RNA–Protein interactions for RNA: ENST00000604404.5

FXYD3-208, Transcript of FXYD domain containing ion transport regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXYD3, Length 1,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXYD3-208ENST00000604404 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
FXYD3-208ENST00000604404 LTBP4Q8N2S1 1624 aa20.54■□□□□ 0.88
FXYD3-208ENST00000604404 MYO5BQ9ULV0 1848 aa20.52■□□□□ 0.88
FXYD3-208ENST00000604404 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.87
FXYD3-208ENST00000604404 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
FXYD3-208ENST00000604404 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
FXYD3-208ENST00000604404 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
FXYD3-208ENST00000604404 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
FXYD3-208ENST00000604404 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
FXYD3-208ENST00000604404 HDGFP51858 240 aaKnown RBP20.49■□□□□ 0.87
FXYD3-208ENST00000604404 CCDC144AA2RUR9 1427 aa20.48■□□□□ 0.87
FXYD3-208ENST00000604404 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
FXYD3-208ENST00000604404 CERKQ8TCT0 537 aa20.45■□□□□ 0.86
FXYD3-208ENST00000604404 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
FXYD3-208ENST00000604404 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
FXYD3-208ENST00000604404 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
FXYD3-208ENST00000604404 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
FXYD3-208ENST00000604404 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
FXYD3-208ENST00000604404 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
FXYD3-208ENST00000604404 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
FXYD3-208ENST00000604404 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
FXYD3-208ENST00000604404 KIF1BO60333 1816 aa20.41■□□□□ 0.86
FXYD3-208ENST00000604404 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
FXYD3-208ENST00000604404 SETBP1Q9Y6X0 1596 aa20.39■□□□□ 0.85
FXYD3-208ENST00000604404 CPS1P31327 1500 aa20.38■□□□□ 0.85
FXYD3-208ENST00000604404 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
FXYD3-208ENST00000604404 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
FXYD3-208ENST00000604404 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
FXYD3-208ENST00000604404 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
FXYD3-208ENST00000604404 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
FXYD3-208ENST00000604404 KCNA6P17658 529 aa20.36■□□□□ 0.85
FXYD3-208ENST00000604404 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
FXYD3-208ENST00000604404 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
FXYD3-208ENST00000604404 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
FXYD3-208ENST00000604404 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
FXYD3-208ENST00000604404 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
FXYD3-208ENST00000604404 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
FXYD3-208ENST00000604404 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
FXYD3-208ENST00000604404 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
FXYD3-208ENST00000604404 PPLO60437 1756 aa20.32■□□□□ 0.84
FXYD3-208ENST00000604404 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
FXYD3-208ENST00000604404 BCANQ96GW7 911 aa20.31■□□□□ 0.84
FXYD3-208ENST00000604404 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
FXYD3-208ENST00000604404 METP08581 1390 aa20.31■□□□□ 0.84
FXYD3-208ENST00000604404 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
FXYD3-208ENST00000604404 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
FXYD3-208ENST00000604404 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
FXYD3-208ENST00000604404 NKTRP30414 1462 aaKnown RBP20.28■□□□□ 0.84
FXYD3-208ENST00000604404 STAC3Q96MF2 364 aa20.27■□□□□ 0.84
FXYD3-208ENST00000604404 MYOM2P54296 1465 aa20.27■□□□□ 0.84
FXYD3-208ENST00000604404 PIK3C2GO75747 1445 aa20.27■□□□□ 0.84
FXYD3-208ENST00000604404 L3MBTL2Q969R5 705 aa20.27■□□□□ 0.83
FXYD3-208ENST00000604404 CHD2O14647 1828 aaKnown RBP20.26■□□□□ 0.83
FXYD3-208ENST00000604404 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
FXYD3-208ENST00000604404 SETD1AO15047 1707 aaKnown RBP20.25■□□□□ 0.83
FXYD3-208ENST00000604404 ILDR1Q86SU0 546 aaPredicted RBP20.24■□□□□ 0.83
FXYD3-208ENST00000604404 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
FXYD3-208ENST00000604404 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
FXYD3-208ENST00000604404 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
FXYD3-208ENST00000604404 XRN1Q8IZH2 1706 aaKnown RBP20.21■□□□□ 0.83
FXYD3-208ENST00000604404 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
FXYD3-208ENST00000604404 C14orf93Q9H972 538 aaKnown RBP20.21■□□□□ 0.83
FXYD3-208ENST00000604404 NCOA3Q9Y6Q9 1424 aa20.2■□□□□ 0.82
FXYD3-208ENST00000604404 XIRP1Q702N8 1843 aaKnown RBP20.19■□□□□ 0.82
FXYD3-208ENST00000604404 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
FXYD3-208ENST00000604404 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
FXYD3-208ENST00000604404 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
FXYD3-208ENST00000604404 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
FXYD3-208ENST00000604404 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
FXYD3-208ENST00000604404 TECPR2O15040 1411 aa20.15■□□□□ 0.82
FXYD3-208ENST00000604404 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
FXYD3-208ENST00000604404 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
FXYD3-208ENST00000604404 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.81
FXYD3-208ENST00000604404 LRPPRCP42704 1394 aaKnown RBP20.13■□□□□ 0.81
FXYD3-208ENST00000604404 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
FXYD3-208ENST00000604404 TMEM132EQ6IEE7 984 aa20.12■□□□□ 0.81
FXYD3-208ENST00000604404 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
FXYD3-208ENST00000604404 TOM1O60784 492 aa20.11■□□□□ 0.81
FXYD3-208ENST00000604404 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
FXYD3-208ENST00000604404 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
FXYD3-208ENST00000604404 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
FXYD3-208ENST00000604404 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
FXYD3-208ENST00000604404 LAMC1P11047 1609 aa20.08■□□□□ 0.81
FXYD3-208ENST00000604404 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
FXYD3-208ENST00000604404 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.8
FXYD3-208ENST00000604404 MSH6P52701 1360 aa20.07■□□□□ 0.8
FXYD3-208ENST00000604404 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
FXYD3-208ENST00000604404 DCCP43146 1447 aa20.05■□□□□ 0.8
FXYD3-208ENST00000604404 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
FXYD3-208ENST00000604404 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
FXYD3-208ENST00000604404 STK26Q9P289 416 aa20.03■□□□□ 0.8
FXYD3-208ENST00000604404 SLAIN2Q9P270 581 aa20.02■□□□□ 0.8
FXYD3-208ENST00000604404 GPRASP1Q5JY77 1395 aa20.02■□□□□ 0.8
FXYD3-208ENST00000604404 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
FXYD3-208ENST00000604404 KNDC1Q76NI1 1749 aa20.02■□□□□ 0.8
FXYD3-208ENST00000604404 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.79
FXYD3-208ENST00000604404 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.79
FXYD3-208ENST00000604404 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
FXYD3-208ENST00000604404 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
FXYD3-208ENST00000604404 PIP4K2BP78356 416 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms