RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 LAMC1P11047 1609 aa23.5■■□□□ 1.35
STRN4-218ENST00000600358 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
STRN4-218ENST00000600358 PRAG1Q86YV5 1406 aa23.48■■□□□ 1.35
STRN4-218ENST00000600358 PPP1R15AO75807 674 aaPredicted RBP23.47■■□□□ 1.35
STRN4-218ENST00000600358 TMEM2Q9UHN6 1383 aa23.47■■□□□ 1.35
STRN4-218ENST00000600358 POLR1AO95602 1720 aaPredicted RBP23.46■■□□□ 1.35
STRN4-218ENST00000600358 RIMS2Q9UQ26 1411 aa23.46■■□□□ 1.35
STRN4-218ENST00000600358 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
STRN4-218ENST00000600358 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
STRN4-218ENST00000600358 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
STRN4-218ENST00000600358 STAG3Q9UJ98 1225 aa23.44■■□□□ 1.34
STRN4-218ENST00000600358 PIK3C2GO75747 1445 aa23.43■■□□□ 1.34
STRN4-218ENST00000600358 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
STRN4-218ENST00000600358 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
STRN4-218ENST00000600358 ZNF326Q5BKZ1 582 aaKnown RBP23.42■■□□□ 1.34
STRN4-218ENST00000600358 THEMISQ8N1K5 641 aaPredicted RBP23.42■■□□□ 1.34
STRN4-218ENST00000600358 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
STRN4-218ENST00000600358 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
STRN4-218ENST00000600358 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
STRN4-218ENST00000600358 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
STRN4-218ENST00000600358 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
STRN4-218ENST00000600358 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
STRN4-218ENST00000600358 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
STRN4-218ENST00000600358 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
STRN4-218ENST00000600358 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
STRN4-218ENST00000600358 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
STRN4-218ENST00000600358 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
STRN4-218ENST00000600358 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
STRN4-218ENST00000600358 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
STRN4-218ENST00000600358 PLEKHG1Q9ULL1 1385 aa23.34■■□□□ 1.33
STRN4-218ENST00000600358 MED14O60244 1454 aa23.33■■□□□ 1.33
STRN4-218ENST00000600358 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
STRN4-218ENST00000600358 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
STRN4-218ENST00000600358 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
STRN4-218ENST00000600358 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
STRN4-218ENST00000600358 EID1Q9Y6B2 187 aa23.29■■□□□ 1.32
STRN4-218ENST00000600358 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
STRN4-218ENST00000600358 KNDC1Q76NI1 1749 aa23.27■■□□□ 1.32
STRN4-218ENST00000600358 LTKP29376 864 aa23.26■■□□□ 1.31
STRN4-218ENST00000600358 STRCQ7RTU9 1775 aa23.26■■□□□ 1.31
STRN4-218ENST00000600358 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
STRN4-218ENST00000600358 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
STRN4-218ENST00000600358 C14orf93Q9H972 538 aaKnown RBP23.25■■□□□ 1.31
STRN4-218ENST00000600358 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
STRN4-218ENST00000600358 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
STRN4-218ENST00000600358 NUTM2DQ5VT03 806 aaPredicted RBP23.21■■□□□ 1.31
STRN4-218ENST00000600358 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
STRN4-218ENST00000600358 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
STRN4-218ENST00000600358 CFAP70Q5T0N1 1121 aa23.18■■□□□ 1.3
STRN4-218ENST00000600358 XRN1Q8IZH2 1706 aaKnown RBP23.18■■□□□ 1.3
STRN4-218ENST00000600358 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
STRN4-218ENST00000600358 PIK3R4Q99570 1358 aa23.17■■□□□ 1.3
STRN4-218ENST00000600358 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
STRN4-218ENST00000600358 CPS1P31327 1500 aa23.16■■□□□ 1.3
STRN4-218ENST00000600358 NWD1Q149M9 1564 aa23.15■■□□□ 1.3
STRN4-218ENST00000600358 NBPF1Q3BBV0 1214 aa23.15■■□□□ 1.3
STRN4-218ENST00000600358 TECPR2O15040 1411 aa23.15■■□□□ 1.3
STRN4-218ENST00000600358 TBX22Q9Y458 520 aa23.14■■□□□ 1.29
STRN4-218ENST00000600358 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
STRN4-218ENST00000600358 YTHDC2Q9H6S0 1430 aaKnown RBP23.13■■□□□ 1.29
STRN4-218ENST00000600358 USP47Q96K76 1375 aa23.13■■□□□ 1.29
STRN4-218ENST00000600358 LRPPRCP42704 1394 aaKnown RBP23.12■■□□□ 1.29
STRN4-218ENST00000600358 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
STRN4-218ENST00000600358 HSPA2P54652 639 aa23.1■■□□□ 1.29
STRN4-218ENST00000600358 METP08581 1390 aa23.1■■□□□ 1.29
STRN4-218ENST00000600358 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
STRN4-218ENST00000600358 NCKAP5LQ9HCH0 1330 aa23.08■■□□□ 1.29
STRN4-218ENST00000600358 ABCC11Q96J66 1382 aa23.08■■□□□ 1.29
STRN4-218ENST00000600358 PTCH1Q13635 1447 aa23.08■■□□□ 1.28
STRN4-218ENST00000600358 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
STRN4-218ENST00000600358 PTPRUQ92729 1446 aa23.06■■□□□ 1.28
STRN4-218ENST00000600358 SBNO2Q9Y2G9 1366 aa23.05■■□□□ 1.28
STRN4-218ENST00000600358 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
STRN4-218ENST00000600358 TMEM132EQ6IEE7 984 aa23.03■■□□□ 1.28
STRN4-218ENST00000600358 BCANQ96GW7 911 aa23.03■■□□□ 1.28
STRN4-218ENST00000600358 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
STRN4-218ENST00000600358 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
STRN4-218ENST00000600358 NKTRP30414 1462 aaKnown RBP23.02■■□□□ 1.28
STRN4-218ENST00000600358 STRCP1A6NGW2 1772 aa23■■□□□ 1.27
STRN4-218ENST00000600358 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
STRN4-218ENST00000600358 ADGRB2O60241 1585 aa23■■□□□ 1.27
STRN4-218ENST00000600358 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
STRN4-218ENST00000600358 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
STRN4-218ENST00000600358 CENPJQ9HC77 1338 aaPredicted RBP22.95■■□□□ 1.26
STRN4-218ENST00000600358 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
STRN4-218ENST00000600358 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
STRN4-218ENST00000600358 SLC24A1O60721 1099 aa22.94■■□□□ 1.26
STRN4-218ENST00000600358 ROBO2Q9HCK4 1378 aa22.93■■□□□ 1.26
STRN4-218ENST00000600358 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.93■■□□□ 1.26
STRN4-218ENST00000600358 KCNA6P17658 529 aa22.92■■□□□ 1.26
STRN4-218ENST00000600358 TESK2Q96S53 571 aa22.92■■□□□ 1.26
STRN4-218ENST00000600358 AMOTL2Q9Y2J4 779 aa22.92■■□□□ 1.26
STRN4-218ENST00000600358 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
STRN4-218ENST00000600358 STK26Q9P289 416 aa22.9■■□□□ 1.26
STRN4-218ENST00000600358 TULP4Q9NRJ4 1543 aa22.9■■□□□ 1.26
STRN4-218ENST00000600358 ZNF316A6NFI3 1004 aaPredicted RBP22.88■■□□□ 1.25
STRN4-218ENST00000600358 NCOA3Q9Y6Q9 1424 aa22.88■■□□□ 1.25
STRN4-218ENST00000600358 CDC42BPGQ6DT37 1551 aa22.88■■□□□ 1.25
STRN4-218ENST00000600358 XIRP1Q702N8 1843 aaKnown RBP22.87■■□□□ 1.25
STRN4-218ENST00000600358 PRAM1Q96QH2 718 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms