RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	PPP1R15A	O75807	674 aa	Predicted RBP	32.87	■■■□□ 2.85
FARP1-231	ENST00000600648	MYO5B	Q9ULV0	1848 aa		32.86	■■■□□ 2.85
FARP1-231	ENST00000600648	KCNA6	P17658	529 aa		32.86	■■■□□ 2.85
FARP1-231	ENST00000600648	RIMS2	Q9UQ26	1411 aa		32.85	■■■□□ 2.85
FARP1-231	ENST00000600648	ZFYVE9	O95405	1425 aa		32.85	■■■□□ 2.85
FARP1-231	ENST00000600648	RBM33	Q96EV2	1170 aa	Known RBP	32.84	■■■□□ 2.85
FARP1-231	ENST00000600648	TMEM131L	A2VDJ0	1609 aa		32.84	■■■□□ 2.85
FARP1-231	ENST00000600648	TMEM94	Q12767	1356 aa		32.83	■■■□□ 2.85
FARP1-231	ENST00000600648	XIRP1	Q702N8	1843 aa	Known RBP	32.82	■■■□□ 2.84
FARP1-231	ENST00000600648	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.82	■■■□□ 2.84
FARP1-231	ENST00000600648	PROSER2	Q86WR7	435 aa	Predicted RBP	32.82	■■■□□ 2.84
FARP1-231	ENST00000600648	HDGF	P51858	240 aa	Known RBP	32.8	■■■□□ 2.84
FARP1-231	ENST00000600648	PLEKHG1	Q9ULL1	1385 aa		32.79	■■■□□ 2.84
FARP1-231	ENST00000600648	RRBP1	Q9P2E9	1410 aa	Known RBP	32.78	■■■□□ 2.84
FARP1-231	ENST00000600648	MED1	Q15648	1581 aa	Predicted RBP	32.75	■■■□□ 2.83
FARP1-231	ENST00000600648	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
FARP1-231	ENST00000600648	SOCS7	O14512	581 aa		32.73	■■■□□ 2.83
FARP1-231	ENST00000600648	NWD1	Q149M9	1564 aa		32.7	■■■□□ 2.83
FARP1-231	ENST00000600648	NKTR	P30414	1462 aa	Known RBP	32.69	■■■□□ 2.82
FARP1-231	ENST00000600648	TBX22	Q9Y458	520 aa		32.67	■■■□□ 2.82
FARP1-231	ENST00000600648	NAIP	Q13075	1403 aa		32.66	■■■□□ 2.82
FARP1-231	ENST00000600648	ADAMTS13	Q76LX8	1427 aa		32.63	■■■□□ 2.81
FARP1-231	ENST00000600648	MSH6	P52701	1360 aa		32.62	■■■□□ 2.81
FARP1-231	ENST00000600648	FAM135B	Q49AJ0	1406 aa		32.61	■■■□□ 2.81
FARP1-231	ENST00000600648	CHD2	O14647	1828 aa	Known RBP	32.61	■■■□□ 2.81
FARP1-231	ENST00000600648	SPHKAP	Q2M3C7	1700 aa		32.61	■■■□□ 2.81
FARP1-231	ENST00000600648	PHF23	Q9BUL5	403 aa	Predicted RBP	32.61	■■■□□ 2.81
FARP1-231	ENST00000600648	ZNF326	Q5BKZ1	582 aa	Known RBP	32.6	■■■□□ 2.81
FARP1-231	ENST00000600648	TRIM52	Q96A61	297 aa		32.59	■■■□□ 2.81
FARP1-231	ENST00000600648	C14orf37	Q86TY3	774 aa		32.56	■■■□□ 2.8
FARP1-231	ENST00000600648	DIP2A	Q14689	1571 aa		32.53	■■■□□ 2.8
FARP1-231	ENST00000600648	ROBO1	Q9Y6N7	1651 aa		32.53	■■■□□ 2.8
FARP1-231	ENST00000600648	SLAIN2	Q9P270	581 aa		32.52	■■■□□ 2.8
FARP1-231	ENST00000600648	HFM1	A2PYH4	1435 aa		32.51	■■■□□ 2.8
FARP1-231	ENST00000600648	PIK3R4	Q99570	1358 aa		32.5	■■■□□ 2.79
FARP1-231	ENST00000600648	CLTCL1	P53675	1640 aa		32.49	■■■□□ 2.79
FARP1-231	ENST00000600648	AMOTL2	Q9Y2J4	779 aa		32.49	■■■□□ 2.79
FARP1-231	ENST00000600648	TRPM2	O94759	1503 aa		32.48	■■■□□ 2.79
FARP1-231	ENST00000600648	PTPRU	Q92729	1446 aa		32.47	■■■□□ 2.79
FARP1-231	ENST00000600648	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.45	■■■□□ 2.79
FARP1-231	ENST00000600648	NRXN3	Q9Y4C0	1643 aa		32.43	■■■□□ 2.78
FARP1-231	ENST00000600648	NCOA3	Q9Y6Q9	1424 aa		32.43	■■■□□ 2.78
FARP1-231	ENST00000600648	SETBP1	Q9Y6X0	1596 aa		32.41	■■■□□ 2.78
FARP1-231	ENST00000600648	C19orf44	Q9H6X5	657 aa		32.4	■■■□□ 2.78
FARP1-231	ENST00000600648	ATF3	P18847	181 aa		32.39	■■■□□ 2.78
FARP1-231	ENST00000600648	NEXMIF	Q5QGS0	1516 aa		32.39	■■■□□ 2.78
FARP1-231	ENST00000600648	MET	P08581	1390 aa		32.38	■■■□□ 2.77
FARP1-231	ENST00000600648	CADPS2	Q86UW7	1296 aa		32.37	■■■□□ 2.77
FARP1-231	ENST00000600648	KIF1B	O60333	1816 aa		32.36	■■■□□ 2.77
FARP1-231	ENST00000600648	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.36	■■■□□ 2.77
FARP1-231	ENST00000600648	FOXD1	Q16676	465 aa		32.35	■■■□□ 2.77
FARP1-231	ENST00000600648	PHLPP1	O60346	1717 aa		32.34	■■■□□ 2.77
FARP1-231	ENST00000600648	RGS17	Q9UGC6	210 aa	Predicted RBP	32.33	■■■□□ 2.77
FARP1-231	ENST00000600648	XRN1	Q8IZH2	1706 aa	Known RBP	32.31	■■■□□ 2.76
FARP1-231	ENST00000600648	VGF	O15240	615 aa	Predicted RBP	32.26	■■■□□ 2.75
FARP1-231	ENST00000600648	JCAD	Q9P266	1359 aa		32.26	■■■□□ 2.75
FARP1-231	ENST00000600648	COL16A1	Q07092	1604 aa	Predicted RBP	32.23	■■■□□ 2.75
FARP1-231	ENST00000600648	BRINP3	Q76B58	766 aa		32.22	■■■□□ 2.75
FARP1-231	ENST00000600648	RPGRIP1L	Q68CZ1	1315 aa		32.22	■■■□□ 2.75
FARP1-231	ENST00000600648	MPHOSPH9	Q99550	1183 aa		32.21	■■■□□ 2.75
FARP1-231	ENST00000600648	DCC	P43146	1447 aa		32.2	■■■□□ 2.75
FARP1-231	ENST00000600648	POTEA	Q6S8J7	498 aa		32.17	■■■□□ 2.74
FARP1-231	ENST00000600648	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.17	■■■□□ 2.74
FARP1-231	ENST00000600648	RGL3	Q3MIN7	710 aa		32.16	■■■□□ 2.74
FARP1-231	ENST00000600648	CCDC144A	A2RUR9	1427 aa		32.16	■■■□□ 2.74
FARP1-231	ENST00000600648	MST1R	Q04912	1400 aa		32.16	■■■□□ 2.74
FARP1-231	ENST00000600648	ADGRL3	Q9HAR2	1447 aa		32.16	■■■□□ 2.74
FARP1-231	ENST00000600648	PPL	O60437	1756 aa		32.12	■■■□□ 2.73
FARP1-231	ENST00000600648	ASXL1	Q8IXJ9	1541 aa		32.12	■■■□□ 2.73
FARP1-231	ENST00000600648	ROBO2	Q9HCK4	1378 aa		32.12	■■■□□ 2.73
FARP1-231	ENST00000600648	SETD1A	O15047	1707 aa	Known RBP	32.12	■■■□□ 2.73
FARP1-231	ENST00000600648	NALCN	Q8IZF0	1738 aa		32.11	■■■□□ 2.73
FARP1-231	ENST00000600648	ADGRF5	Q8IZF2	1346 aa		32.09	■■■□□ 2.73
FARP1-231	ENST00000600648	PTCH1	Q13635	1447 aa		32.09	■■■□□ 2.73
FARP1-231	ENST00000600648	LRP6	O75581	1613 aa		32.08	■■■□□ 2.73
FARP1-231	ENST00000600648	SPATA31A6	Q5VVP1	1343 aa		32.08	■■■□□ 2.73
FARP1-231	ENST00000600648	MEX3C	Q5U5Q3	659 aa	Known RBP	32.08	■■■□□ 2.73
FARP1-231	ENST00000600648	DDX17	Q92841	729 aa	Known RBP	32.08	■■■□□ 2.73
FARP1-231	ENST00000600648	SETD5	Q9C0A6	1442 aa		32.07	■■■□□ 2.72
FARP1-231	ENST00000600648	SPATA31E1	Q6ZUB1	1445 aa		32.05	■■■□□ 2.72
FARP1-231	ENST00000600648	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.04	■■■□□ 2.72
FARP1-231	ENST00000600648	NUTM2E	B1AL46	878 aa	Predicted RBP	32.04	■■■□□ 2.72
FARP1-231	ENST00000600648	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.04	■■■□□ 2.72
FARP1-231	ENST00000600648	SHPRH	Q149N8	1683 aa		32.02	■■■□□ 2.72
FARP1-231	ENST00000600648	C1orf167	Q5SNV9	1468 aa		32	■■■□□ 2.71
FARP1-231	ENST00000600648	STK26	Q9P289	416 aa		32	■■■□□ 2.71
FARP1-231	ENST00000600648	ANKRD30B	Q9BXX2	1392 aa		31.98	■■■□□ 2.71
FARP1-231	ENST00000600648	NHSL1	Q5SYE7	1610 aa		31.98	■■■□□ 2.71
FARP1-231	ENST00000600648	PRAG1	Q86YV5	1406 aa		31.97	■■■□□ 2.71
FARP1-231	ENST00000600648	RAB3GAP2	Q9H2M9	1393 aa		31.96	■■■□□ 2.71
FARP1-231	ENST00000600648	LRRC59	Q96AG4	307 aa	Known RBP	31.96	■■■□□ 2.71
FARP1-231	ENST00000600648	ORAI2	Q96SN7	254 aa		31.96	■■■□□ 2.71
FARP1-231	ENST00000600648	TMEM132E	Q6IEE7	984 aa		31.95	■■■□□ 2.71
FARP1-231	ENST00000600648	ACIN1	Q9UKV3	1341 aa	Known RBP	31.94	■■■□□ 2.7
FARP1-231	ENST00000600648	IFT172	Q9UG01	1749 aa		31.93	■■■□□ 2.7
FARP1-231	ENST00000600648	WAPL	Q7Z5K2	1190 aa		31.91	■■■□□ 2.7
FARP1-231	ENST00000600648	ZNF772	Q68DY9	489 aa	Predicted RBP	31.9	■■■□□ 2.7
FARP1-231	ENST00000600648	PIK3C2G	O75747	1445 aa		31.89	■■■□□ 2.7
FARP1-231	ENST00000600648	LRPPRC	P42704	1394 aa	Known RBP	31.88	■■■□□ 2.69
FARP1-231	ENST00000600648	PNPLA6	Q8IY17	1366 aa		31.88	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms