RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-218ENST00000600383 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-218ENST00000600383 MYOM2P54296 1465 aa20.96■□□□□ 0.95
HIF3A-218ENST00000600383 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
HIF3A-218ENST00000600383 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
HIF3A-218ENST00000600383 CLTCQ00610 1675 aaKnown RBP20.95■□□□□ 0.94
HIF3A-218ENST00000600383 TESK2Q96S53 571 aa20.95■□□□□ 0.94
HIF3A-218ENST00000600383 STAG3Q9UJ98 1225 aa20.95■□□□□ 0.94
HIF3A-218ENST00000600383 CCER2I3L3R5 266 aa20.95■□□□□ 0.94
HIF3A-218ENST00000600383 LAMC1P11047 1609 aa20.94■□□□□ 0.94
HIF3A-218ENST00000600383 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
HIF3A-218ENST00000600383 PIK3C2BO00750 1634 aa20.93■□□□□ 0.94
HIF3A-218ENST00000600383 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
HIF3A-218ENST00000600383 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
HIF3A-218ENST00000600383 TMF1P82094 1093 aa20.92■□□□□ 0.94
HIF3A-218ENST00000600383 ERVK-7P63135 1459 aa20.91■□□□□ 0.94
HIF3A-218ENST00000600383 ZMYM3Q14202 1370 aa20.9■□□□□ 0.94
HIF3A-218ENST00000600383 SCAF11Q99590 1463 aaKnown RBP20.9■□□□□ 0.94
HIF3A-218ENST00000600383 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.94
HIF3A-218ENST00000600383 C14orf93Q9H972 538 aaKnown RBP20.89■□□□□ 0.94
HIF3A-218ENST00000600383 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
HIF3A-218ENST00000600383 TMEM132EQ6IEE7 984 aa20.89■□□□□ 0.93
HIF3A-218ENST00000600383 PPLO60437 1756 aa20.89■□□□□ 0.93
HIF3A-218ENST00000600383 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
HIF3A-218ENST00000600383 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
HIF3A-218ENST00000600383 KIAA1210Q9ULL0 1709 aa20.86■□□□□ 0.93
HIF3A-218ENST00000600383 EIF3AQ14152 1382 aaKnown RBP20.86■□□□□ 0.93
HIF3A-218ENST00000600383 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
HIF3A-218ENST00000600383 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
HIF3A-218ENST00000600383 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
HIF3A-218ENST00000600383 NEXMIFQ5QGS0 1516 aa20.83■□□□□ 0.93
HIF3A-218ENST00000600383 MYO5BQ9ULV0 1848 aa20.83■□□□□ 0.92
HIF3A-218ENST00000600383 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.92
HIF3A-218ENST00000600383 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
HIF3A-218ENST00000600383 CEBPAP49715 358 aaPredicted RBP20.8■□□□□ 0.92
HIF3A-218ENST00000600383 CCDC184Q52MB2 194 aa20.8■□□□□ 0.92
HIF3A-218ENST00000600383 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
HIF3A-218ENST00000600383 PANK3Q9H999 370 aa20.77■□□□□ 0.92
HIF3A-218ENST00000600383 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
HIF3A-218ENST00000600383 STK26Q9P289 416 aa20.76■□□□□ 0.91
HIF3A-218ENST00000600383 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
HIF3A-218ENST00000600383 SETBP1Q9Y6X0 1596 aa20.75■□□□□ 0.91
HIF3A-218ENST00000600383 ZFYVE9O95405 1425 aa20.75■□□□□ 0.91
HIF3A-218ENST00000600383 TNRQ92752 1358 aa20.74■□□□□ 0.91
HIF3A-218ENST00000600383 A2ML1A8K2U0 1454 aa20.74■□□□□ 0.91
HIF3A-218ENST00000600383 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
HIF3A-218ENST00000600383 ADGRB1O14514 1584 aa20.73■□□□□ 0.91
HIF3A-218ENST00000600383 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
HIF3A-218ENST00000600383 SAFB2Q14151 953 aaKnown RBP eCLIP20.71■□□□□ 0.91
HIF3A-218ENST00000600383 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
HIF3A-218ENST00000600383 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
HIF3A-218ENST00000600383 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
HIF3A-218ENST00000600383 BCANQ96GW7 911 aa20.68■□□□□ 0.9
HIF3A-218ENST00000600383 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
HIF3A-218ENST00000600383 HDGFP51858 240 aaKnown RBP20.66■□□□□ 0.9
HIF3A-218ENST00000600383 RALBP1Q15311 655 aa20.66■□□□□ 0.9
HIF3A-218ENST00000600383 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.66■□□□□ 0.9
HIF3A-218ENST00000600383 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
HIF3A-218ENST00000600383 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
HIF3A-218ENST00000600383 GTF3C3Q9Y5Q9 886 aa20.64■□□□□ 0.89
HIF3A-218ENST00000600383 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.89
HIF3A-218ENST00000600383 HNRNPUQ00839 825 aaKnown RBP eCLIP20.63■□□□□ 0.89
HIF3A-218ENST00000600383 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
HIF3A-218ENST00000600383 POGKQ9P215 609 aa20.63■□□□□ 0.89
HIF3A-218ENST00000600383 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
HIF3A-218ENST00000600383 MYO3AQ8NEV4 1616 aa20.62■□□□□ 0.89
HIF3A-218ENST00000600383 PRAM1Q96QH2 718 aa20.62■□□□□ 0.89
HIF3A-218ENST00000600383 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
HIF3A-218ENST00000600383 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
HIF3A-218ENST00000600383 YTHDC2Q9H6S0 1430 aaKnown RBP20.61■□□□□ 0.89
HIF3A-218ENST00000600383 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
HIF3A-218ENST00000600383 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
HIF3A-218ENST00000600383 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
HIF3A-218ENST00000600383 C3P01024 1663 aa20.59■□□□□ 0.89
HIF3A-218ENST00000600383 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
HIF3A-218ENST00000600383 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
HIF3A-218ENST00000600383 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
HIF3A-218ENST00000600383 ARHGEF28Q8N1W1 1705 aaKnown RBP20.57■□□□□ 0.88
HIF3A-218ENST00000600383 MINK1Q8N4C8 1332 aaPredicted RBP20.57■□□□□ 0.88
HIF3A-218ENST00000600383 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
HIF3A-218ENST00000600383 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
HIF3A-218ENST00000600383 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
HIF3A-218ENST00000600383 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
HIF3A-218ENST00000600383 LTKP29376 864 aa20.56■□□□□ 0.88
HIF3A-218ENST00000600383 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
HIF3A-218ENST00000600383 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
HIF3A-218ENST00000600383 WAPLQ7Z5K2 1190 aa20.54■□□□□ 0.88
HIF3A-218ENST00000600383 MYOM1P52179 1685 aa20.54■□□□□ 0.88
HIF3A-218ENST00000600383 PTPRMP28827 1452 aa20.54■□□□□ 0.88
HIF3A-218ENST00000600383 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-218ENST00000600383 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
HIF3A-218ENST00000600383 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
HIF3A-218ENST00000600383 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
HIF3A-218ENST00000600383 METP08581 1390 aa20.53■□□□□ 0.88
HIF3A-218ENST00000600383 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
HIF3A-218ENST00000600383 THEMISQ8N1K5 641 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-218ENST00000600383 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-218ENST00000600383 LRPPRCP42704 1394 aaKnown RBP20.5■□□□□ 0.87
HIF3A-218ENST00000600383 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
HIF3A-218ENST00000600383 TULP4Q9NRJ4 1543 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms