RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
CCDC9-206ENST00000601154 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
CCDC9-206ENST00000601154 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
CCDC9-206ENST00000601154 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
CCDC9-206ENST00000601154 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
CCDC9-206ENST00000601154 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
CCDC9-206ENST00000601154 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
CCDC9-206ENST00000601154 MSH6P52701 1360 aa12.87□□□□□ -0.35
CCDC9-206ENST00000601154 NUTM2DQ5VT03 806 aaPredicted RBP12.87□□□□□ -0.35
CCDC9-206ENST00000601154 ZFYVE9O95405 1425 aa12.87□□□□□ -0.35
CCDC9-206ENST00000601154 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
CCDC9-206ENST00000601154 GCC2Q8IWJ2 1684 aa12.84□□□□□ -0.35
CCDC9-206ENST00000601154 ITGAEP38570 1179 aa12.84□□□□□ -0.35
CCDC9-206ENST00000601154 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
CCDC9-206ENST00000601154 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
CCDC9-206ENST00000601154 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
CCDC9-206ENST00000601154 UNC13BO14795 1591 aa12.82□□□□□ -0.36
CCDC9-206ENST00000601154 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
CCDC9-206ENST00000601154 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
CCDC9-206ENST00000601154 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
CCDC9-206ENST00000601154 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
CCDC9-206ENST00000601154 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC9-206ENST00000601154 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
CCDC9-206ENST00000601154 NUP155O75694 1391 aa12.8□□□□□ -0.36
CCDC9-206ENST00000601154 E9PCH4 1651 aa12.8□□□□□ -0.36
CCDC9-206ENST00000601154 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CCDC9-206ENST00000601154 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
CCDC9-206ENST00000601154 JCADQ9P266 1359 aa12.79□□□□□ -0.36
CCDC9-206ENST00000601154 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
CCDC9-206ENST00000601154 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.36
CCDC9-206ENST00000601154 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
CCDC9-206ENST00000601154 ATF3P18847 181 aa12.76□□□□□ -0.37
CCDC9-206ENST00000601154 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
CCDC9-206ENST00000601154 DIP2AQ14689 1571 aa12.75□□□□□ -0.37
CCDC9-206ENST00000601154 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
CCDC9-206ENST00000601154 LRP6O75581 1613 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 TRPM2O94759 1503 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
CCDC9-206ENST00000601154 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
CCDC9-206ENST00000601154 PIK3R4Q99570 1358 aa12.73□□□□□ -0.37
CCDC9-206ENST00000601154 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
CCDC9-206ENST00000601154 SETD1AO15047 1707 aaKnown RBP12.72□□□□□ -0.37
CCDC9-206ENST00000601154 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
CCDC9-206ENST00000601154 SPATA31A6Q5VVP1 1343 aa12.71□□□□□ -0.37
CCDC9-206ENST00000601154 BRINP3Q76B58 766 aa12.71□□□□□ -0.37
CCDC9-206ENST00000601154 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-206ENST00000601154 NUTM2BA6NNL0 878 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-206ENST00000601154 NUTM2EB1AL46 878 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-206ENST00000601154 NUTM2AQ8IVF1 878 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-206ENST00000601154 TRIM52Q96A61 297 aa12.69□□□□□ -0.38
CCDC9-206ENST00000601154 NRXN3Q9Y4C0 1643 aa12.69□□□□□ -0.38
CCDC9-206ENST00000601154 METP08581 1390 aa12.69□□□□□ -0.38
CCDC9-206ENST00000601154 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
CCDC9-206ENST00000601154 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
CCDC9-206ENST00000601154 SPHKAPQ2M3C7 1700 aa12.67□□□□□ -0.38
CCDC9-206ENST00000601154 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
CCDC9-206ENST00000601154 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
CCDC9-206ENST00000601154 DCCP43146 1447 aa12.66□□□□□ -0.38
CCDC9-206ENST00000601154 MST1RQ04912 1400 aa12.66□□□□□ -0.38
CCDC9-206ENST00000601154 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
CCDC9-206ENST00000601154 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
CCDC9-206ENST00000601154 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
CCDC9-206ENST00000601154 NEXMIFQ5QGS0 1516 aa12.64□□□□□ -0.39
CCDC9-206ENST00000601154 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
CCDC9-206ENST00000601154 AFF2P51816 1311 aa12.62□□□□□ -0.39
CCDC9-206ENST00000601154 RXRBP28702 533 aa12.62□□□□□ -0.39
CCDC9-206ENST00000601154 NAIPQ13075 1403 aa12.62□□□□□ -0.39
CCDC9-206ENST00000601154 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
CCDC9-206ENST00000601154 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC9-206ENST00000601154 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
CCDC9-206ENST00000601154 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
CCDC9-206ENST00000601154 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
CCDC9-206ENST00000601154 NALCNQ8IZF0 1738 aa12.59□□□□□ -0.39
CCDC9-206ENST00000601154 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
CCDC9-206ENST00000601154 PNPLA6Q8IY17 1366 aa12.59□□□□□ -0.39
CCDC9-206ENST00000601154 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
CCDC9-206ENST00000601154 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
CCDC9-206ENST00000601154 C1orf167Q5SNV9 1468 aa12.58□□□□□ -0.4
CCDC9-206ENST00000601154 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CCDC9-206ENST00000601154 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
CCDC9-206ENST00000601154 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
CCDC9-206ENST00000601154 ORAI2Q96SN7 254 aa12.56□□□□□ -0.4
CCDC9-206ENST00000601154 RGS12O14924 1447 aa12.55□□□□□ -0.4
CCDC9-206ENST00000601154 FOXD1Q16676 465 aa12.55□□□□□ -0.4
CCDC9-206ENST00000601154 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
CCDC9-206ENST00000601154 KIF1BO60333 1816 aa12.55□□□□□ -0.4
CCDC9-206ENST00000601154 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
CCDC9-206ENST00000601154 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
CCDC9-206ENST00000601154 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
CCDC9-206ENST00000601154 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
CCDC9-206ENST00000601154 RPGRIP1LQ68CZ1 1315 aa12.52□□□□□ -0.41
CCDC9-206ENST00000601154 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
CCDC9-206ENST00000601154 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
CCDC9-206ENST00000601154 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
CCDC9-206ENST00000601154 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
CCDC9-206ENST00000601154 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
CCDC9-206ENST00000601154 STK26Q9P289 416 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms