RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 TMEM131LA2VDJ0 1609 aa17.81■□□□□ 0.44
SYMPK-216ENST00000601582 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
SYMPK-216ENST00000601582 BCANQ96GW7 911 aa17.8■□□□□ 0.44
SYMPK-216ENST00000601582 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
SYMPK-216ENST00000601582 KCNA6P17658 529 aa17.79■□□□□ 0.44
SYMPK-216ENST00000601582 ZFYVE9O95405 1425 aa17.79■□□□□ 0.44
SYMPK-216ENST00000601582 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
SYMPK-216ENST00000601582 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
SYMPK-216ENST00000601582 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
SYMPK-216ENST00000601582 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-216ENST00000601582 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
SYMPK-216ENST00000601582 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
SYMPK-216ENST00000601582 TMEM94Q12767 1356 aa17.75■□□□□ 0.43
SYMPK-216ENST00000601582 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
SYMPK-216ENST00000601582 NAIPQ13075 1403 aa17.72■□□□□ 0.43
SYMPK-216ENST00000601582 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYMPK-216ENST00000601582 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
SYMPK-216ENST00000601582 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
SYMPK-216ENST00000601582 TBX22Q9Y458 520 aa17.7■□□□□ 0.42
SYMPK-216ENST00000601582 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
SYMPK-216ENST00000601582 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
SYMPK-216ENST00000601582 ADAMTS13Q76LX8 1427 aa17.68■□□□□ 0.42
SYMPK-216ENST00000601582 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
SYMPK-216ENST00000601582 SOCS7O14512 581 aa17.65■□□□□ 0.42
SYMPK-216ENST00000601582 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
SYMPK-216ENST00000601582 FAM135BQ49AJ0 1406 aa17.64■□□□□ 0.42
SYMPK-216ENST00000601582 ZNF326Q5BKZ1 582 aaKnown RBP17.64■□□□□ 0.41
SYMPK-216ENST00000601582 HFM1A2PYH4 1435 aa17.64■□□□□ 0.41
SYMPK-216ENST00000601582 MSH6P52701 1360 aa17.63■□□□□ 0.41
SYMPK-216ENST00000601582 CLTCL1P53675 1640 aa17.62■□□□□ 0.41
SYMPK-216ENST00000601582 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
SYMPK-216ENST00000601582 DIP2AQ14689 1571 aa17.61■□□□□ 0.41
SYMPK-216ENST00000601582 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
SYMPK-216ENST00000601582 AMOTL2Q9Y2J4 779 aa17.6■□□□□ 0.41
SYMPK-216ENST00000601582 PIK3R4Q99570 1358 aa17.6■□□□□ 0.41
SYMPK-216ENST00000601582 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
SYMPK-216ENST00000601582 TRPM2O94759 1503 aa17.6■□□□□ 0.41
SYMPK-216ENST00000601582 NRXN3Q9Y4C0 1643 aa17.59■□□□□ 0.41
SYMPK-216ENST00000601582 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
SYMPK-216ENST00000601582 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
SYMPK-216ENST00000601582 KIF1BO60333 1816 aa17.58■□□□□ 0.4
SYMPK-216ENST00000601582 NCOA3Q9Y6Q9 1424 aa17.56■□□□□ 0.4
SYMPK-216ENST00000601582 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
SYMPK-216ENST00000601582 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
SYMPK-216ENST00000601582 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
SYMPK-216ENST00000601582 FOXD1Q16676 465 aa17.55■□□□□ 0.4
SYMPK-216ENST00000601582 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.55■□□□□ 0.4
SYMPK-216ENST00000601582 METP08581 1390 aa17.54■□□□□ 0.4
SYMPK-216ENST00000601582 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
SYMPK-216ENST00000601582 ATF3P18847 181 aa17.51■□□□□ 0.39
SYMPK-216ENST00000601582 CADPS2Q86UW7 1296 aa17.51■□□□□ 0.39
SYMPK-216ENST00000601582 XRN1Q8IZH2 1706 aaKnown RBP17.51■□□□□ 0.39
SYMPK-216ENST00000601582 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
SYMPK-216ENST00000601582 RGS17Q9UGC6 210 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-216ENST00000601582 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
SYMPK-216ENST00000601582 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
SYMPK-216ENST00000601582 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
SYMPK-216ENST00000601582 PPLO60437 1756 aa17.45■□□□□ 0.38
SYMPK-216ENST00000601582 COL16A1Q07092 1604 aaPredicted RBP17.44■□□□□ 0.38
SYMPK-216ENST00000601582 BRINP3Q76B58 766 aa17.44■□□□□ 0.38
SYMPK-216ENST00000601582 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
SYMPK-216ENST00000601582 JCADQ9P266 1359 aa17.43■□□□□ 0.38
SYMPK-216ENST00000601582 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
SYMPK-216ENST00000601582 DCCP43146 1447 aa17.42■□□□□ 0.38
SYMPK-216ENST00000601582 CCDC144AA2RUR9 1427 aa17.41■□□□□ 0.38
SYMPK-216ENST00000601582 AHDC1Q5TGY3 1603 aaPredicted RBP17.4■□□□□ 0.38
SYMPK-216ENST00000601582 MST1RQ04912 1400 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
SYMPK-216ENST00000601582 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
SYMPK-216ENST00000601582 SPATA31E1Q6ZUB1 1445 aa17.38■□□□□ 0.37
SYMPK-216ENST00000601582 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
SYMPK-216ENST00000601582 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
SYMPK-216ENST00000601582 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
SYMPK-216ENST00000601582 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
SYMPK-216ENST00000601582 LRP6O75581 1613 aa17.35■□□□□ 0.37
SYMPK-216ENST00000601582 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
SYMPK-216ENST00000601582 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
SYMPK-216ENST00000601582 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
SYMPK-216ENST00000601582 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
SYMPK-216ENST00000601582 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
SYMPK-216ENST00000601582 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
SYMPK-216ENST00000601582 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
SYMPK-216ENST00000601582 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
SYMPK-216ENST00000601582 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
SYMPK-216ENST00000601582 STK26Q9P289 416 aa17.32■□□□□ 0.36
SYMPK-216ENST00000601582 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-216ENST00000601582 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-216ENST00000601582 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-216ENST00000601582 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
SYMPK-216ENST00000601582 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
SYMPK-216ENST00000601582 LRRC59Q96AG4 307 aaKnown RBP17.3■□□□□ 0.36
SYMPK-216ENST00000601582 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
SYMPK-216ENST00000601582 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
SYMPK-216ENST00000601582 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.35
SYMPK-216ENST00000601582 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
SYMPK-216ENST00000601582 TECPR2O15040 1411 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms