RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-227	ENST00000600911	STAG3	Q9UJ98	1225 aa		33.03	■■■□□ 2.88
IRF3-227	ENST00000600911	ZFYVE9	O95405	1425 aa		33	■■■□□ 2.87
IRF3-227	ENST00000600911	UHRF1BP1	Q6BDS2	1440 aa		32.98	■■■□□ 2.87
IRF3-227	ENST00000600911	ADGRF5	Q8IZF2	1346 aa		32.98	■■■□□ 2.87
IRF3-227	ENST00000600911	MYOM2	P54296	1465 aa		32.98	■■■□□ 2.87
IRF3-227	ENST00000600911	PRAG1	Q86YV5	1406 aa		32.97	■■■□□ 2.87
IRF3-227	ENST00000600911	RIMS2	Q9UQ26	1411 aa		32.97	■■■□□ 2.87
IRF3-227	ENST00000600911	TMEM2	Q9UHN6	1383 aa		32.94	■■■□□ 2.86
IRF3-227	ENST00000600911	NRXN1	Q9ULB1	1477 aa		32.94	■■■□□ 2.86
IRF3-227	ENST00000600911	ARHGAP23	Q9P227	1491 aa		32.93	■■■□□ 2.86
IRF3-227	ENST00000600911	RPGRIP1L	Q68CZ1	1315 aa		32.93	■■■□□ 2.86
IRF3-227	ENST00000600911	SLIT1	O75093	1534 aa		32.93	■■■□□ 2.86
IRF3-227	ENST00000600911	SENP3	Q9H4L4	574 aa	Predicted RBP	32.92	■■■□□ 2.86
IRF3-227	ENST00000600911	TRPM1	Q7Z4N2	1603 aa		32.91	■■■□□ 2.86
IRF3-227	ENST00000600911	LTK	P29376	864 aa		32.88	■■■□□ 2.85
IRF3-227	ENST00000600911	LMTK3	Q96Q04	1460 aa		32.87	■■■□□ 2.85
IRF3-227	ENST00000600911	PIK3C2G	O75747	1445 aa		32.86	■■■□□ 2.85
IRF3-227	ENST00000600911	NRXN3	Q9Y4C0	1643 aa		32.86	■■■□□ 2.85
IRF3-227	ENST00000600911	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.85	■■■□□ 2.85
IRF3-227	ENST00000600911	IQGAP1	P46940	1657 aa		32.83	■■■□□ 2.85
IRF3-227	ENST00000600911	RALGAPB	Q86X10	1494 aa		32.81	■■■□□ 2.84
IRF3-227	ENST00000600911	VGF	O15240	615 aa	Predicted RBP	32.8	■■■□□ 2.84
IRF3-227	ENST00000600911	NBPF1	Q3BBV0	1214 aa		32.8	■■■□□ 2.84
IRF3-227	ENST00000600911	SETD1A	O15047	1707 aa	Known RBP	32.8	■■■□□ 2.84
IRF3-227	ENST00000600911	KIAA1210	Q9ULL0	1709 aa		32.78	■■■□□ 2.84
IRF3-227	ENST00000600911	HSPA2	P54652	639 aa		32.78	■■■□□ 2.84
IRF3-227	ENST00000600911	CFAP70	Q5T0N1	1121 aa		32.78	■■■□□ 2.84
IRF3-227	ENST00000600911	TXNDC2	Q86VQ3	553 aa		32.78	■■■□□ 2.84
IRF3-227	ENST00000600911	STAC3	Q96MF2	364 aa		32.77	■■■□□ 2.84
IRF3-227	ENST00000600911	POLR1A	O95602	1720 aa	Predicted RBP	32.77	■■■□□ 2.84
IRF3-227	ENST00000600911	SCAF11	Q99590	1463 aa	Known RBP	32.77	■■■□□ 2.84
IRF3-227	ENST00000600911	ASXL1	Q8IXJ9	1541 aa		32.75	■■■□□ 2.83
IRF3-227	ENST00000600911	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
IRF3-227	ENST00000600911	ALK	Q9UM73	1620 aa		32.74	■■■□□ 2.83
IRF3-227	ENST00000600911	SETBP1	Q9Y6X0	1596 aa		32.74	■■■□□ 2.83
IRF3-227	ENST00000600911	PLEKHG1	Q9ULL1	1385 aa		32.71	■■■□□ 2.83
IRF3-227	ENST00000600911	C14orf93	Q9H972	538 aa	Known RBP	32.7	■■■□□ 2.83
IRF3-227	ENST00000600911	ADGRB1	O14514	1584 aa		32.7	■■■□□ 2.83
IRF3-227	ENST00000600911	LAMC1	P11047	1609 aa		32.7	■■■□□ 2.82
IRF3-227	ENST00000600911	ADAMTS13	Q76LX8	1427 aa		32.69	■■■□□ 2.82
IRF3-227	ENST00000600911	EID1	Q9Y6B2	187 aa		32.69	■■■□□ 2.82
IRF3-227	ENST00000600911	NCKAP5L	Q9HCH0	1330 aa		32.68	■■■□□ 2.82
IRF3-227	ENST00000600911	ROCK2	O75116	1388 aa	Known RBP	32.67	■■■□□ 2.82
IRF3-227	ENST00000600911	GPRASP1	Q5JY77	1395 aa		32.67	■■■□□ 2.82
IRF3-227	ENST00000600911	STRC	Q7RTU9	1775 aa		32.67	■■■□□ 2.82
IRF3-227	ENST00000600911	HDGF	P51858	240 aa	Known RBP	32.66	■■■□□ 2.82
IRF3-227	ENST00000600911	TMEM132E	Q6IEE7	984 aa		32.65	■■■□□ 2.82
IRF3-227	ENST00000600911	ANKLE2	Q86XL3	938 aa		32.65	■■■□□ 2.82
IRF3-227	ENST00000600911	MED14	O60244	1454 aa		32.64	■■■□□ 2.82
IRF3-227	ENST00000600911	SLC26A8	Q96RN1	970 aa		32.6	■■■□□ 2.81
IRF3-227	ENST00000600911	CARD11	Q9BXL7	1154 aa		32.6	■■■□□ 2.81
IRF3-227	ENST00000600911	MET	P08581	1390 aa		32.59	■■■□□ 2.81
IRF3-227	ENST00000600911	NPHP4	O75161	1426 aa	Predicted RBP	32.58	■■■□□ 2.81
IRF3-227	ENST00000600911	BCAN	Q96GW7	911 aa		32.58	■■■□□ 2.81
IRF3-227	ENST00000600911	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.56	■■■□□ 2.8
IRF3-227	ENST00000600911	USP47	Q96K76	1375 aa		32.52	■■■□□ 2.8
IRF3-227	ENST00000600911	DIP2A	Q14689	1571 aa		32.52	■■■□□ 2.8
IRF3-227	ENST00000600911	PTPRU	Q92729	1446 aa		32.52	■■■□□ 2.8
IRF3-227	ENST00000600911	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.51	■■■□□ 2.8
IRF3-227	ENST00000600911	HSPA5	P11021	654 aa	Known RBP	32.51	■■■□□ 2.79
IRF3-227	ENST00000600911	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.49	■■■□□ 2.79
IRF3-227	ENST00000600911	TBX22	Q9Y458	520 aa		32.47	■■■□□ 2.79
IRF3-227	ENST00000600911	STK26	Q9P289	416 aa		32.46	■■■□□ 2.79
IRF3-227	ENST00000600911	TRAK1	Q9UPV9	953 aa		32.46	■■■□□ 2.79
IRF3-227	ENST00000600911	KNDC1	Q76NI1	1749 aa		32.44	■■■□□ 2.78
IRF3-227	ENST00000600911	CHD2	O14647	1828 aa	Known RBP	32.44	■■■□□ 2.78
IRF3-227	ENST00000600911	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.44	■■■□□ 2.78	2e-7	■■■■■ 34.3
IRF3-227	ENST00000600911	LRPPRC	P42704	1394 aa	Known RBP	32.42	■■■□□ 2.78
IRF3-227	ENST00000600911	XRN1	Q8IZH2	1706 aa	Known RBP	32.42	■■■□□ 2.78
IRF3-227	ENST00000600911	ST20-MTHFS	A0A0A6YYL1	179 aa		32.4	■■■□□ 2.78
IRF3-227	ENST00000600911	STRCP1	A6NGW2	1772 aa		32.38	■■■□□ 2.77
IRF3-227	ENST00000600911	CPS1	P31327	1500 aa		32.37	■■■□□ 2.77
IRF3-227	ENST00000600911	QRICH2	Q9H0J4	1663 aa		32.36	■■■□□ 2.77
IRF3-227	ENST00000600911	ABCC11	Q96J66	1382 aa		32.35	■■■□□ 2.77
IRF3-227	ENST00000600911	PLEKHH1	Q9ULM0	1364 aa		32.35	■■■□□ 2.77
IRF3-227	ENST00000600911	DLC1	Q96QB1	1528 aa		32.35	■■■□□ 2.77
IRF3-227	ENST00000600911	TECPR2	O15040	1411 aa		32.35	■■■□□ 2.77
IRF3-227	ENST00000600911	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.33	■■■□□ 2.77
IRF3-227	ENST00000600911	AMOTL2	Q9Y2J4	779 aa		32.33	■■■□□ 2.77
IRF3-227	ENST00000600911	ROBO2	Q9HCK4	1378 aa		32.33	■■■□□ 2.77
IRF3-227	ENST00000600911	TESK2	Q96S53	571 aa		32.32	■■■□□ 2.76
IRF3-227	ENST00000600911	PIK3R4	Q99570	1358 aa		32.32	■■■□□ 2.76
IRF3-227	ENST00000600911	NWD1	Q149M9	1564 aa		32.31	■■■□□ 2.76
IRF3-227	ENST00000600911	C11orf95	C9JLR9	678 aa	Predicted RBP	32.3	■■■□□ 2.76
IRF3-227	ENST00000600911	WAPL	Q7Z5K2	1190 aa		32.3	■■■□□ 2.76
IRF3-227	ENST00000600911	KCNA6	P17658	529 aa		32.29	■■■□□ 2.76
IRF3-227	ENST00000600911	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
IRF3-227	ENST00000600911	PRAM1	Q96QH2	718 aa		32.29	■■■□□ 2.76
IRF3-227	ENST00000600911	EIF3A	Q14152	1382 aa	Known RBP	32.27	■■■□□ 2.76
IRF3-227	ENST00000600911	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.27	■■■□□ 2.76
IRF3-227	ENST00000600911	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.26	■■■□□ 2.76
IRF3-227	ENST00000600911	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.26	■■■□□ 2.75
IRF3-227	ENST00000600911	PTCH1	Q13635	1447 aa		32.24	■■■□□ 2.75
IRF3-227	ENST00000600911	DISP3	Q9P2K9	1392 aa		32.22	■■■□□ 2.75
IRF3-227	ENST00000600911	FAM135B	Q49AJ0	1406 aa		32.22	■■■□□ 2.75
IRF3-227	ENST00000600911	RBM33	Q96EV2	1170 aa	Known RBP	32.19	■■■□□ 2.74
IRF3-227	ENST00000600911	TULP4	Q9NRJ4	1543 aa		32.19	■■■□□ 2.74
IRF3-227	ENST00000600911	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.18	■■■□□ 2.74
IRF3-227	ENST00000600911	SIRT1	Q96EB6	747 aa		32.18	■■■□□ 2.74
IRF3-227	ENST00000600911	POGK	Q9P215	609 aa		32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms