RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 IQGAP3Q86VI3 1631 aa17.48■□□□□ 0.39
ZNF544-219ENST00000602260 KCNA6P17658 529 aa17.48■□□□□ 0.39
ZNF544-219ENST00000602260 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
ZNF544-219ENST00000602260 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
ZNF544-219ENST00000602260 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
ZNF544-219ENST00000602260 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
ZNF544-219ENST00000602260 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
ZNF544-219ENST00000602260 TMEM94Q12767 1356 aa17.47■□□□□ 0.39
ZNF544-219ENST00000602260 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
ZNF544-219ENST00000602260 E9PCH4 1651 aa17.45■□□□□ 0.38
ZNF544-219ENST00000602260 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
ZNF544-219ENST00000602260 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
ZNF544-219ENST00000602260 DIP2AQ14689 1571 aa17.44■□□□□ 0.38
ZNF544-219ENST00000602260 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
ZNF544-219ENST00000602260 SLC26A8Q96RN1 970 aa17.43■□□□□ 0.38
ZNF544-219ENST00000602260 NAIPQ13075 1403 aa17.43■□□□□ 0.38
ZNF544-219ENST00000602260 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
ZNF544-219ENST00000602260 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
ZNF544-219ENST00000602260 MSH6P52701 1360 aa17.4■□□□□ 0.38
ZNF544-219ENST00000602260 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
ZNF544-219ENST00000602260 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
ZNF544-219ENST00000602260 BCANQ96GW7 911 aa17.4■□□□□ 0.38
ZNF544-219ENST00000602260 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
ZNF544-219ENST00000602260 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
ZNF544-219ENST00000602260 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
ZNF544-219ENST00000602260 HFM1A2PYH4 1435 aa17.38■□□□□ 0.37
ZNF544-219ENST00000602260 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
ZNF544-219ENST00000602260 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
ZNF544-219ENST00000602260 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
ZNF544-219ENST00000602260 TRPM2O94759 1503 aa17.35■□□□□ 0.37
ZNF544-219ENST00000602260 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
ZNF544-219ENST00000602260 PHLPP1O60346 1717 aa17.34■□□□□ 0.37
ZNF544-219ENST00000602260 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
ZNF544-219ENST00000602260 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
ZNF544-219ENST00000602260 NUTM2DQ5VT03 806 aaPredicted RBP17.29■□□□□ 0.36
ZNF544-219ENST00000602260 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
ZNF544-219ENST00000602260 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
ZNF544-219ENST00000602260 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
ZNF544-219ENST00000602260 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
ZNF544-219ENST00000602260 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
ZNF544-219ENST00000602260 JCADQ9P266 1359 aa17.28■□□□□ 0.36
ZNF544-219ENST00000602260 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.35
ZNF544-219ENST00000602260 AHDC1Q5TGY3 1603 aaPredicted RBP17.26■□□□□ 0.35
ZNF544-219ENST00000602260 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
ZNF544-219ENST00000602260 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
ZNF544-219ENST00000602260 DCCP43146 1447 aa17.26■□□□□ 0.35
ZNF544-219ENST00000602260 CADPS2Q86UW7 1296 aa17.25■□□□□ 0.35
ZNF544-219ENST00000602260 RGS17Q9UGC6 210 aaPredicted RBP17.25■□□□□ 0.35
ZNF544-219ENST00000602260 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
ZNF544-219ENST00000602260 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
ZNF544-219ENST00000602260 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
ZNF544-219ENST00000602260 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
ZNF544-219ENST00000602260 KIF1BO60333 1816 aa17.22■□□□□ 0.35
ZNF544-219ENST00000602260 ATF3P18847 181 aa17.22■□□□□ 0.35
ZNF544-219ENST00000602260 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
ZNF544-219ENST00000602260 PTPRUQ92729 1446 aa17.21■□□□□ 0.34
ZNF544-219ENST00000602260 FOXD1Q16676 465 aa17.2■□□□□ 0.34
ZNF544-219ENST00000602260 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
ZNF544-219ENST00000602260 NEXMIFQ5QGS0 1516 aa17.2■□□□□ 0.34
ZNF544-219ENST00000602260 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
ZNF544-219ENST00000602260 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
ZNF544-219ENST00000602260 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
ZNF544-219ENST00000602260 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
ZNF544-219ENST00000602260 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
ZNF544-219ENST00000602260 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
ZNF544-219ENST00000602260 ADGRL3Q9HAR2 1447 aa17.15■□□□□ 0.34
ZNF544-219ENST00000602260 LRP6O75581 1613 aa17.14■□□□□ 0.33
ZNF544-219ENST00000602260 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
ZNF544-219ENST00000602260 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
ZNF544-219ENST00000602260 MST1RQ04912 1400 aa17.13■□□□□ 0.33
ZNF544-219ENST00000602260 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
ZNF544-219ENST00000602260 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
ZNF544-219ENST00000602260 METP08581 1390 aa17.13■□□□□ 0.33
ZNF544-219ENST00000602260 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
ZNF544-219ENST00000602260 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
ZNF544-219ENST00000602260 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
ZNF544-219ENST00000602260 PRAG1Q86YV5 1406 aa17.11■□□□□ 0.33
ZNF544-219ENST00000602260 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
ZNF544-219ENST00000602260 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
ZNF544-219ENST00000602260 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
ZNF544-219ENST00000602260 PPLO60437 1756 aa17.08■□□□□ 0.33
ZNF544-219ENST00000602260 LAMC1P11047 1609 aa17.07■□□□□ 0.32
ZNF544-219ENST00000602260 HRCP23327 699 aa17.07■□□□□ 0.32
ZNF544-219ENST00000602260 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
ZNF544-219ENST00000602260 SPATA31E1Q6ZUB1 1445 aa17.04■□□□□ 0.32
ZNF544-219ENST00000602260 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
ZNF544-219ENST00000602260 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
ZNF544-219ENST00000602260 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
ZNF544-219ENST00000602260 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
ZNF544-219ENST00000602260 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
ZNF544-219ENST00000602260 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
ZNF544-219ENST00000602260 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
ZNF544-219ENST00000602260 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
ZNF544-219ENST00000602260 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
ZNF544-219ENST00000602260 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
ZNF544-219ENST00000602260 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
ZNF544-219ENST00000602260 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
ZNF544-219ENST00000602260 RXRBP28702 533 aa16.97■□□□□ 0.31
ZNF544-219ENST00000602260 AFF2P51816 1311 aa16.96■□□□□ 0.31
ZNF544-219ENST00000602260 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms