RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
IRF3-225ENST00000600022 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
IRF3-225ENST00000600022 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
IRF3-225ENST00000600022 POTEAQ6S8J7 498 aa21.11■□□□□ 0.97
IRF3-225ENST00000600022 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
IRF3-225ENST00000600022 MYO5BQ9ULV0 1848 aa21.1■□□□□ 0.97
IRF3-225ENST00000600022 RIMS2Q9UQ26 1411 aa21.1■□□□□ 0.97
IRF3-225ENST00000600022 SLAIN2Q9P270 581 aa21.09■□□□□ 0.97
IRF3-225ENST00000600022 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
IRF3-225ENST00000600022 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.96
IRF3-225ENST00000600022 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
IRF3-225ENST00000600022 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
IRF3-225ENST00000600022 ITGAEP38570 1179 aa21.07■□□□□ 0.96
IRF3-225ENST00000600022 TMEM131LA2VDJ0 1609 aa21.07■□□□□ 0.96
IRF3-225ENST00000600022 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
IRF3-225ENST00000600022 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
IRF3-225ENST00000600022 TBX22Q9Y458 520 aa21.04■□□□□ 0.96
IRF3-225ENST00000600022 MSH6P52701 1360 aa21.04■□□□□ 0.96
IRF3-225ENST00000600022 NKTRP30414 1462 aaKnown RBP21.04■□□□□ 0.96
IRF3-225ENST00000600022 ADAMTS13Q76LX8 1427 aa21.02■□□□□ 0.96
IRF3-225ENST00000600022 CHD2O14647 1828 aaKnown RBP21.01■□□□□ 0.95
IRF3-225ENST00000600022 E9PCH4 1651 aa21.01■□□□□ 0.95
IRF3-225ENST00000600022 UNC13BO14795 1591 aa21.01■□□□□ 0.95
IRF3-225ENST00000600022 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
IRF3-225ENST00000600022 NUP155O75694 1391 aa20.99■□□□□ 0.95
IRF3-225ENST00000600022 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.98■□□□□ 0.95
IRF3-225ENST00000600022 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
IRF3-225ENST00000600022 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
IRF3-225ENST00000600022 PTPRUQ92729 1446 aa20.95■□□□□ 0.95
IRF3-225ENST00000600022 AMOTL2Q9Y2J4 779 aa20.95■□□□□ 0.94
IRF3-225ENST00000600022 PHLPP1O60346 1717 aa20.94■□□□□ 0.94
IRF3-225ENST00000600022 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
IRF3-225ENST00000600022 C19orf44Q9H6X5 657 aa20.92■□□□□ 0.94
IRF3-225ENST00000600022 JCADQ9P266 1359 aa20.92■□□□□ 0.94
IRF3-225ENST00000600022 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
IRF3-225ENST00000600022 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.94
IRF3-225ENST00000600022 ATF3P18847 181 aa20.89■□□□□ 0.93
IRF3-225ENST00000600022 LRP6O75581 1613 aa20.89■□□□□ 0.93
IRF3-225ENST00000600022 NCOA3Q9Y6Q9 1424 aa20.88■□□□□ 0.93
IRF3-225ENST00000600022 CADPS2Q86UW7 1296 aa20.88■□□□□ 0.93
IRF3-225ENST00000600022 PIK3R4Q99570 1358 aa20.86■□□□□ 0.93
IRF3-225ENST00000600022 BRINP3Q76B58 766 aa20.86■□□□□ 0.93
IRF3-225ENST00000600022 METP08581 1390 aa20.85■□□□□ 0.93
IRF3-225ENST00000600022 ZNF326Q5BKZ1 582 aaKnown RBP20.85■□□□□ 0.93
IRF3-225ENST00000600022 NRXN3Q9Y4C0 1643 aa20.83■□□□□ 0.93
IRF3-225ENST00000600022 DIP2AQ14689 1571 aa20.83■□□□□ 0.92
IRF3-225ENST00000600022 SETD1AO15047 1707 aaKnown RBP20.83■□□□□ 0.92
IRF3-225ENST00000600022 DDX17Q92841 729 aaKnown RBP20.82■□□□□ 0.92
IRF3-225ENST00000600022 TRPM2O94759 1503 aa20.82■□□□□ 0.92
IRF3-225ENST00000600022 NUTM2BA6NNL0 878 aaPredicted RBP20.81■□□□□ 0.92
IRF3-225ENST00000600022 NUTM2EB1AL46 878 aaPredicted RBP20.81■□□□□ 0.92
IRF3-225ENST00000600022 NUTM2AQ8IVF1 878 aaPredicted RBP20.81■□□□□ 0.92
IRF3-225ENST00000600022 MEX3CQ5U5Q3 659 aaKnown RBP20.8■□□□□ 0.92
IRF3-225ENST00000600022 SPATA31A6Q5VVP1 1343 aa20.79■□□□□ 0.92
IRF3-225ENST00000600022 AHDC1Q5TGY3 1603 aaPredicted RBP20.79■□□□□ 0.92
IRF3-225ENST00000600022 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
IRF3-225ENST00000600022 SETBP1Q9Y6X0 1596 aa20.76■□□□□ 0.91
IRF3-225ENST00000600022 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
IRF3-225ENST00000600022 XRN1Q8IZH2 1706 aaKnown RBP20.76■□□□□ 0.91
IRF3-225ENST00000600022 MST1RQ04912 1400 aa20.76■□□□□ 0.91
IRF3-225ENST00000600022 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
IRF3-225ENST00000600022 NAIPQ13075 1403 aa20.73■□□□□ 0.91
IRF3-225ENST00000600022 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
IRF3-225ENST00000600022 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
IRF3-225ENST00000600022 ASXL1Q8IXJ9 1541 aa20.73■□□□□ 0.91
IRF3-225ENST00000600022 SHPRHQ149N8 1683 aa20.72■□□□□ 0.91
IRF3-225ENST00000600022 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.91
IRF3-225ENST00000600022 DCCP43146 1447 aa20.7■□□□□ 0.9
IRF3-225ENST00000600022 AFF2P51816 1311 aa20.69■□□□□ 0.9
IRF3-225ENST00000600022 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
IRF3-225ENST00000600022 RRBP1Q9P2E9 1410 aaKnown RBP20.69■□□□□ 0.9
IRF3-225ENST00000600022 RXRBP28702 533 aa20.68■□□□□ 0.9
IRF3-225ENST00000600022 ADGRL3Q9HAR2 1447 aa20.68■□□□□ 0.9
IRF3-225ENST00000600022 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
IRF3-225ENST00000600022 ORAI2Q96SN7 254 aa20.67■□□□□ 0.9
IRF3-225ENST00000600022 FOXD1Q16676 465 aa20.66■□□□□ 0.9
IRF3-225ENST00000600022 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
IRF3-225ENST00000600022 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
IRF3-225ENST00000600022 C8orf37Q96NL8 207 aa20.65■□□□□ 0.9
IRF3-225ENST00000600022 NHSL1Q5SYE7 1610 aa20.64■□□□□ 0.9
IRF3-225ENST00000600022 PNPLA6Q8IY17 1366 aa20.64■□□□□ 0.89
IRF3-225ENST00000600022 C1orf167Q5SNV9 1468 aa20.62■□□□□ 0.89
IRF3-225ENST00000600022 VGFO15240 615 aaPredicted RBP20.62■□□□□ 0.89
IRF3-225ENST00000600022 ADAMTS2O95450 1211 aa20.62■□□□□ 0.89
IRF3-225ENST00000600022 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
IRF3-225ENST00000600022 QTRT2Q9H974 415 aaKnown RBP20.61■□□□□ 0.89
IRF3-225ENST00000600022 KIF1BO60333 1816 aa20.6■□□□□ 0.89
IRF3-225ENST00000600022 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
IRF3-225ENST00000600022 NGLY1Q96IV0 654 aa20.57■□□□□ 0.88
IRF3-225ENST00000600022 SOS2Q07890 1332 aaPredicted RBP20.56■□□□□ 0.88
IRF3-225ENST00000600022 ADGRF5Q8IZF2 1346 aa20.56■□□□□ 0.88
IRF3-225ENST00000600022 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
IRF3-225ENST00000600022 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
IRF3-225ENST00000600022 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
IRF3-225ENST00000600022 RGS12O14924 1447 aa20.53■□□□□ 0.88
IRF3-225ENST00000600022 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
IRF3-225ENST00000600022 WAPLQ7Z5K2 1190 aa20.53■□□□□ 0.88
IRF3-225ENST00000600022 STK26Q9P289 416 aa20.53■□□□□ 0.88
IRF3-225ENST00000600022 CDK12Q9NYV4 1490 aaPredicted RBP20.52■□□□□ 0.88
IRF3-225ENST00000600022 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms