RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 KCNA6P17658 529 aa23.38■■□□□ 1.33
SFXN2-204ENST00000602287 ZFYVE9O95405 1425 aa23.38■■□□□ 1.33
SFXN2-204ENST00000602287 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
SFXN2-204ENST00000602287 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
SFXN2-204ENST00000602287 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
SFXN2-204ENST00000602287 PLEKHG1Q9ULL1 1385 aa23.34■■□□□ 1.33
SFXN2-204ENST00000602287 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.33
SFXN2-204ENST00000602287 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.32
SFXN2-204ENST00000602287 BCANQ96GW7 911 aa23.31■■□□□ 1.32
SFXN2-204ENST00000602287 FAM135BQ49AJ0 1406 aa23.31■■□□□ 1.32
SFXN2-204ENST00000602287 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
SFXN2-204ENST00000602287 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.3■■□□□ 1.32
SFXN2-204ENST00000602287 PROSER2Q86WR7 435 aaPredicted RBP23.29■■□□□ 1.32
SFXN2-204ENST00000602287 NUP155O75694 1391 aa23.28■■□□□ 1.32
SFXN2-204ENST00000602287 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
SFXN2-204ENST00000602287 ROBO1Q9Y6N7 1651 aa23.26■■□□□ 1.31
SFXN2-204ENST00000602287 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
SFXN2-204ENST00000602287 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
SFXN2-204ENST00000602287 ITGAEP38570 1179 aa23.25■■□□□ 1.31
SFXN2-204ENST00000602287 MSH6P52701 1360 aa23.25■■□□□ 1.31
SFXN2-204ENST00000602287 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
SFXN2-204ENST00000602287 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
SFXN2-204ENST00000602287 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
SFXN2-204ENST00000602287 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
SFXN2-204ENST00000602287 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
SFXN2-204ENST00000602287 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
SFXN2-204ENST00000602287 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
SFXN2-204ENST00000602287 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
SFXN2-204ENST00000602287 RBM33Q96EV2 1170 aaKnown RBP23.18■■□□□ 1.3
SFXN2-204ENST00000602287 TRPM2O94759 1503 aa23.18■■□□□ 1.3
SFXN2-204ENST00000602287 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
SFXN2-204ENST00000602287 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
SFXN2-204ENST00000602287 SETBP1Q9Y6X0 1596 aa23.12■■□□□ 1.29
SFXN2-204ENST00000602287 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
SFXN2-204ENST00000602287 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
SFXN2-204ENST00000602287 NAIPQ13075 1403 aa23.1■■□□□ 1.29
SFXN2-204ENST00000602287 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
SFXN2-204ENST00000602287 KIF1BO60333 1816 aa23.1■■□□□ 1.29
SFXN2-204ENST00000602287 CLTCL1P53675 1640 aa23.08■■□□□ 1.29
SFXN2-204ENST00000602287 C14orf37Q86TY3 774 aa23.08■■□□□ 1.29
SFXN2-204ENST00000602287 XRN1Q8IZH2 1706 aaKnown RBP23.08■■□□□ 1.28
SFXN2-204ENST00000602287 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
SFXN2-204ENST00000602287 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
SFXN2-204ENST00000602287 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
SFXN2-204ENST00000602287 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
SFXN2-204ENST00000602287 AMOTL2Q9Y2J4 779 aa23.04■■□□□ 1.28
SFXN2-204ENST00000602287 HFM1A2PYH4 1435 aa23.04■■□□□ 1.28
SFXN2-204ENST00000602287 DCCP43146 1447 aa23.04■■□□□ 1.28
SFXN2-204ENST00000602287 PTPRUQ92729 1446 aa23.04■■□□□ 1.28
SFXN2-204ENST00000602287 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
SFXN2-204ENST00000602287 JCADQ9P266 1359 aa23.03■■□□□ 1.28
SFXN2-204ENST00000602287 ATF3P18847 181 aa23.03■■□□□ 1.28
SFXN2-204ENST00000602287 RGS17Q9UGC6 210 aaPredicted RBP23.03■■□□□ 1.28
SFXN2-204ENST00000602287 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
SFXN2-204ENST00000602287 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
SFXN2-204ENST00000602287 METP08581 1390 aa22.95■■□□□ 1.26
SFXN2-204ENST00000602287 SPATA31A6Q5VVP1 1343 aa22.94■■□□□ 1.26
SFXN2-204ENST00000602287 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
SFXN2-204ENST00000602287 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
SFXN2-204ENST00000602287 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
SFXN2-204ENST00000602287 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
SFXN2-204ENST00000602287 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
SFXN2-204ENST00000602287 PPLO60437 1756 aa22.91■■□□□ 1.26
SFXN2-204ENST00000602287 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
SFXN2-204ENST00000602287 VGFO15240 615 aaPredicted RBP22.9■■□□□ 1.26
SFXN2-204ENST00000602287 POTEAQ6S8J7 498 aa22.9■■□□□ 1.26
SFXN2-204ENST00000602287 BRINP3Q76B58 766 aa22.9■■□□□ 1.26
SFXN2-204ENST00000602287 ASXL1Q8IXJ9 1541 aa22.9■■□□□ 1.26
SFXN2-204ENST00000602287 MST1RQ04912 1400 aa22.9■■□□□ 1.26
SFXN2-204ENST00000602287 RPGRIP1LQ68CZ1 1315 aa22.89■■□□□ 1.26
SFXN2-204ENST00000602287 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
SFXN2-204ENST00000602287 PRAG1Q86YV5 1406 aa22.87■■□□□ 1.25
SFXN2-204ENST00000602287 LRP6O75581 1613 aa22.86■■□□□ 1.25
SFXN2-204ENST00000602287 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
SFXN2-204ENST00000602287 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
SFXN2-204ENST00000602287 LAMC1P11047 1609 aa22.79■■□□□ 1.24
SFXN2-204ENST00000602287 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
SFXN2-204ENST00000602287 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
SFXN2-204ENST00000602287 IFT172Q9UG01 1749 aa22.78■■□□□ 1.24
SFXN2-204ENST00000602287 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
SFXN2-204ENST00000602287 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
SFXN2-204ENST00000602287 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
SFXN2-204ENST00000602287 C1orf167Q5SNV9 1468 aa22.76■■□□□ 1.23
SFXN2-204ENST00000602287 ANKRD30BQ9BXX2 1392 aa22.73■■□□□ 1.23
SFXN2-204ENST00000602287 SPATA31E1Q6ZUB1 1445 aa22.73■■□□□ 1.23
SFXN2-204ENST00000602287 FOXD1Q16676 465 aa22.72■■□□□ 1.23
SFXN2-204ENST00000602287 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
SFXN2-204ENST00000602287 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
SFXN2-204ENST00000602287 NUTM2BA6NNL0 878 aaPredicted RBP22.7■■□□□ 1.22
SFXN2-204ENST00000602287 NUTM2EB1AL46 878 aaPredicted RBP22.7■■□□□ 1.22
SFXN2-204ENST00000602287 NUTM2AQ8IVF1 878 aaPredicted RBP22.7■■□□□ 1.22
SFXN2-204ENST00000602287 PNPLA6Q8IY17 1366 aa22.7■■□□□ 1.22
SFXN2-204ENST00000602287 KNDC1Q76NI1 1749 aa22.7■■□□□ 1.22
SFXN2-204ENST00000602287 TECPR2O15040 1411 aa22.68■■□□□ 1.22
SFXN2-204ENST00000602287 CDK12Q9NYV4 1490 aaPredicted RBP22.67■■□□□ 1.22
SFXN2-204ENST00000602287 ADGRF5Q8IZF2 1346 aa22.66■■□□□ 1.22
SFXN2-204ENST00000602287 DDX17Q92841 729 aaKnown RBP22.66■■□□□ 1.22
SFXN2-204ENST00000602287 SOS2Q07890 1332 aaPredicted RBP22.65■■□□□ 1.22
SFXN2-204ENST00000602287 RGL3Q3MIN7 710 aa22.65■■□□□ 1.22
SFXN2-204ENST00000602287 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms