULD9 1512 aaPredicted RBP8.58□□□□□ -1.04
LINC01235-202ENST00000605459 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
LINC01235-202ENST00000605459 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
LINC01235-202ENST00000605459 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
LINC01235-202ENST00000605459 RDH13Q8NBN7 331 aa8.57□□□□□ -1.04
LINC01235-202ENST00000605459 TMUB1Q9BVT8 246 aa8.57□□□□□ -1.04
LINC01235-202ENST00000605459 GCGRP47871 477 aa8.56□□□□□ -1.04
LINC01235-202ENST00000605459 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
LINC01235-202ENST00000605459 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
LINC01235-202ENST00000605459 CD46P15529 392 aa8.55□□□□□ -1.04
LINC01235-202ENST00000605459 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
LINC01235-202ENST00000605459 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
LINC01235-202ENST00000605459 CUX1P39880 1505 aa8.54□□□□□ -1.04
LINC01235-202ENST00000605459 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01235-202ENST00000605459 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
LINC01235-202ENST00000605459 TLL1O43897 1013 aa8.54□□□□□ -1.04
LINC01235-202ENST00000605459 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
LINC01235-202ENST00000605459 FGD5Q6ZNL6 1462 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms