RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 NEURL4Q96JN8 1562 aa17.34■□□□□ 0.37
FARP1-230ENST00000600380 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
FARP1-230ENST00000600380 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
FARP1-230ENST00000600380 KIF1BO60333 1816 aa17.32■□□□□ 0.36
FARP1-230ENST00000600380 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
FARP1-230ENST00000600380 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
FARP1-230ENST00000600380 MED14O60244 1454 aa17.29■□□□□ 0.36
FARP1-230ENST00000600380 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
FARP1-230ENST00000600380 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
FARP1-230ENST00000600380 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
FARP1-230ENST00000600380 ADGRF5Q8IZF2 1346 aa17.26■□□□□ 0.35
FARP1-230ENST00000600380 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
FARP1-230ENST00000600380 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
FARP1-230ENST00000600380 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
FARP1-230ENST00000600380 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
FARP1-230ENST00000600380 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
FARP1-230ENST00000600380 PPLO60437 1756 aa17.23■□□□□ 0.35
FARP1-230ENST00000600380 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
FARP1-230ENST00000600380 ADAMTS13Q76LX8 1427 aa17.22■□□□□ 0.35
FARP1-230ENST00000600380 HDGFP51858 240 aaKnown RBP17.22■□□□□ 0.35
FARP1-230ENST00000600380 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
FARP1-230ENST00000600380 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
FARP1-230ENST00000600380 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
FARP1-230ENST00000600380 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
FARP1-230ENST00000600380 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.35
FARP1-230ENST00000600380 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
FARP1-230ENST00000600380 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
FARP1-230ENST00000600380 BCANQ96GW7 911 aa17.2■□□□□ 0.34
FARP1-230ENST00000600380 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
FARP1-230ENST00000600380 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
FARP1-230ENST00000600380 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
FARP1-230ENST00000600380 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
FARP1-230ENST00000600380 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
FARP1-230ENST00000600380 METP08581 1390 aa17.15■□□□□ 0.34
FARP1-230ENST00000600380 MYOM2P54296 1465 aa17.15■□□□□ 0.34
FARP1-230ENST00000600380 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
FARP1-230ENST00000600380 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
FARP1-230ENST00000600380 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
FARP1-230ENST00000600380 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
FARP1-230ENST00000600380 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
FARP1-230ENST00000600380 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
FARP1-230ENST00000600380 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
FARP1-230ENST00000600380 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
FARP1-230ENST00000600380 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
FARP1-230ENST00000600380 TMEM132EQ6IEE7 984 aa17.11■□□□□ 0.33
FARP1-230ENST00000600380 KCNA6P17658 529 aa17.1■□□□□ 0.33
FARP1-230ENST00000600380 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
FARP1-230ENST00000600380 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
FARP1-230ENST00000600380 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
FARP1-230ENST00000600380 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
FARP1-230ENST00000600380 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
FARP1-230ENST00000600380 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
FARP1-230ENST00000600380 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
FARP1-230ENST00000600380 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.32
FARP1-230ENST00000600380 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
FARP1-230ENST00000600380 CHD2O14647 1828 aaKnown RBP17.06■□□□□ 0.32
FARP1-230ENST00000600380 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
FARP1-230ENST00000600380 NWD1Q149M9 1564 aa17.04■□□□□ 0.32
FARP1-230ENST00000600380 STK26Q9P289 416 aa17.04■□□□□ 0.32
FARP1-230ENST00000600380 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
FARP1-230ENST00000600380 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
FARP1-230ENST00000600380 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
FARP1-230ENST00000600380 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.32
FARP1-230ENST00000600380 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
FARP1-230ENST00000600380 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.31
FARP1-230ENST00000600380 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
FARP1-230ENST00000600380 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
FARP1-230ENST00000600380 CPS1P31327 1500 aa17■□□□□ 0.31
FARP1-230ENST00000600380 TMEM94Q12767 1356 aa17■□□□□ 0.31
FARP1-230ENST00000600380 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
FARP1-230ENST00000600380 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
FARP1-230ENST00000600380 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
FARP1-230ENST00000600380 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
FARP1-230ENST00000600380 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
FARP1-230ENST00000600380 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
FARP1-230ENST00000600380 LAMC1P11047 1609 aa16.97■□□□□ 0.31
FARP1-230ENST00000600380 TECPR2O15040 1411 aa16.96■□□□□ 0.31
FARP1-230ENST00000600380 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.31
FARP1-230ENST00000600380 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
FARP1-230ENST00000600380 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.3
FARP1-230ENST00000600380 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
FARP1-230ENST00000600380 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
FARP1-230ENST00000600380 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
FARP1-230ENST00000600380 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
FARP1-230ENST00000600380 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
FARP1-230ENST00000600380 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
FARP1-230ENST00000600380 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
FARP1-230ENST00000600380 KNDC1Q76NI1 1749 aa16.9■□□□□ 0.3
FARP1-230ENST00000600380 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
FARP1-230ENST00000600380 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
FARP1-230ENST00000600380 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
FARP1-230ENST00000600380 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
FARP1-230ENST00000600380 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
FARP1-230ENST00000600380 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
FARP1-230ENST00000600380 IQSEC2Q5JU85 1478 aa16.87■□□□□ 0.29
FARP1-230ENST00000600380 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
FARP1-230ENST00000600380 POGKQ9P215 609 aa16.87■□□□□ 0.29
FARP1-230ENST00000600380 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
FARP1-230ENST00000600380 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
FARP1-230ENST00000600380 NALCNQ8IZF0 1738 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms