RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 NUTM2DQ5VT03 806 aaPredicted RBP27.31■■□□□ 1.96
UBE2E3-209ENST00000602710 UHRF1BP1Q6BDS2 1440 aa27.28■■□□□ 1.96
UBE2E3-209ENST00000602710 ZNF142P52746 1687 aaPredicted RBP27.27■■□□□ 1.96
UBE2E3-209ENST00000602710 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
UBE2E3-209ENST00000602710 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.96
UBE2E3-209ENST00000602710 PRAG1Q86YV5 1406 aa27.26■■□□□ 1.95
UBE2E3-209ENST00000602710 STAC3Q96MF2 364 aa27.26■■□□□ 1.95
UBE2E3-209ENST00000602710 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
UBE2E3-209ENST00000602710 MYOM2P54296 1465 aa27.26■■□□□ 1.95
UBE2E3-209ENST00000602710 THEMISQ8N1K5 641 aaPredicted RBP27.25■■□□□ 1.95
UBE2E3-209ENST00000602710 TMEM2Q9UHN6 1383 aa27.24■■□□□ 1.95
UBE2E3-209ENST00000602710 ZFYVE9O95405 1425 aa27.23■■□□□ 1.95
UBE2E3-209ENST00000602710 VGFO15240 615 aaPredicted RBP27.22■■□□□ 1.95
UBE2E3-209ENST00000602710 NRXN1Q9ULB1 1477 aa27.21■■□□□ 1.95
UBE2E3-209ENST00000602710 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
UBE2E3-209ENST00000602710 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
UBE2E3-209ENST00000602710 SLIT1O75093 1534 aa27.18■■□□□ 1.94
UBE2E3-209ENST00000602710 LTKP29376 864 aa27.18■■□□□ 1.94
UBE2E3-209ENST00000602710 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.18■■□□□ 1.94
UBE2E3-209ENST00000602710 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
UBE2E3-209ENST00000602710 HDGFP51858 240 aaKnown RBP27.16■■□□□ 1.94
UBE2E3-209ENST00000602710 TXNDC2Q86VQ3 553 aa27.16■■□□□ 1.94
UBE2E3-209ENST00000602710 PIK3C2GO75747 1445 aa27.15■■□□□ 1.94
UBE2E3-209ENST00000602710 NBPF1Q3BBV0 1214 aa27.14■■□□□ 1.93
UBE2E3-209ENST00000602710 CFAP70Q5T0N1 1121 aa27.14■■□□□ 1.93
UBE2E3-209ENST00000602710 RALGAPBQ86X10 1494 aa27.13■■□□□ 1.93
UBE2E3-209ENST00000602710 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
UBE2E3-209ENST00000602710 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
UBE2E3-209ENST00000602710 ROCK2O75116 1388 aaKnown RBP27.08■■□□□ 1.93
UBE2E3-209ENST00000602710 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
UBE2E3-209ENST00000602710 SCAF11Q99590 1463 aaKnown RBP27.08■■□□□ 1.93
UBE2E3-209ENST00000602710 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
UBE2E3-209ENST00000602710 HSPA2P54652 639 aa27.06■■□□□ 1.92
UBE2E3-209ENST00000602710 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
UBE2E3-209ENST00000602710 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
UBE2E3-209ENST00000602710 BCANQ96GW7 911 aa27.05■■□□□ 1.92
UBE2E3-209ENST00000602710 CARD11Q9BXL7 1154 aa27.05■■□□□ 1.92
UBE2E3-209ENST00000602710 PLEKHG1Q9ULL1 1385 aa27.05■■□□□ 1.92
UBE2E3-209ENST00000602710 IQGAP1P46940 1657 aa27.03■■□□□ 1.92
UBE2E3-209ENST00000602710 ALKQ9UM73 1620 aa27.03■■□□□ 1.92
UBE2E3-209ENST00000602710 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
UBE2E3-209ENST00000602710 SETBP1Q9Y6X0 1596 aa27.03■■□□□ 1.92
UBE2E3-209ENST00000602710 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
UBE2E3-209ENST00000602710 LAMC1P11047 1609 aa27.01■■□□□ 1.91
UBE2E3-209ENST00000602710 NCKAP5LQ9HCH0 1330 aa27.01■■□□□ 1.91
UBE2E3-209ENST00000602710 SETD1AO15047 1707 aaKnown RBP26.99■■□□□ 1.91
UBE2E3-209ENST00000602710 ADAMTS13Q76LX8 1427 aa26.98■■□□□ 1.91
UBE2E3-209ENST00000602710 ADGRB1O14514 1584 aa26.98■■□□□ 1.91
UBE2E3-209ENST00000602710 POLR1AO95602 1720 aaPredicted RBP26.98■■□□□ 1.91
UBE2E3-209ENST00000602710 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
UBE2E3-209ENST00000602710 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
UBE2E3-209ENST00000602710 HIRIP3Q9BW71 556 aaPredicted RBP26.96■■□□□ 1.91
UBE2E3-209ENST00000602710 HSPA5P11021 654 aaKnown RBP26.94■■□□□ 1.9
UBE2E3-209ENST00000602710 EIF4G2P78344 907 aaKnown RBP eCLIP26.94■■□□□ 1.9
UBE2E3-209ENST00000602710 USP47Q96K76 1375 aa26.94■■□□□ 1.9
UBE2E3-209ENST00000602710 MED14O60244 1454 aa26.94■■□□□ 1.9
UBE2E3-209ENST00000602710 METP08581 1390 aa26.93■■□□□ 1.9
UBE2E3-209ENST00000602710 NPHP4O75161 1426 aaPredicted RBP26.92■■□□□ 1.9
UBE2E3-209ENST00000602710 TBX22Q9Y458 520 aa26.9■■□□□ 1.9
UBE2E3-209ENST00000602710 STK26Q9P289 416 aa26.89■■□□□ 1.9
UBE2E3-209ENST00000602710 TRAK1Q9UPV9 953 aa26.88■■□□□ 1.89
UBE2E3-209ENST00000602710 STRCQ7RTU9 1775 aa26.88■■□□□ 1.89
UBE2E3-209ENST00000602710 YTHDC2Q9H6S0 1430 aaKnown RBP26.87■■□□□ 1.89
UBE2E3-209ENST00000602710 DIP2AQ14689 1571 aa26.87■■□□□ 1.89
UBE2E3-209ENST00000602710 ST20-MTHFSA0A0A6YYL1 179 aa26.85■■□□□ 1.89
UBE2E3-209ENST00000602710 LRPPRCP42704 1394 aaKnown RBP26.83■■□□□ 1.89
UBE2E3-209ENST00000602710 PTPRUQ92729 1446 aa26.82■■□□□ 1.88
UBE2E3-209ENST00000602710 ZNF316A6NFI3 1004 aaPredicted RBP26.82■■□□□ 1.88
UBE2E3-209ENST00000602710 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
UBE2E3-209ENST00000602710 ABCC11Q96J66 1382 aa26.79■■□□□ 1.88
UBE2E3-209ENST00000602710 EIF3AQ14152 1382 aaKnown RBP26.78■■□□□ 1.88
UBE2E3-209ENST00000602710 AMOTL2Q9Y2J4 779 aa26.77■■□□□ 1.88
UBE2E3-209ENST00000602710 PIK3R4Q99570 1358 aa26.76■■□□□ 1.87
UBE2E3-209ENST00000602710 TESK2Q96S53 571 aa26.75■■□□□ 1.87
UBE2E3-209ENST00000602710 KNDC1Q76NI1 1749 aa26.75■■□□□ 1.87
UBE2E3-209ENST00000602710 CHD2O14647 1828 aaKnown RBP26.75■■□□□ 1.87
UBE2E3-209ENST00000602710 CENPJQ9HC77 1338 aaPredicted RBP26.74■■□□□ 1.87
UBE2E3-209ENST00000602710 PRAM1Q96QH2 718 aa26.74■■□□□ 1.87
UBE2E3-209ENST00000602710 TECPR2O15040 1411 aa26.73■■□□□ 1.87
UBE2E3-209ENST00000602710 DLC1Q96QB1 1528 aa26.73■■□□□ 1.87
UBE2E3-209ENST00000602710 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
UBE2E3-209ENST00000602710 SAFB2Q14151 953 aaKnown RBP eCLIP26.72■■□□□ 1.87
UBE2E3-209ENST00000602710 XRN1Q8IZH2 1706 aaKnown RBP26.72■■□□□ 1.87
UBE2E3-209ENST00000602710 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
UBE2E3-209ENST00000602710 C11orf95C9JLR9 678 aaPredicted RBP26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 PLEKHH1Q9ULM0 1364 aa26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 CPS1P31327 1500 aa26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 QRICH2Q9H0J4 1663 aa26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 KCNA6P17658 529 aa26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 POGKQ9P215 609 aa26.71■■□□□ 1.87
UBE2E3-209ENST00000602710 SIRT1Q96EB6 747 aa26.68■■□□□ 1.86
UBE2E3-209ENST00000602710 FAM135BQ49AJ0 1406 aa26.67■■□□□ 1.86
UBE2E3-209ENST00000602710 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
UBE2E3-209ENST00000602710 PTCH1Q13635 1447 aa26.64■■□□□ 1.86
UBE2E3-209ENST00000602710 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
UBE2E3-209ENST00000602710 MINK1Q8N4C8 1332 aaPredicted RBP26.63■■□□□ 1.85
UBE2E3-209ENST00000602710 SBNO2Q9Y2G9 1366 aa26.63■■□□□ 1.85
UBE2E3-209ENST00000602710 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
UBE2E3-209ENST00000602710 WASHC2AQ641Q2 1341 aa26.63■■□□□ 1.85
UBE2E3-209ENST00000602710 TMF1P82094 1093 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms