RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 TATDN2Q93075 761 aa13.89□□□□□ -0.19
LINC00343-209ENST00000601607 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
LINC00343-209ENST00000601607 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
LINC00343-209ENST00000601607 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
LINC00343-209ENST00000601607 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
LINC00343-209ENST00000601607 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
LINC00343-209ENST00000601607 NUDT18Q6ZVK8 323 aa13.87□□□□□ -0.19
LINC00343-209ENST00000601607 FECHP22830 423 aa13.86□□□□□ -0.19
LINC00343-209ENST00000601607 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
LINC00343-209ENST00000601607 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
LINC00343-209ENST00000601607 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
LINC00343-209ENST00000601607 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
LINC00343-209ENST00000601607 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
LINC00343-209ENST00000601607 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
LINC00343-209ENST00000601607 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
LINC00343-209ENST00000601607 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
LINC00343-209ENST00000601607 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
LINC00343-209ENST00000601607 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
LINC00343-209ENST00000601607 EYA1Q99502 592 aa13.79□□□□□ -0.2
LINC00343-209ENST00000601607 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
LINC00343-209ENST00000601607 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
LINC00343-209ENST00000601607 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
LINC00343-209ENST00000601607 WDR62O43379 1518 aa13.76□□□□□ -0.21
LINC00343-209ENST00000601607 KCNC4Q03721 635 aa13.76□□□□□ -0.21
LINC00343-209ENST00000601607 OATP04181 439 aa13.75□□□□□ -0.21
LINC00343-209ENST00000601607 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
LINC00343-209ENST00000601607 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
LINC00343-209ENST00000601607 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
LINC00343-209ENST00000601607 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
LINC00343-209ENST00000601607 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
LINC00343-209ENST00000601607 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
LINC00343-209ENST00000601607 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
LINC00343-209ENST00000601607 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
LINC00343-209ENST00000601607 RCCD1A6NED2 376 aa13.7□□□□□ -0.22
LINC00343-209ENST00000601607 ZMYND10O75800 440 aa13.7□□□□□ -0.22
LINC00343-209ENST00000601607 DNAJB2P25686 324 aa13.7□□□□□ -0.22
LINC00343-209ENST00000601607 PPP4CP60510 307 aa13.7□□□□□ -0.22
LINC00343-209ENST00000601607 IRF6O14896 467 aa13.69□□□□□ -0.22
LINC00343-209ENST00000601607 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
LINC00343-209ENST00000601607 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
LINC00343-209ENST00000601607 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
LINC00343-209ENST00000601607 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
LINC00343-209ENST00000601607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
LINC00343-209ENST00000601607 RNF40O75150 1001 aa13.66□□□□□ -0.22
LINC00343-209ENST00000601607 TMEM134Q9H6X4 195 aa13.66□□□□□ -0.22
LINC00343-209ENST00000601607 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
LINC00343-209ENST00000601607 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
LINC00343-209ENST00000601607 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
LINC00343-209ENST00000601607 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
LINC00343-209ENST00000601607 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
LINC00343-209ENST00000601607 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
LINC00343-209ENST00000601607 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
LINC00343-209ENST00000601607 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
LINC00343-209ENST00000601607 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
LINC00343-209ENST00000601607 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
LINC00343-209ENST00000601607 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
LINC00343-209ENST00000601607 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
LINC00343-209ENST00000601607 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
LINC00343-209ENST00000601607 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
LINC00343-209ENST00000601607 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-209ENST00000601607 TJAP1Q5JTD0 557 aa13.54□□□□□ -0.24
LINC00343-209ENST00000601607 IL21Q9HBE4 155 aa13.54□□□□□ -0.24
LINC00343-209ENST00000601607 MDM2Q00987 491 aaPredicted RBP13.53□□□□□ -0.24
LINC00343-209ENST00000601607 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.25
LINC00343-209ENST00000601607 AK7Q96M32 723 aa13.51□□□□□ -0.25
LINC00343-209ENST00000601607 MTRQ99707 1265 aa13.51□□□□□ -0.25
LINC00343-209ENST00000601607 SLC10A3P09131 477 aa13.5□□□□□ -0.25
LINC00343-209ENST00000601607 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
LINC00343-209ENST00000601607 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
LINC00343-209ENST00000601607 APLP1P51693 650 aa13.48□□□□□ -0.25
LINC00343-209ENST00000601607 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
LINC00343-209ENST00000601607 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
LINC00343-209ENST00000601607 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
LINC00343-209ENST00000601607 TRIM66O15016 1216 aa13.46□□□□□ -0.25
LINC00343-209ENST00000601607 CFHP08603 1231 aa13.46□□□□□ -0.25
LINC00343-209ENST00000601607 CLCN1P35523 988 aa13.46□□□□□ -0.25
LINC00343-209ENST00000601607 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
LINC00343-209ENST00000601607 PRR14Q9BWN1 585 aa13.45□□□□□ -0.26
LINC00343-209ENST00000601607 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
LINC00343-209ENST00000601607 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-209ENST00000601607 CFTRP13569 1480 aa13.44□□□□□ -0.26
LINC00343-209ENST00000601607 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
LINC00343-209ENST00000601607 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-209ENST00000601607 AMHR2Q16671 573 aa13.44□□□□□ -0.26
LINC00343-209ENST00000601607 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
LINC00343-209ENST00000601607 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
LINC00343-209ENST00000601607 Q6ZNB5 142 aa13.42□□□□□ -0.26
LINC00343-209ENST00000601607 REPIN1Q9BWE0 567 aaKnown RBP13.42□□□□□ -0.26
LINC00343-209ENST00000601607 TMUB1Q9BVT8 246 aa13.41□□□□□ -0.26
LINC00343-209ENST00000601607 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
LINC00343-209ENST00000601607 GGCXP38435 758 aa13.39□□□□□ -0.27
LINC00343-209ENST00000601607 ACTN4O43707 911 aaKnown RBP13.38□□□□□ -0.27
LINC00343-209ENST00000601607 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
LINC00343-209ENST00000601607 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
LINC00343-209ENST00000601607 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
LINC00343-209ENST00000601607 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
LINC00343-209ENST00000601607 IFT140Q96RY7 1462 aa13.37□□□□□ -0.27
LINC00343-209ENST00000601607 CD46P15529 392 aa13.37□□□□□ -0.27
LINC00343-209ENST00000601607 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
LINC00343-209ENST00000601607 PRKD2Q9BZL6 878 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms