RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 KDM2AQ9Y2K7 1162 aa29.45■■■□□ 2.3
PNKP-215ENST00000600910 RIMS2Q9UQ26 1411 aa29.44■■■□□ 2.3
PNKP-215ENST00000600910 LMTK3Q96Q04 1460 aa29.44■■■□□ 2.3
PNKP-215ENST00000600910 ZFYVE9O95405 1425 aa29.43■■■□□ 2.3
PNKP-215ENST00000600910 SLIT1O75093 1534 aa29.43■■■□□ 2.3
PNKP-215ENST00000600910 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
PNKP-215ENST00000600910 ARHGAP23Q9P227 1491 aa29.41■■■□□ 2.3
PNKP-215ENST00000600910 ZEB1P37275 1124 aaPredicted RBP29.4■■■□□ 2.3
PNKP-215ENST00000600910 MYOM2P54296 1465 aa29.39■■■□□ 2.3
PNKP-215ENST00000600910 STAC3Q96MF2 364 aa29.38■■■□□ 2.29
PNKP-215ENST00000600910 VGFO15240 615 aaPredicted RBP29.37■■■□□ 2.29
PNKP-215ENST00000600910 PPP1R15AO75807 674 aaPredicted RBP29.37■■■□□ 2.29
PNKP-215ENST00000600910 HDGFP51858 240 aaKnown RBP29.37■■■□□ 2.29
PNKP-215ENST00000600910 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.37■■■□□ 2.29
PNKP-215ENST00000600910 ADGRF5Q8IZF2 1346 aa29.36■■■□□ 2.29
PNKP-215ENST00000600910 LTKP29376 864 aa29.35■■■□□ 2.29
PNKP-215ENST00000600910 EID1Q9Y6B2 187 aa29.35■■■□□ 2.29
PNKP-215ENST00000600910 TXNDC2Q86VQ3 553 aa29.34■■■□□ 2.29
PNKP-215ENST00000600910 HSPA2P54652 639 aa29.34■■■□□ 2.29
PNKP-215ENST00000600910 SCAF11Q99590 1463 aaKnown RBP29.32■■■□□ 2.28
PNKP-215ENST00000600910 NRXN1Q9ULB1 1477 aa29.32■■■□□ 2.28
PNKP-215ENST00000600910 PRAG1Q86YV5 1406 aa29.32■■■□□ 2.28
PNKP-215ENST00000600910 ANKLE2Q86XL3 938 aa29.31■■■□□ 2.28
PNKP-215ENST00000600910 NBPF8Q3BBV2 869 aa29.29■■■□□ 2.28
PNKP-215ENST00000600910 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
PNKP-215ENST00000600910 PIK3C2GO75747 1445 aa29.28■■■□□ 2.28
PNKP-215ENST00000600910 AEBP2Q6ZN18 517 aaPredicted RBP29.27■■■□□ 2.28
PNKP-215ENST00000600910 POLR1AO95602 1720 aaPredicted RBP29.26■■■□□ 2.27
PNKP-215ENST00000600910 PLEKHG1Q9ULL1 1385 aa29.25■■■□□ 2.27
PNKP-215ENST00000600910 NCKAP5LQ9HCH0 1330 aa29.23■■■□□ 2.27
PNKP-215ENST00000600910 BCANQ96GW7 911 aa29.21■■■□□ 2.27
PNKP-215ENST00000600910 SETBP1Q9Y6X0 1596 aa29.21■■■□□ 2.27
PNKP-215ENST00000600910 NRXN3Q9Y4C0 1643 aa29.21■■■□□ 2.27
PNKP-215ENST00000600910 IQGAP1P46940 1657 aa29.2■■■□□ 2.26
PNKP-215ENST00000600910 TRPM1Q7Z4N2 1603 aa29.19■■■□□ 2.26
PNKP-215ENST00000600910 CFAP70Q5T0N1 1121 aa29.19■■■□□ 2.26
PNKP-215ENST00000600910 MED14O60244 1454 aa29.18■■■□□ 2.26
PNKP-215ENST00000600910 C14orf93Q9H972 538 aaKnown RBP29.17■■■□□ 2.26
PNKP-215ENST00000600910 NPHP4O75161 1426 aaPredicted RBP29.17■■■□□ 2.26
PNKP-215ENST00000600910 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
PNKP-215ENST00000600910 KIAA1210Q9ULL0 1709 aa29.16■■■□□ 2.26
PNKP-215ENST00000600910 LAMC1P11047 1609 aa29.16■■■□□ 2.26
PNKP-215ENST00000600910 RALGAPBQ86X10 1494 aa29.16■■■□□ 2.26
PNKP-215ENST00000600910 STRCQ7RTU9 1775 aa29.15■■■□□ 2.26
PNKP-215ENST00000600910 ADAMTS13Q76LX8 1427 aa29.15■■■□□ 2.26
PNKP-215ENST00000600910 NBPF1Q3BBV0 1214 aa29.13■■■□□ 2.25
PNKP-215ENST00000600910 SLC26A8Q96RN1 970 aa29.12■■■□□ 2.25
PNKP-215ENST00000600910 SETD1AO15047 1707 aaKnown RBP29.12■■■□□ 2.25
PNKP-215ENST00000600910 ROCK2O75116 1388 aaKnown RBP29.12■■■□□ 2.25
PNKP-215ENST00000600910 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
PNKP-215ENST00000600910 TMEM132EQ6IEE7 984 aa29.08■■■□□ 2.25
PNKP-215ENST00000600910 ASXL1Q8IXJ9 1541 aa29.07■■■□□ 2.24
PNKP-215ENST00000600910 ADGRB1O14514 1584 aa29.07■■■□□ 2.24
PNKP-215ENST00000600910 TBX22Q9Y458 520 aa29.07■■■□□ 2.24
PNKP-215ENST00000600910 METP08581 1390 aa29.06■■■□□ 2.24
PNKP-215ENST00000600910 GPRASP1Q5JY77 1395 aa29.06■■■□□ 2.24
PNKP-215ENST00000600910 CARD11Q9BXL7 1154 aa29.05■■■□□ 2.24
PNKP-215ENST00000600910 YTHDC2Q9H6S0 1430 aaKnown RBP28.98■■■□□ 2.23
PNKP-215ENST00000600910 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
PNKP-215ENST00000600910 PIK3R4Q99570 1358 aa28.96■■■□□ 2.23
PNKP-215ENST00000600910 STK26Q9P289 416 aa28.96■■■□□ 2.23
PNKP-215ENST00000600910 PTPRUQ92729 1446 aa28.96■■■□□ 2.23
PNKP-215ENST00000600910 LRPPRCP42704 1394 aaKnown RBP28.95■■■□□ 2.22
PNKP-215ENST00000600910 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
PNKP-215ENST00000600910 USP47Q96K76 1375 aa28.92■■■□□ 2.22
PNKP-215ENST00000600910 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
PNKP-215ENST00000600910 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
PNKP-215ENST00000600910 ABCC11Q96J66 1382 aa28.91■■■□□ 2.22
PNKP-215ENST00000600910 KNDC1Q76NI1 1749 aa28.89■■■□□ 2.21
PNKP-215ENST00000600910 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.21
PNKP-215ENST00000600910 TECPR2O15040 1411 aa28.87■■■□□ 2.21
PNKP-215ENST00000600910 EIF4G2P78344 907 aaKnown RBP eCLIP28.87■■■□□ 2.21
PNKP-215ENST00000600910 ARHGEF28Q8N1W1 1705 aaKnown RBP28.87■■■□□ 2.21
PNKP-215ENST00000600910 EIF3AQ14152 1382 aaKnown RBP28.86■■■□□ 2.21
PNKP-215ENST00000600910 KCNA6P17658 529 aa28.86■■■□□ 2.21
PNKP-215ENST00000600910 CPS1P31327 1500 aa28.86■■■□□ 2.21
PNKP-215ENST00000600910 DLC1Q96QB1 1528 aa28.86■■■□□ 2.21
PNKP-215ENST00000600910 NWD1Q149M9 1564 aa28.86■■■□□ 2.21
PNKP-215ENST00000600910 HSPA5P11021 654 aaKnown RBP28.84■■■□□ 2.21
PNKP-215ENST00000600910 ROBO2Q9HCK4 1378 aa28.83■■■□□ 2.21
PNKP-215ENST00000600910 PTCH1Q13635 1447 aa28.82■■■□□ 2.2
PNKP-215ENST00000600910 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
PNKP-215ENST00000600910 STRCP1A6NGW2 1772 aa28.81■■■□□ 2.2
PNKP-215ENST00000600910 PRAM1Q96QH2 718 aa28.81■■■□□ 2.2
PNKP-215ENST00000600910 ZNF335Q9H4Z2 1342 aaPredicted RBP28.8■■■□□ 2.2
PNKP-215ENST00000600910 HIRIP3Q9BW71 556 aaPredicted RBP28.8■■■□□ 2.2
PNKP-215ENST00000600910 FAM135BQ49AJ0 1406 aa28.8■■■□□ 2.2
PNKP-215ENST00000600910 WAPLQ7Z5K2 1190 aa28.8■■■□□ 2.2
PNKP-215ENST00000600910 SIRT1Q96EB6 747 aa28.8■■■□□ 2.2
PNKP-215ENST00000600910 CENPJQ9HC77 1338 aaPredicted RBP28.79■■■□□ 2.2
PNKP-215ENST00000600910 POGKQ9P215 609 aa28.79■■■□□ 2.2
PNKP-215ENST00000600910 PLEKHH1Q9ULM0 1364 aa28.78■■■□□ 2.2
PNKP-215ENST00000600910 NKTRP30414 1462 aaKnown RBP28.77■■■□□ 2.2
PNKP-215ENST00000600910 SAFB2Q14151 953 aaKnown RBP eCLIP28.76■■■□□ 2.2
PNKP-215ENST00000600910 QRICH2Q9H0J4 1663 aa28.75■■■□□ 2.19
PNKP-215ENST00000600910 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
PNKP-215ENST00000600910 TESK2Q96S53 571 aa28.71■■■□□ 2.19
PNKP-215ENST00000600910 RBM33Q96EV2 1170 aaKnown RBP28.7■■■□□ 2.19
PNKP-215ENST00000600910 SBNO2Q9Y2G9 1366 aa28.69■■■□□ 2.18
PNKP-215ENST00000600910 MINK1Q8N4C8 1332 aaPredicted RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms