RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 FAM50AQ14320 339 aaKnown RBP26.26■■□□□ 1.79
CCDC12-210ENST00000604181 ZFYVE9O95405 1425 aa26.25■■□□□ 1.79
CCDC12-210ENST00000604181 SLC52A1Q9NWF4 448 aa26.25■■□□□ 1.79
CCDC12-210ENST00000604181 NKTRP30414 1462 aaKnown RBP26.23■■□□□ 1.79
CCDC12-210ENST00000604181 RPRD2Q5VT52 1461 aaKnown RBP26.22■■□□□ 1.79
CCDC12-210ENST00000604181 GCC2Q8IWJ2 1684 aa26.21■■□□□ 1.79
CCDC12-210ENST00000604181 BCANQ96GW7 911 aa26.19■■□□□ 1.78
CCDC12-210ENST00000604181 TMEM131LA2VDJ0 1609 aa26.18■■□□□ 1.78
CCDC12-210ENST00000604181 POTEAQ6S8J7 498 aa26.18■■□□□ 1.78
CCDC12-210ENST00000604181 RIMS2Q9UQ26 1411 aa26.18■■□□□ 1.78
CCDC12-210ENST00000604181 PLEKHG1Q9ULL1 1385 aa26.18■■□□□ 1.78
CCDC12-210ENST00000604181 CHD2O14647 1828 aaKnown RBP26.17■■□□□ 1.78
CCDC12-210ENST00000604181 UNC13BO14795 1591 aa26.15■■□□□ 1.78
CCDC12-210ENST00000604181 MSH6P52701 1360 aa26.14■■□□□ 1.78
CCDC12-210ENST00000604181 SLAIN2Q9P270 581 aa26.12■■□□□ 1.77
CCDC12-210ENST00000604181 E9PCH4 1651 aa26.12■■□□□ 1.77
CCDC12-210ENST00000604181 PPP1R15AO75807 674 aaPredicted RBP26.11■■□□□ 1.77
CCDC12-210ENST00000604181 NUTM2DQ5VT03 806 aaPredicted RBP26.11■■□□□ 1.77
CCDC12-210ENST00000604181 ADAMTS13Q76LX8 1427 aa26.1■■□□□ 1.77
CCDC12-210ENST00000604181 PHLPP1O60346 1717 aa26.09■■□□□ 1.77
CCDC12-210ENST00000604181 CHGAP10645 457 aaKnown RBP26.08■■□□□ 1.77
CCDC12-210ENST00000604181 TBX22Q9Y458 520 aa26.07■■□□□ 1.76
CCDC12-210ENST00000604181 COL16A1Q07092 1604 aaPredicted RBP26.04■■□□□ 1.76
CCDC12-210ENST00000604181 IQGAP3Q86VI3 1631 aa26.03■■□□□ 1.76
CCDC12-210ENST00000604181 HDGFP51858 240 aaKnown RBP26.02■■□□□ 1.76
CCDC12-210ENST00000604181 ROCK1Q13464 1354 aa26.02■■□□□ 1.76
CCDC12-210ENST00000604181 JCADQ9P266 1359 aa26.02■■□□□ 1.76
CCDC12-210ENST00000604181 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.01■■□□□ 1.75
CCDC12-210ENST00000604181 SIPA1L2Q9P2F8 1722 aaPredicted RBP26■■□□□ 1.75
CCDC12-210ENST00000604181 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
CCDC12-210ENST00000604181 SETD1AO15047 1707 aaKnown RBP25.99■■□□□ 1.75
CCDC12-210ENST00000604181 NCOA3Q9Y6Q9 1424 aa25.98■■□□□ 1.75
CCDC12-210ENST00000604181 LRP6O75581 1613 aa25.98■■□□□ 1.75
CCDC12-210ENST00000604181 DIP2AQ14689 1571 aa25.98■■□□□ 1.75
CCDC12-210ENST00000604181 NUP155O75694 1391 aa25.97■■□□□ 1.75
CCDC12-210ENST00000604181 C14orf37Q86TY3 774 aa25.96■■□□□ 1.75
CCDC12-210ENST00000604181 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
CCDC12-210ENST00000604181 ITGAEP38570 1179 aa25.94■■□□□ 1.74
CCDC12-210ENST00000604181 C19orf44Q9H6X5 657 aa25.93■■□□□ 1.74
CCDC12-210ENST00000604181 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
CCDC12-210ENST00000604181 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
CCDC12-210ENST00000604181 AMOTL2Q9Y2J4 779 aa25.92■■□□□ 1.74
CCDC12-210ENST00000604181 TRPM2O94759 1503 aa25.92■■□□□ 1.74
CCDC12-210ENST00000604181 CADPS2Q86UW7 1296 aa25.9■■□□□ 1.74
CCDC12-210ENST00000604181 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
CCDC12-210ENST00000604181 ATF3P18847 181 aa25.89■■□□□ 1.74
CCDC12-210ENST00000604181 BRINP3Q76B58 766 aa25.87■■□□□ 1.73
CCDC12-210ENST00000604181 XRN1Q8IZH2 1706 aaKnown RBP25.87■■□□□ 1.73
CCDC12-210ENST00000604181 SHPRHQ149N8 1683 aa25.86■■□□□ 1.73
CCDC12-210ENST00000604181 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
CCDC12-210ENST00000604181 SPHKAPQ2M3C7 1700 aa25.85■■□□□ 1.73
CCDC12-210ENST00000604181 SETBP1Q9Y6X0 1596 aa25.85■■□□□ 1.73
CCDC12-210ENST00000604181 METP08581 1390 aa25.82■■□□□ 1.72
CCDC12-210ENST00000604181 ASXL1Q8IXJ9 1541 aa25.8■■□□□ 1.72
CCDC12-210ENST00000604181 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
CCDC12-210ENST00000604181 DCCP43146 1447 aa25.8■■□□□ 1.72
CCDC12-210ENST00000604181 MST1RQ04912 1400 aa25.8■■□□□ 1.72
CCDC12-210ENST00000604181 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
CCDC12-210ENST00000604181 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
CCDC12-210ENST00000604181 NUTM2BA6NNL0 878 aaPredicted RBP25.76■■□□□ 1.71
CCDC12-210ENST00000604181 NUTM2EB1AL46 878 aaPredicted RBP25.76■■□□□ 1.71
CCDC12-210ENST00000604181 NUTM2AQ8IVF1 878 aaPredicted RBP25.76■■□□□ 1.71
CCDC12-210ENST00000604181 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
CCDC12-210ENST00000604181 NEXMIFQ5QGS0 1516 aa25.76■■□□□ 1.71
CCDC12-210ENST00000604181 ZNF772Q68DY9 489 aaPredicted RBP25.75■■□□□ 1.71
CCDC12-210ENST00000604181 DDX17Q92841 729 aaKnown RBP25.75■■□□□ 1.71
CCDC12-210ENST00000604181 NHSL1Q5SYE7 1610 aa25.74■■□□□ 1.71
CCDC12-210ENST00000604181 SETD5Q9C0A6 1442 aa25.72■■□□□ 1.71
CCDC12-210ENST00000604181 NALCNQ8IZF0 1738 aa25.72■■□□□ 1.71
CCDC12-210ENST00000604181 ADGRL3Q9HAR2 1447 aa25.71■■□□□ 1.71
CCDC12-210ENST00000604181 UPF1Q92900 1129 aaKnown RBP eCLIP25.71■■□□□ 1.71
CCDC12-210ENST00000604181 AFF2P51816 1311 aa25.67■■□□□ 1.7
CCDC12-210ENST00000604181 NAIPQ13075 1403 aa25.67■■□□□ 1.7
CCDC12-210ENST00000604181 RXRBP28702 533 aa25.66■■□□□ 1.7
CCDC12-210ENST00000604181 PNPLA6Q8IY17 1366 aa25.65■■□□□ 1.7
CCDC12-210ENST00000604181 KIF1BO60333 1816 aa25.64■■□□□ 1.7
CCDC12-210ENST00000604181 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
CCDC12-210ENST00000604181 LRRC59Q96AG4 307 aaKnown RBP25.63■■□□□ 1.69
CCDC12-210ENST00000604181 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
CCDC12-210ENST00000604181 ROBO2Q9HCK4 1378 aa25.61■■□□□ 1.69
CCDC12-210ENST00000604181 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
CCDC12-210ENST00000604181 C8orf37Q96NL8 207 aa25.59■■□□□ 1.69
CCDC12-210ENST00000604181 PTCH1Q13635 1447 aa25.58■■□□□ 1.69
CCDC12-210ENST00000604181 ORAI2Q96SN7 254 aa25.57■■□□□ 1.68
CCDC12-210ENST00000604181 RGS12O14924 1447 aa25.56■■□□□ 1.68
CCDC12-210ENST00000604181 LAMC1P11047 1609 aa25.55■■□□□ 1.68
CCDC12-210ENST00000604181 QTRT2Q9H974 415 aaKnown RBP25.53■■□□□ 1.68
CCDC12-210ENST00000604181 SRCAPQ6ZRS2 3230 aa25.53■■□□□ 1.68
CCDC12-210ENST00000604181 VGFO15240 615 aaPredicted RBP25.52■■□□□ 1.68
CCDC12-210ENST00000604181 ADAMTS2O95450 1211 aa25.52■■□□□ 1.68
CCDC12-210ENST00000604181 SOS2Q07890 1332 aaPredicted RBP25.52■■□□□ 1.68
CCDC12-210ENST00000604181 PRAG1Q86YV5 1406 aa25.52■■□□□ 1.68
CCDC12-210ENST00000604181 PPLO60437 1756 aa25.51■■□□□ 1.67
CCDC12-210ENST00000604181 HFM1A2PYH4 1435 aa25.5■■□□□ 1.67
CCDC12-210ENST00000604181 RBM6P78332 1123 aaKnown RBP25.49■■□□□ 1.67
CCDC12-210ENST00000604181 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
CCDC12-210ENST00000604181 FOXD1Q16676 465 aa25.47■■□□□ 1.67
CCDC12-210ENST00000604181 NGLY1Q96IV0 654 aa25.47■■□□□ 1.67
CCDC12-210ENST00000604181 RPGRIP1LQ68CZ1 1315 aa25.46■■□□□ 1.67
CCDC12-210ENST00000604181 ADGRF5Q8IZF2 1346 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms