RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 SPHKAPQ2M3C7 1700 aa33.25■■■□□ 2.91
UBE2E3-206ENST00000602479 CHD2O14647 1828 aaKnown RBP33.23■■■□□ 2.91
UBE2E3-206ENST00000602479 NUP155O75694 1391 aa33.22■■■□□ 2.91
UBE2E3-206ENST00000602479 ILDR2Q71H61 639 aa33.22■■■□□ 2.91
UBE2E3-206ENST00000602479 RIMS2Q9UQ26 1411 aa33.2■■■□□ 2.91
UBE2E3-206ENST00000602479 MED1Q15648 1581 aaPredicted RBP33.2■■■□□ 2.91
UBE2E3-206ENST00000602479 SLC26A8Q96RN1 970 aa33.19■■■□□ 2.9
UBE2E3-206ENST00000602479 NKTRP30414 1462 aaKnown RBP33.18■■■□□ 2.9
UBE2E3-206ENST00000602479 PLEKHG1Q9ULL1 1385 aa33.18■■■□□ 2.9
UBE2E3-206ENST00000602479 KCNA6P17658 529 aa33.14■■■□□ 2.9
UBE2E3-206ENST00000602479 TMEM94Q12767 1356 aa33.13■■■□□ 2.89
UBE2E3-206ENST00000602479 DIP2AQ14689 1571 aa33.1■■■□□ 2.89
UBE2E3-206ENST00000602479 NAIPQ13075 1403 aa33.09■■■□□ 2.89
UBE2E3-206ENST00000602479 PPP1R15AO75807 674 aaPredicted RBP33.07■■■□□ 2.88
UBE2E3-206ENST00000602479 CHGAP10645 457 aaKnown RBP33.07■■■□□ 2.88
UBE2E3-206ENST00000602479 BCANQ96GW7 911 aa33.06■■■□□ 2.88
UBE2E3-206ENST00000602479 ROBO1Q9Y6N7 1651 aa33.05■■■□□ 2.88
UBE2E3-206ENST00000602479 HDGFP51858 240 aaKnown RBP33.05■■■□□ 2.88
UBE2E3-206ENST00000602479 SENP3Q9H4L4 574 aaPredicted RBP33.05■■■□□ 2.88
UBE2E3-206ENST00000602479 ADAMTS13Q76LX8 1427 aa33.03■■■□□ 2.88
UBE2E3-206ENST00000602479 CLTCL1P53675 1640 aa33.03■■■□□ 2.88
UBE2E3-206ENST00000602479 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.03■■■□□ 2.88
UBE2E3-206ENST00000602479 PROSER2Q86WR7 435 aaPredicted RBP33.02■■■□□ 2.88
UBE2E3-206ENST00000602479 KIF1BO60333 1816 aa33.01■■■□□ 2.87
UBE2E3-206ENST00000602479 NRXN3Q9Y4C0 1643 aa33.01■■■□□ 2.87
UBE2E3-206ENST00000602479 TRPM2O94759 1503 aa33.01■■■□□ 2.87
UBE2E3-206ENST00000602479 RBM33Q96EV2 1170 aaKnown RBP32.99■■■□□ 2.87
UBE2E3-206ENST00000602479 HFM1A2PYH4 1435 aa32.98■■■□□ 2.87
UBE2E3-206ENST00000602479 FAM135BQ49AJ0 1406 aa32.98■■■□□ 2.87
UBE2E3-206ENST00000602479 NUTM2DQ5VT03 806 aaPredicted RBP32.97■■■□□ 2.87
UBE2E3-206ENST00000602479 TBX22Q9Y458 520 aa32.97■■■□□ 2.87
UBE2E3-206ENST00000602479 SOCS7O14512 581 aa32.96■■■□□ 2.87
UBE2E3-206ENST00000602479 SETBP1Q9Y6X0 1596 aa32.95■■■□□ 2.86
UBE2E3-206ENST00000602479 MSH6P52701 1360 aa32.93■■■□□ 2.86
UBE2E3-206ENST00000602479 PIK3R4Q99570 1358 aa32.92■■■□□ 2.86
UBE2E3-206ENST00000602479 XRN1Q8IZH2 1706 aaKnown RBP32.91■■■□□ 2.86
UBE2E3-206ENST00000602479 NEXMIFQ5QGS0 1516 aa32.9■■■□□ 2.86
UBE2E3-206ENST00000602479 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.9■■■□□ 2.86
UBE2E3-206ENST00000602479 NCOA3Q9Y6Q9 1424 aa32.86■■■□□ 2.85
UBE2E3-206ENST00000602479 PHLPP1O60346 1717 aa32.85■■■□□ 2.85
UBE2E3-206ENST00000602479 PTPRUQ92729 1446 aa32.85■■■□□ 2.85
UBE2E3-206ENST00000602479 ZNF326Q5BKZ1 582 aaKnown RBP32.79■■■□□ 2.84
UBE2E3-206ENST00000602479 SETD1AO15047 1707 aaKnown RBP32.79■■■□□ 2.84
UBE2E3-206ENST00000602479 PPLO60437 1756 aa32.78■■■□□ 2.84
UBE2E3-206ENST00000602479 SLAIN2Q9P270 581 aa32.77■■■□□ 2.84
UBE2E3-206ENST00000602479 TRIM52Q96A61 297 aa32.76■■■□□ 2.83
UBE2E3-206ENST00000602479 PHF23Q9BUL5 403 aaPredicted RBP32.76■■■□□ 2.83
UBE2E3-206ENST00000602479 COL16A1Q07092 1604 aaPredicted RBP32.75■■■□□ 2.83
UBE2E3-206ENST00000602479 AMOTL2Q9Y2J4 779 aa32.74■■■□□ 2.83
UBE2E3-206ENST00000602479 METP08581 1390 aa32.7■■■□□ 2.83
UBE2E3-206ENST00000602479 C14orf37Q86TY3 774 aa32.7■■■□□ 2.83
UBE2E3-206ENST00000602479 NALCNQ8IZF0 1738 aa32.7■■■□□ 2.83
UBE2E3-206ENST00000602479 SLC4A1APQ9BWU0 796 aaKnown RBP32.69■■■□□ 2.82
UBE2E3-206ENST00000602479 AHDC1Q5TGY3 1603 aaPredicted RBP32.68■■■□□ 2.82
UBE2E3-206ENST00000602479 C19orf44Q9H6X5 657 aa32.67■■■□□ 2.82
UBE2E3-206ENST00000602479 DCCP43146 1447 aa32.67■■■□□ 2.82
UBE2E3-206ENST00000602479 CADPS2Q86UW7 1296 aa32.64■■■□□ 2.82
UBE2E3-206ENST00000602479 IFT172Q9UG01 1749 aa32.64■■■□□ 2.82
UBE2E3-206ENST00000602479 ATF3P18847 181 aa32.61■■■□□ 2.81
UBE2E3-206ENST00000602479 SHPRHQ149N8 1683 aa32.61■■■□□ 2.81
UBE2E3-206ENST00000602479 RGS17Q9UGC6 210 aaPredicted RBP32.58■■■□□ 2.81
UBE2E3-206ENST00000602479 NHSL1Q5SYE7 1610 aa32.58■■■□□ 2.81
UBE2E3-206ENST00000602479 JCADQ9P266 1359 aa32.58■■■□□ 2.81
UBE2E3-206ENST00000602479 ADGRL3Q9HAR2 1447 aa32.57■■■□□ 2.8
UBE2E3-206ENST00000602479 RPGRIP1LQ68CZ1 1315 aa32.55■■■□□ 2.8
UBE2E3-206ENST00000602479 MST1RQ04912 1400 aa32.55■■■□□ 2.8
UBE2E3-206ENST00000602479 FOXD1Q16676 465 aa32.55■■■□□ 2.8
UBE2E3-206ENST00000602479 ASXL1Q8IXJ9 1541 aa32.55■■■□□ 2.8
UBE2E3-206ENST00000602479 PTCH1Q13635 1447 aa32.54■■■□□ 2.8
UBE2E3-206ENST00000602479 VGFO15240 615 aaPredicted RBP32.54■■■□□ 2.8
UBE2E3-206ENST00000602479 PRAG1Q86YV5 1406 aa32.53■■■□□ 2.8
UBE2E3-206ENST00000602479 CCDC144AA2RUR9 1427 aa32.52■■■□□ 2.8
UBE2E3-206ENST00000602479 BRINP3Q76B58 766 aa32.49■■■□□ 2.79
UBE2E3-206ENST00000602479 SPATA31E1Q6ZUB1 1445 aa32.49■■■□□ 2.79
UBE2E3-206ENST00000602479 MPHOSPH9Q99550 1183 aa32.48■■■□□ 2.79
UBE2E3-206ENST00000602479 LRP6O75581 1613 aa32.47■■■□□ 2.79
UBE2E3-206ENST00000602479 ROBO2Q9HCK4 1378 aa32.45■■■□□ 2.78
UBE2E3-206ENST00000602479 SETD5Q9C0A6 1442 aa32.43■■■□□ 2.78
UBE2E3-206ENST00000602479 LAMC1P11047 1609 aa32.42■■■□□ 2.78
UBE2E3-206ENST00000602479 KNDC1Q76NI1 1749 aa32.4■■■□□ 2.78
UBE2E3-206ENST00000602479 SPATA31A6Q5VVP1 1343 aa32.4■■■□□ 2.78
UBE2E3-206ENST00000602479 POTEAQ6S8J7 498 aa32.38■■■□□ 2.77
UBE2E3-206ENST00000602479 ADGRF5Q8IZF2 1346 aa32.37■■■□□ 2.77
UBE2E3-206ENST00000602479 ACIN1Q9UKV3 1341 aaKnown RBP32.36■■■□□ 2.77
UBE2E3-206ENST00000602479 C1orf167Q5SNV9 1468 aa32.35■■■□□ 2.77
UBE2E3-206ENST00000602479 ANKRD30BQ9BXX2 1392 aa32.35■■■□□ 2.77
UBE2E3-206ENST00000602479 CDC42BPGQ6DT37 1551 aa32.35■■■□□ 2.77
UBE2E3-206ENST00000602479 RGL3Q3MIN7 710 aa32.33■■■□□ 2.77
UBE2E3-206ENST00000602479 PIK3C2GO75747 1445 aa32.33■■■□□ 2.77
UBE2E3-206ENST00000602479 RAB3GAP2Q9H2M9 1393 aa32.32■■■□□ 2.76
UBE2E3-206ENST00000602479 TECPR2O15040 1411 aa32.3■■■□□ 2.76
UBE2E3-206ENST00000602479 DDX17Q92841 729 aaKnown RBP32.25■■■□□ 2.75
UBE2E3-206ENST00000602479 MYOM2P54296 1465 aa32.24■■■□□ 2.75
UBE2E3-206ENST00000602479 NRXN1Q9ULB1 1477 aa32.24■■■□□ 2.75
UBE2E3-206ENST00000602479 LRPPRCP42704 1394 aaKnown RBP32.23■■■□□ 2.75
UBE2E3-206ENST00000602479 MEX3CQ5U5Q3 659 aaKnown RBP32.23■■■□□ 2.75
UBE2E3-206ENST00000602479 PNPLA6Q8IY17 1366 aa32.21■■■□□ 2.75
UBE2E3-206ENST00000602479 FMN2Q9NZ56 1722 aa32.21■■■□□ 2.75
UBE2E3-206ENST00000602479 LRRC59Q96AG4 307 aaKnown RBP32.21■■■□□ 2.75
UBE2E3-206ENST00000602479 ABCC11Q96J66 1382 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms