RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 ADGRB3O60242 1522 aa18.55■□□□□ 0.56
UBE3B-213ENST00000605142 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
UBE3B-213ENST00000605142 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
UBE3B-213ENST00000605142 MSH6P52701 1360 aa18.55■□□□□ 0.56
UBE3B-213ENST00000605142 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
UBE3B-213ENST00000605142 UNC13BO14795 1591 aa18.53■□□□□ 0.56
UBE3B-213ENST00000605142 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.55
UBE3B-213ENST00000605142 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
UBE3B-213ENST00000605142 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
UBE3B-213ENST00000605142 SLC52A1Q9NWF4 448 aa18.51■□□□□ 0.55
UBE3B-213ENST00000605142 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
UBE3B-213ENST00000605142 SPATA31A6Q5VVP1 1343 aa18.5■□□□□ 0.55
UBE3B-213ENST00000605142 GCC2Q8IWJ2 1684 aa18.5■□□□□ 0.55
UBE3B-213ENST00000605142 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
UBE3B-213ENST00000605142 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
UBE3B-213ENST00000605142 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
UBE3B-213ENST00000605142 E9PCH4 1651 aa18.48■□□□□ 0.55
UBE3B-213ENST00000605142 ROCK1Q13464 1354 aa18.48■□□□□ 0.55
UBE3B-213ENST00000605142 ZNF772Q68DY9 489 aaPredicted RBP18.48■□□□□ 0.55
UBE3B-213ENST00000605142 TMEM131LA2VDJ0 1609 aa18.48■□□□□ 0.55
UBE3B-213ENST00000605142 UPF1Q92900 1129 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBE3B-213ENST00000605142 COL16A1Q07092 1604 aaPredicted RBP18.47■□□□□ 0.55
UBE3B-213ENST00000605142 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
UBE3B-213ENST00000605142 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
UBE3B-213ENST00000605142 RBM33Q96EV2 1170 aaKnown RBP18.45■□□□□ 0.54
UBE3B-213ENST00000605142 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
UBE3B-213ENST00000605142 PLEKHG1Q9ULL1 1385 aa18.43■□□□□ 0.54
UBE3B-213ENST00000605142 ITGAEP38570 1179 aa18.42■□□□□ 0.54
UBE3B-213ENST00000605142 TBX22Q9Y458 520 aa18.42■□□□□ 0.54
UBE3B-213ENST00000605142 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
UBE3B-213ENST00000605142 CDK12Q9NYV4 1490 aaPredicted RBP18.41■□□□□ 0.54
UBE3B-213ENST00000605142 LRP6O75581 1613 aa18.41■□□□□ 0.54
UBE3B-213ENST00000605142 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
UBE3B-213ENST00000605142 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
UBE3B-213ENST00000605142 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
UBE3B-213ENST00000605142 BCANQ96GW7 911 aa18.39■□□□□ 0.53
UBE3B-213ENST00000605142 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
UBE3B-213ENST00000605142 RXRBP28702 533 aa18.37■□□□□ 0.53
UBE3B-213ENST00000605142 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
UBE3B-213ENST00000605142 PIK3R4Q99570 1358 aa18.37■□□□□ 0.53
UBE3B-213ENST00000605142 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
UBE3B-213ENST00000605142 NUP155O75694 1391 aa18.36■□□□□ 0.53
UBE3B-213ENST00000605142 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBE3B-213ENST00000605142 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-213ENST00000605142 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
UBE3B-213ENST00000605142 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.33■□□□□ 0.52
UBE3B-213ENST00000605142 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.52
UBE3B-213ENST00000605142 ATF3P18847 181 aa18.33■□□□□ 0.52
UBE3B-213ENST00000605142 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
UBE3B-213ENST00000605142 SRCAPQ6ZRS2 3230 aa18.32■□□□□ 0.52
UBE3B-213ENST00000605142 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
UBE3B-213ENST00000605142 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
UBE3B-213ENST00000605142 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
UBE3B-213ENST00000605142 DCCP43146 1447 aa18.3■□□□□ 0.52
UBE3B-213ENST00000605142 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
UBE3B-213ENST00000605142 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
UBE3B-213ENST00000605142 BRINP3Q76B58 766 aa18.28■□□□□ 0.52
UBE3B-213ENST00000605142 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
UBE3B-213ENST00000605142 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
UBE3B-213ENST00000605142 NAIPQ13075 1403 aa18.27■□□□□ 0.52
UBE3B-213ENST00000605142 CLTCL1P53675 1640 aa18.25■□□□□ 0.51
UBE3B-213ENST00000605142 AFF2P51816 1311 aa18.24■□□□□ 0.51
UBE3B-213ENST00000605142 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
UBE3B-213ENST00000605142 TRPM2O94759 1503 aa18.23■□□□□ 0.51
UBE3B-213ENST00000605142 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
UBE3B-213ENST00000605142 SETBP1Q9Y6X0 1596 aa18.22■□□□□ 0.51
UBE3B-213ENST00000605142 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
UBE3B-213ENST00000605142 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
UBE3B-213ENST00000605142 NHSL1Q5SYE7 1610 aa18.21■□□□□ 0.51
UBE3B-213ENST00000605142 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
UBE3B-213ENST00000605142 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
UBE3B-213ENST00000605142 NUTM2BA6NNL0 878 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-213ENST00000605142 NUTM2EB1AL46 878 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-213ENST00000605142 NUTM2AQ8IVF1 878 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-213ENST00000605142 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
UBE3B-213ENST00000605142 RGS12O14924 1447 aa18.19■□□□□ 0.5
UBE3B-213ENST00000605142 MST1RQ04912 1400 aa18.18■□□□□ 0.5
UBE3B-213ENST00000605142 FOXD1Q16676 465 aa18.18■□□□□ 0.5
UBE3B-213ENST00000605142 METP08581 1390 aa18.17■□□□□ 0.5
UBE3B-213ENST00000605142 NGLY1Q96IV0 654 aa18.17■□□□□ 0.5
UBE3B-213ENST00000605142 PNPLA6Q8IY17 1366 aa18.15■□□□□ 0.5
UBE3B-213ENST00000605142 KIF1BO60333 1816 aa18.14■□□□□ 0.5
UBE3B-213ENST00000605142 ATAD2Q6PL18 1390 aa18.14■□□□□ 0.49
UBE3B-213ENST00000605142 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
UBE3B-213ENST00000605142 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
UBE3B-213ENST00000605142 ADGRL3Q9HAR2 1447 aa18.11■□□□□ 0.49
UBE3B-213ENST00000605142 LAMC1P11047 1609 aa18.1■□□□□ 0.49
UBE3B-213ENST00000605142 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
UBE3B-213ENST00000605142 CCDC125Q86Z20 511 aa18.08■□□□□ 0.48
UBE3B-213ENST00000605142 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-213ENST00000605142 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
UBE3B-213ENST00000605142 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-213ENST00000605142 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
UBE3B-213ENST00000605142 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-213ENST00000605142 PPLO60437 1756 aa18.06■□□□□ 0.48
UBE3B-213ENST00000605142 EP400Q96L91 3159 aa18.05■□□□□ 0.48
UBE3B-213ENST00000605142 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
UBE3B-213ENST00000605142 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
UBE3B-213ENST00000605142 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
UBE3B-213ENST00000605142 USP21Q9UK80 565 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms