RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
PSMC4-206ENST00000601697 STAC3Q96MF2 364 aa19.03■□□□□ 0.64
PSMC4-206ENST00000601697 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
PSMC4-206ENST00000601697 MADDQ8WXG6 1647 aa19.02■□□□□ 0.64
PSMC4-206ENST00000601697 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
PSMC4-206ENST00000601697 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
PSMC4-206ENST00000601697 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
PSMC4-206ENST00000601697 ABCC3O15438 1527 aa18.98■□□□□ 0.63
PSMC4-206ENST00000601697 GGT6Q6P531 493 aa18.98■□□□□ 0.63
PSMC4-206ENST00000601697 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
PSMC4-206ENST00000601697 AGLP35573 1532 aa18.97■□□□□ 0.63
PSMC4-206ENST00000601697 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
PSMC4-206ENST00000601697 NPATQ14207 1427 aa18.96■□□□□ 0.63
PSMC4-206ENST00000601697 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
PSMC4-206ENST00000601697 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
PSMC4-206ENST00000601697 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
PSMC4-206ENST00000601697 MYOM2P54296 1465 aa18.95■□□□□ 0.62
PSMC4-206ENST00000601697 PARD3Q8TEW0 1356 aa18.95■□□□□ 0.62
PSMC4-206ENST00000601697 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
PSMC4-206ENST00000601697 KIF1BO60333 1816 aa18.93■□□□□ 0.62
PSMC4-206ENST00000601697 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
PSMC4-206ENST00000601697 ADGRB3O60242 1522 aa18.92■□□□□ 0.62
PSMC4-206ENST00000601697 INSRP06213 1382 aa18.92■□□□□ 0.62
PSMC4-206ENST00000601697 ZC3H13Q5T200 1668 aaKnown RBP18.91■□□□□ 0.62
PSMC4-206ENST00000601697 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
PSMC4-206ENST00000601697 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
PSMC4-206ENST00000601697 TMF1P82094 1093 aa18.9■□□□□ 0.62
PSMC4-206ENST00000601697 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
PSMC4-206ENST00000601697 SCAF11Q99590 1463 aaKnown RBP18.89■□□□□ 0.61
PSMC4-206ENST00000601697 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
PSMC4-206ENST00000601697 B4GALNT3Q6L9W6 998 aa18.88■□□□□ 0.61
PSMC4-206ENST00000601697 TESK2Q96S53 571 aa18.88■□□□□ 0.61
PSMC4-206ENST00000601697 NOS1P29475 1434 aa18.87■□□□□ 0.61
PSMC4-206ENST00000601697 ARHGAP31Q2M1Z3 1444 aa18.87■□□□□ 0.61
PSMC4-206ENST00000601697 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
PSMC4-206ENST00000601697 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
PSMC4-206ENST00000601697 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
PSMC4-206ENST00000601697 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
PSMC4-206ENST00000601697 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.61
PSMC4-206ENST00000601697 ADGRF5Q8IZF2 1346 aa18.83■□□□□ 0.6
PSMC4-206ENST00000601697 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
PSMC4-206ENST00000601697 SYNMO15061 1565 aa18.82■□□□□ 0.6
PSMC4-206ENST00000601697 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
PSMC4-206ENST00000601697 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
PSMC4-206ENST00000601697 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
PSMC4-206ENST00000601697 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
PSMC4-206ENST00000601697 BLMP54132 1417 aaPredicted RBP18.79■□□□□ 0.6
PSMC4-206ENST00000601697 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
PSMC4-206ENST00000601697 PPLO60437 1756 aa18.78■□□□□ 0.6
PSMC4-206ENST00000601697 CFAP70Q5T0N1 1121 aa18.78■□□□□ 0.6
PSMC4-206ENST00000601697 PANK3Q9H999 370 aa18.78■□□□□ 0.6
PSMC4-206ENST00000601697 MLECQ14165 292 aa18.77■□□□□ 0.6
PSMC4-206ENST00000601697 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
PSMC4-206ENST00000601697 PIK3C2GO75747 1445 aa18.77■□□□□ 0.59
PSMC4-206ENST00000601697 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
PSMC4-206ENST00000601697 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
PSMC4-206ENST00000601697 CLTCQ00610 1675 aaKnown RBP18.75■□□□□ 0.59
PSMC4-206ENST00000601697 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
PSMC4-206ENST00000601697 PREX1Q8TCU6 1659 aa18.74■□□□□ 0.59
PSMC4-206ENST00000601697 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
PSMC4-206ENST00000601697 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
PSMC4-206ENST00000601697 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
PSMC4-206ENST00000601697 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
PSMC4-206ENST00000601697 KDM5AP29375 1690 aaKnown RBP18.72■□□□□ 0.59
PSMC4-206ENST00000601697 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
PSMC4-206ENST00000601697 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
PSMC4-206ENST00000601697 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
PSMC4-206ENST00000601697 MSH5O43196 834 aa18.71■□□□□ 0.58
PSMC4-206ENST00000601697 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.58
PSMC4-206ENST00000601697 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.58
PSMC4-206ENST00000601697 FER1L4A9Z1Z3 1794 aa18.69■□□□□ 0.58
PSMC4-206ENST00000601697 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
PSMC4-206ENST00000601697 IDI1Q13907 227 aa18.69■□□□□ 0.58
PSMC4-206ENST00000601697 ASXL1Q8IXJ9 1541 aa18.69■□□□□ 0.58
PSMC4-206ENST00000601697 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
PSMC4-206ENST00000601697 MYOM1P52179 1685 aa18.68■□□□□ 0.58
PSMC4-206ENST00000601697 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
PSMC4-206ENST00000601697 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
PSMC4-206ENST00000601697 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
PSMC4-206ENST00000601697 ZMYM3Q14202 1370 aa18.66■□□□□ 0.58
PSMC4-206ENST00000601697 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
PSMC4-206ENST00000601697 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
PSMC4-206ENST00000601697 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
PSMC4-206ENST00000601697 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
PSMC4-206ENST00000601697 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
PSMC4-206ENST00000601697 C3P01024 1663 aa18.63■□□□□ 0.57
PSMC4-206ENST00000601697 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
PSMC4-206ENST00000601697 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
PSMC4-206ENST00000601697 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
PSMC4-206ENST00000601697 RIMS1Q86UR5 1692 aaKnown RBP18.62■□□□□ 0.57
PSMC4-206ENST00000601697 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
PSMC4-206ENST00000601697 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
PSMC4-206ENST00000601697 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
PSMC4-206ENST00000601697 TRAK1Q9UPV9 953 aa18.6■□□□□ 0.57
PSMC4-206ENST00000601697 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
PSMC4-206ENST00000601697 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
PSMC4-206ENST00000601697 EXOC6Q8TAG9 804 aa18.59■□□□□ 0.57
PSMC4-206ENST00000601697 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
PSMC4-206ENST00000601697 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
PSMC4-206ENST00000601697 TCERG1O14776 1098 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms