RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 JCADQ9P266 1359 aa25.33■■□□□ 1.65
SSBP4-211ENST00000601614 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
SSBP4-211ENST00000601614 LRP6O75581 1613 aa25.33■■□□□ 1.65
SSBP4-211ENST00000601614 ZFYVE9O95405 1425 aa25.31■■□□□ 1.64
SSBP4-211ENST00000601614 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
SSBP4-211ENST00000601614 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
SSBP4-211ENST00000601614 CHIC2Q9UKJ5 165 aa25.3■■□□□ 1.64
SSBP4-211ENST00000601614 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
SSBP4-211ENST00000601614 BCANQ96GW7 911 aa25.27■■□□□ 1.64
SSBP4-211ENST00000601614 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
SSBP4-211ENST00000601614 PLEKHG1Q9ULL1 1385 aa25.26■■□□□ 1.63
SSBP4-211ENST00000601614 TMEM131LA2VDJ0 1609 aa25.26■■□□□ 1.63
SSBP4-211ENST00000601614 SLC52A1Q9NWF4 448 aa25.25■■□□□ 1.63
SSBP4-211ENST00000601614 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-211ENST00000601614 RIMS2Q9UQ26 1411 aa25.23■■□□□ 1.63
SSBP4-211ENST00000601614 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
SSBP4-211ENST00000601614 UPF1Q92900 1129 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSBP4-211ENST00000601614 AHDC1Q5TGY3 1603 aaPredicted RBP25.21■■□□□ 1.63
SSBP4-211ENST00000601614 RPRD2Q5VT52 1461 aaKnown RBP25.21■■□□□ 1.63
SSBP4-211ENST00000601614 ADGRL2O95490 1459 aa25.2■■□□□ 1.62
SSBP4-211ENST00000601614 SPATA31A6Q5VVP1 1343 aa25.18■■□□□ 1.62
SSBP4-211ENST00000601614 ADAMTS13Q76LX8 1427 aa25.18■■□□□ 1.62
SSBP4-211ENST00000601614 TRIM52Q96A61 297 aa25.17■■□□□ 1.62
SSBP4-211ENST00000601614 NCOA3Q9Y6Q9 1424 aa25.17■■□□□ 1.62
SSBP4-211ENST00000601614 TBX22Q9Y458 520 aa25.16■■□□□ 1.62
SSBP4-211ENST00000601614 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
SSBP4-211ENST00000601614 PPP1R15AO75807 674 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-211ENST00000601614 MEX3CQ5U5Q3 659 aaKnown RBP25.13■■□□□ 1.61
SSBP4-211ENST00000601614 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
SSBP4-211ENST00000601614 ANKRD50Q9ULJ7 1429 aa25.12■■□□□ 1.61
SSBP4-211ENST00000601614 NUTM2DQ5VT03 806 aaPredicted RBP25.12■■□□□ 1.61
SSBP4-211ENST00000601614 E9PCH4 1651 aa25.11■■□□□ 1.61
SSBP4-211ENST00000601614 C14orf37Q86TY3 774 aa25.11■■□□□ 1.61
SSBP4-211ENST00000601614 CADPS2Q86UW7 1296 aa25.09■■□□□ 1.61
SSBP4-211ENST00000601614 C19orf44Q9H6X5 657 aa25.09■■□□□ 1.61
SSBP4-211ENST00000601614 UNC13BO14795 1591 aa25.09■■□□□ 1.61
SSBP4-211ENST00000601614 PTPRUQ92729 1446 aa25.08■■□□□ 1.61
SSBP4-211ENST00000601614 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
SSBP4-211ENST00000601614 CHGAP10645 457 aaKnown RBP25.06■■□□□ 1.6
SSBP4-211ENST00000601614 ATF3P18847 181 aa25.06■■□□□ 1.6
SSBP4-211ENST00000601614 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
SSBP4-211ENST00000601614 PIK3R4Q99570 1358 aa25.05■■□□□ 1.6
SSBP4-211ENST00000601614 APLP2Q06481 763 aa25.05■■□□□ 1.6
SSBP4-211ENST00000601614 CDK12Q9NYV4 1490 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-211ENST00000601614 TRPM2O94759 1503 aa25.04■■□□□ 1.6
SSBP4-211ENST00000601614 RXRBP28702 533 aa25.04■■□□□ 1.6
SSBP4-211ENST00000601614 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.04■■□□□ 1.6
SSBP4-211ENST00000601614 NUTM2BA6NNL0 878 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-211ENST00000601614 NUTM2EB1AL46 878 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-211ENST00000601614 NUTM2AQ8IVF1 878 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-211ENST00000601614 NHSL1Q5SYE7 1610 aa25.03■■□□□ 1.6
SSBP4-211ENST00000601614 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
SSBP4-211ENST00000601614 NRXN3Q9Y4C0 1643 aa25.02■■□□□ 1.6
SSBP4-211ENST00000601614 XRN1Q8IZH2 1706 aaKnown RBP25.02■■□□□ 1.6
SSBP4-211ENST00000601614 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
SSBP4-211ENST00000601614 AMOTL2Q9Y2J4 779 aa25■■□□□ 1.59
SSBP4-211ENST00000601614 AFF2P51816 1311 aa24.99■■□□□ 1.59
SSBP4-211ENST00000601614 IQGAP3Q86VI3 1631 aa24.98■■□□□ 1.59
SSBP4-211ENST00000601614 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
SSBP4-211ENST00000601614 DCCP43146 1447 aa24.97■■□□□ 1.59
SSBP4-211ENST00000601614 MST1RQ04912 1400 aa24.97■■□□□ 1.59
SSBP4-211ENST00000601614 RGS12O14924 1447 aa24.96■■□□□ 1.59
SSBP4-211ENST00000601614 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
SSBP4-211ENST00000601614 DDX17Q92841 729 aaKnown RBP24.92■■□□□ 1.58
SSBP4-211ENST00000601614 NALCNQ8IZF0 1738 aa24.9■■□□□ 1.58
SSBP4-211ENST00000601614 PNPLA6Q8IY17 1366 aa24.89■■□□□ 1.57
SSBP4-211ENST00000601614 C8orf37Q96NL8 207 aa24.88■■□□□ 1.57
SSBP4-211ENST00000601614 METP08581 1390 aa24.87■■□□□ 1.57
SSBP4-211ENST00000601614 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
SSBP4-211ENST00000601614 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
SSBP4-211ENST00000601614 SPHKAPQ2M3C7 1700 aa24.86■■□□□ 1.57
SSBP4-211ENST00000601614 ADGRL3Q9HAR2 1447 aa24.85■■□□□ 1.57
SSBP4-211ENST00000601614 RBM6P78332 1123 aaKnown RBP24.84■■□□□ 1.57
SSBP4-211ENST00000601614 NUP155O75694 1391 aa24.82■■□□□ 1.56
SSBP4-211ENST00000601614 ROCK1Q13464 1354 aa24.81■■□□□ 1.56
SSBP4-211ENST00000601614 LAMC1P11047 1609 aa24.81■■□□□ 1.56
SSBP4-211ENST00000601614 SRCAPQ6ZRS2 3230 aa24.78■■□□□ 1.56
SSBP4-211ENST00000601614 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
SSBP4-211ENST00000601614 ADAMTS2O95450 1211 aa24.77■■□□□ 1.56
SSBP4-211ENST00000601614 C1orf167Q5SNV9 1468 aa24.76■■□□□ 1.55
SSBP4-211ENST00000601614 CLTCL1P53675 1640 aa24.75■■□□□ 1.55
SSBP4-211ENST00000601614 NGLY1Q96IV0 654 aa24.74■■□□□ 1.55
SSBP4-211ENST00000601614 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
SSBP4-211ENST00000601614 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
SSBP4-211ENST00000601614 SOS2Q07890 1332 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-211ENST00000601614 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
SSBP4-211ENST00000601614 COL22A1Q8NFW1 1626 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-211ENST00000601614 USP21Q9UK80 565 aa24.68■■□□□ 1.54
SSBP4-211ENST00000601614 KIF1BO60333 1816 aa24.68■■□□□ 1.54
SSBP4-211ENST00000601614 ATRNO75882 1429 aa24.67■■□□□ 1.54
SSBP4-211ENST00000601614 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
SSBP4-211ENST00000601614 ROBO2Q9HCK4 1378 aa24.66■■□□□ 1.54
SSBP4-211ENST00000601614 ITGAEP38570 1179 aa24.65■■□□□ 1.54
SSBP4-211ENST00000601614 FNBP4Q8N3X1 1017 aaPredicted RBP24.65■■□□□ 1.54
SSBP4-211ENST00000601614 MARF1Q9Y4F3 1742 aaKnown RBP24.65■■□□□ 1.54
SSBP4-211ENST00000601614 TRPC5Q9UL62 973 aaPredicted RBP24.64■■□□□ 1.54
SSBP4-211ENST00000601614 EP400Q96L91 3159 aa24.63■■□□□ 1.53
SSBP4-211ENST00000601614 MYOM2P54296 1465 aa24.61■■□□□ 1.53
SSBP4-211ENST00000601614 BCL9LQ86UU0 1499 aa24.59■■□□□ 1.53
SSBP4-211ENST00000601614 PRAG1Q86YV5 1406 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms