RNA–Protein interactions for RNA: ENST00000602775.5

SRA1-205, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 1,466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-205ENST00000602775 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
SRA1-205ENST00000602775 NOS1P29475 1434 aa23.36■■□□□ 1.33
SRA1-205ENST00000602775 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
SRA1-205ENST00000602775 LRP6O75581 1613 aa23.31■■□□□ 1.32
SRA1-205ENST00000602775 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
SRA1-205ENST00000602775 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
SRA1-205ENST00000602775 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
SRA1-205ENST00000602775 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
SRA1-205ENST00000602775 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
SRA1-205ENST00000602775 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
SRA1-205ENST00000602775 ZFYVE9O95405 1425 aa23.28■■□□□ 1.32
SRA1-205ENST00000602775 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.32
SRA1-205ENST00000602775 FGD6Q6ZV73 1430 aa23.26■■□□□ 1.31
SRA1-205ENST00000602775 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
SRA1-205ENST00000602775 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
SRA1-205ENST00000602775 SPATA31A6Q5VVP1 1343 aa23.26■■□□□ 1.31
SRA1-205ENST00000602775 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
SRA1-205ENST00000602775 ZNF772Q68DY9 489 aaPredicted RBP23.24■■□□□ 1.31
SRA1-205ENST00000602775 MYO5BQ9ULV0 1848 aa23.22■■□□□ 1.31
SRA1-205ENST00000602775 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
SRA1-205ENST00000602775 TBX22Q9Y458 520 aa23.21■■□□□ 1.31
SRA1-205ENST00000602775 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
SRA1-205ENST00000602775 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
SRA1-205ENST00000602775 APLP2Q06481 763 aa23.2■■□□□ 1.3
SRA1-205ENST00000602775 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
SRA1-205ENST00000602775 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
SRA1-205ENST00000602775 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
SRA1-205ENST00000602775 AHDC1Q5TGY3 1603 aaPredicted RBP23.18■■□□□ 1.3
SRA1-205ENST00000602775 TMEM131LA2VDJ0 1609 aa23.18■■□□□ 1.3
SRA1-205ENST00000602775 ATF3P18847 181 aa23.17■■□□□ 1.3
SRA1-205ENST00000602775 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
SRA1-205ENST00000602775 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.17■■□□□ 1.3
SRA1-205ENST00000602775 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
SRA1-205ENST00000602775 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
SRA1-205ENST00000602775 RXRBP28702 533 aa23.17■■□□□ 1.3
SRA1-205ENST00000602775 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
SRA1-205ENST00000602775 C19orf44Q9H6X5 657 aa23.17■■□□□ 1.3
SRA1-205ENST00000602775 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
SRA1-205ENST00000602775 SHPRHQ149N8 1683 aa23.16■■□□□ 1.3
SRA1-205ENST00000602775 ADGRL2O95490 1459 aa23.16■■□□□ 1.3
SRA1-205ENST00000602775 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
SRA1-205ENST00000602775 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
SRA1-205ENST00000602775 BRINP3Q76B58 766 aa23.12■■□□□ 1.29
SRA1-205ENST00000602775 DIP2AQ14689 1571 aa23.11■■□□□ 1.29
SRA1-205ENST00000602775 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
SRA1-205ENST00000602775 AFF2P51816 1311 aa23.09■■□□□ 1.29
SRA1-205ENST00000602775 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
SRA1-205ENST00000602775 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
SRA1-205ENST00000602775 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
SRA1-205ENST00000602775 CDK12Q9NYV4 1490 aaPredicted RBP23.07■■□□□ 1.28
SRA1-205ENST00000602775 TRPM2O94759 1503 aa23.05■■□□□ 1.28
SRA1-205ENST00000602775 ASXL1Q8IXJ9 1541 aa23.03■■□□□ 1.28
SRA1-205ENST00000602775 E9PCH4 1651 aa23.02■■□□□ 1.28
SRA1-205ENST00000602775 C8orf37Q96NL8 207 aa23.01■■□□□ 1.27
SRA1-205ENST00000602775 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
SRA1-205ENST00000602775 UNC13BO14795 1591 aa23.01■■□□□ 1.27
SRA1-205ENST00000602775 RGS12O14924 1447 aa23■■□□□ 1.27
SRA1-205ENST00000602775 DCCP43146 1447 aa23■■□□□ 1.27
SRA1-205ENST00000602775 MST1RQ04912 1400 aa22.99■■□□□ 1.27
SRA1-205ENST00000602775 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
SRA1-205ENST00000602775 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
SRA1-205ENST00000602775 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
SRA1-205ENST00000602775 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
SRA1-205ENST00000602775 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
SRA1-205ENST00000602775 XRN1Q8IZH2 1706 aaKnown RBP22.95■■□□□ 1.26
SRA1-205ENST00000602775 PNPLA6Q8IY17 1366 aa22.95■■□□□ 1.26
SRA1-205ENST00000602775 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
SRA1-205ENST00000602775 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
SRA1-205ENST00000602775 METP08581 1390 aa22.92■■□□□ 1.26
SRA1-205ENST00000602775 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
SRA1-205ENST00000602775 NUP155O75694 1391 aa22.9■■□□□ 1.26
SRA1-205ENST00000602775 ADAMTS2O95450 1211 aa22.9■■□□□ 1.26
SRA1-205ENST00000602775 SETBP1Q9Y6X0 1596 aa22.9■■□□□ 1.26
SRA1-205ENST00000602775 NGLY1Q96IV0 654 aa22.89■■□□□ 1.25
SRA1-205ENST00000602775 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
SRA1-205ENST00000602775 ADGRL3Q9HAR2 1447 aa22.88■■□□□ 1.25
SRA1-205ENST00000602775 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
SRA1-205ENST00000602775 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
SRA1-205ENST00000602775 ATAD2Q6PL18 1390 aa22.84■■□□□ 1.25
SRA1-205ENST00000602775 NALCNQ8IZF0 1738 aa22.83■■□□□ 1.25
SRA1-205ENST00000602775 C1orf167Q5SNV9 1468 aa22.83■■□□□ 1.24
SRA1-205ENST00000602775 USP21Q9UK80 565 aa22.82■■□□□ 1.24
SRA1-205ENST00000602775 ITGAEP38570 1179 aa22.79■■□□□ 1.24
SRA1-205ENST00000602775 ORAI2Q96SN7 254 aa22.79■■□□□ 1.24
SRA1-205ENST00000602775 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
SRA1-205ENST00000602775 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
SRA1-205ENST00000602775 ZRANB1Q9UGI0 708 aa22.76■■□□□ 1.23
SRA1-205ENST00000602775 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
SRA1-205ENST00000602775 NEXMIFQ5QGS0 1516 aa22.75■■□□□ 1.23
SRA1-205ENST00000602775 LAMC1P11047 1609 aa22.73■■□□□ 1.23
SRA1-205ENST00000602775 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
SRA1-205ENST00000602775 ATRNO75882 1429 aa22.73■■□□□ 1.23
SRA1-205ENST00000602775 PTCH1Q13635 1447 aa22.73■■□□□ 1.23
SRA1-205ENST00000602775 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
SRA1-205ENST00000602775 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
SRA1-205ENST00000602775 FOXD1Q16676 465 aa22.71■■□□□ 1.23
SRA1-205ENST00000602775 COL22A1Q8NFW1 1626 aaPredicted RBP22.66■■□□□ 1.22
SRA1-205ENST00000602775 MYOM2P54296 1465 aa22.65■■□□□ 1.22
SRA1-205ENST00000602775 BCL9LQ86UU0 1499 aa22.65■■□□□ 1.22
SRA1-205ENST00000602775 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms