RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
IGHV3-29-201ENST00000604817 CDHR5Q9HBB8 845 aa7.22□□□□□ -1.25
IGHV3-29-201ENST00000604817 KCNV2Q8TDN2 545 aa7.21□□□□□ -1.26
IGHV3-29-201ENST00000604817 PRR14Q9BWN1 585 aa7.21□□□□□ -1.26
IGHV3-29-201ENST00000604817 ZNF516Q92618 1163 aa7.2□□□□□ -1.26
IGHV3-29-201ENST00000604817 ARHGEF1Q92888 912 aaKnown RBP7.2□□□□□ -1.26
IGHV3-29-201ENST00000604817 TMUB1Q9BVT8 246 aa7.2□□□□□ -1.26
IGHV3-29-201ENST00000604817 SWT1Q5T5J6 900 aaKnown RBP7.19□□□□□ -1.26
IGHV3-29-201ENST00000604817 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
IGHV3-29-201ENST00000604817 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
IGHV3-29-201ENST00000604817 LCE2BO14633 110 aa7.16□□□□□ -1.26
IGHV3-29-201ENST00000604817 ZPR1O75312 459 aa7.16□□□□□ -1.26
IGHV3-29-201ENST00000604817 COPS2P61201 443 aa7.16□□□□□ -1.26
IGHV3-29-201ENST00000604817 PDZRN3Q9UPQ7 1066 aa7.16□□□□□ -1.26
IGHV3-29-201ENST00000604817 EYA1Q99502 592 aa7.15□□□□□ -1.26
IGHV3-29-201ENST00000604817 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
IGHV3-29-201ENST00000604817 PCDHB3Q9Y5E6 796 aa7.14□□□□□ -1.27
IGHV3-29-201ENST00000604817 ABCC9O60706 1549 aa7.13□□□□□ -1.27
IGHV3-29-201ENST00000604817 DNAJB2P25686 324 aa7.13□□□□□ -1.27
IGHV3-29-201ENST00000604817 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
IGHV3-29-201ENST00000604817 SUPT5HO00267 1087 aaKnown RBP7.1□□□□□ -1.27
IGHV3-29-201ENST00000604817 KMT5BQ4FZB7 885 aa7.1□□□□□ -1.27
IGHV3-29-201ENST00000604817 ZNF787Q6DD87 383 aa7.1□□□□□ -1.27
IGHV3-29-201ENST00000604817 SMYD5Q6GMV2 418 aa7.1□□□□□ -1.27
IGHV3-29-201ENST00000604817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
IGHV3-29-201ENST00000604817 LMOD2Q6P5Q4 547 aa7.09□□□□□ -1.27
IGHV3-29-201ENST00000604817 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
IGHV3-29-201ENST00000604817 PODXL2Q9NZ53 605 aa7.09□□□□□ -1.27
IGHV3-29-201ENST00000604817 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
IGHV3-29-201ENST00000604817 SLC19A1P41440 591 aa7.08□□□□□ -1.28
IGHV3-29-201ENST00000604817 PTGDRQ13258 359 aa7.08□□□□□ -1.28
IGHV3-29-201ENST00000604817 BLOC1S3Q6QNY0 202 aa7.08□□□□□ -1.28
IGHV3-29-201ENST00000604817 ANKLE1Q8NAG6 615 aa7.08□□□□□ -1.28
IGHV3-29-201ENST00000604817 ACTN4O43707 911 aaKnown RBP7.07□□□□□ -1.28
IGHV3-29-201ENST00000604817 TESPA1A2RU30 521 aaPredicted RBP7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 MLLT3P42568 568 aaPredicted RBP7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 PRR20EP86478 221 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 PRR20CP86479 221 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 PRR20DP86480 221 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 PRR20BP86481 221 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 PRR20AP86496 221 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 ZNF598Q86UK7 904 aaKnown RBP7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 ADGRG1Q9Y653 693 aa7.06□□□□□ -1.28
IGHV3-29-201ENST00000604817 DGAT1O75907 488 aa7.05□□□□□ -1.28
IGHV3-29-201ENST00000604817 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
IGHV3-29-201ENST00000604817 SPRYD7Q5W111 196 aa7.05□□□□□ -1.28
IGHV3-29-201ENST00000604817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 RCCD1A6NED2 376 aa7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 NR1I2O75469 434 aa7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 ADH1BP00325 375 aa7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 CFHP08603 1231 aa7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
IGHV3-29-201ENST00000604817 SEMA3EO15041 775 aa7.03□□□□□ -1.28
IGHV3-29-201ENST00000604817 TLL1O43897 1013 aa7.03□□□□□ -1.28
IGHV3-29-201ENST00000604817 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
IGHV3-29-201ENST00000604817 RSPH4AQ5TD94 716 aa7.03□□□□□ -1.28
IGHV3-29-201ENST00000604817 TRIM67Q6ZTA4 783 aa7.03□□□□□ -1.28
IGHV3-29-201ENST00000604817 NUTM2FA1L443 756 aa7.02□□□□□ -1.29
IGHV3-29-201ENST00000604817 FCHSD2O94868 740 aa7.02□□□□□ -1.29
IGHV3-29-201ENST00000604817 S1PR4O95977 384 aa7.01□□□□□ -1.29
IGHV3-29-201ENST00000604817 OATP04181 439 aa7.01□□□□□ -1.29
IGHV3-29-201ENST00000604817 ZNF697Q5TEC3 545 aa7.01□□□□□ -1.29
IGHV3-29-201ENST00000604817 EMID1Q96A84 441 aaPredicted RBP7.01□□□□□ -1.29
IGHV3-29-201ENST00000604817 MYT1Q01538 1121 aa6.99□□□□□ -1.29
IGHV3-29-201ENST00000604817 ZNF775Q96BV0 537 aaPredicted RBP6.99□□□□□ -1.29
IGHV3-29-201ENST00000604817 SLC6A16Q9GZN6 736 aa6.99□□□□□ -1.29
IGHV3-29-201ENST00000604817 PPEF1O14829 653 aaPredicted RBP6.98□□□□□ -1.29
IGHV3-29-201ENST00000604817 SLC10A3P09131 477 aa6.98□□□□□ -1.29
IGHV3-29-201ENST00000604817 LIAT1Q6ZQX7 453 aa6.98□□□□□ -1.29
IGHV3-29-201ENST00000604817 FAM187AA6NFU0 413 aa6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 GDF9O60383 454 aa6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 UBTFP17480 764 aaKnown RBP6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 HIC1Q14526 733 aa6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 PXYLP1Q8TE99 480 aa6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 ZC3H15Q8WU90 426 aaKnown RBP6.97□□□□□ -1.29
IGHV3-29-201ENST00000604817 FAM161AQ3B820 660 aa6.96□□□□□ -1.3
IGHV3-29-201ENST00000604817 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
IGHV3-29-201ENST00000604817 SPSB2Q99619 263 aa6.95□□□□□ -1.3
IGHV3-29-201ENST00000604817 TNFRSF10AO00220 468 aa6.94□□□□□ -1.3
IGHV3-29-201ENST00000604817 RPIAP49247 311 aa6.94□□□□□ -1.3
IGHV3-29-201ENST00000604817 TRIM26Q12899 539 aaPredicted RBP6.94□□□□□ -1.3
IGHV3-29-201ENST00000604817 METTL3Q86U44 580 aaKnown RBP6.94□□□□□ -1.3
IGHV3-29-201ENST00000604817 ZMYND10O75800 440 aa6.93□□□□□ -1.3
IGHV3-29-201ENST00000604817 HRCP23327 699 aa6.91□□□□□ -1.3
IGHV3-29-201ENST00000604817 PUS10Q3MIT2 529 aaKnown RBP6.91□□□□□ -1.3
IGHV3-29-201ENST00000604817 PLA2G2CQ5R387 149 aa6.91□□□□□ -1.3
IGHV3-29-201ENST00000604817 GPIHBP1Q8IV16 184 aa6.91□□□□□ -1.3
IGHV3-29-201ENST00000604817 CD2BP2O95400 341 aaKnown RBP6.9□□□□□ -1.3
IGHV3-29-201ENST00000604817 NEUROD2Q15784 382 aa6.9□□□□□ -1.3
IGHV3-29-201ENST00000604817 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
IGHV3-29-201ENST00000604817 RDH13Q8NBN7 331 aa6.9□□□□□ -1.3
IGHV3-29-201ENST00000604817 AAASQ9NRG9 546 aa6.9□□□□□ -1.3
IGHV3-29-201ENST00000604817 GNPATO15228 680 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 ATP6V1AP38606 617 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 MORN1Q5T089 497 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 BARGINQ6ZT62 677 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 PKD2L1Q9P0L9 805 aa6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 SALL2Q9Y467 1007 aaPredicted RBP6.89□□□□□ -1.31
IGHV3-29-201ENST00000604817 POTECB2RU33 542 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms