RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 HSP90AA2PQ14568 343 aaPredicted RBP21.51■■□□□ 1.03
GRAMD1A-211ENST00000599564 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
GRAMD1A-211ENST00000599564 MAGI2Q86UL8 1455 aa21.5■■□□□ 1.03
GRAMD1A-211ENST00000599564 VIRMAQ69YN4 1812 aaKnown RBP21.49■■□□□ 1.03
GRAMD1A-211ENST00000599564 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
GRAMD1A-211ENST00000599564 NKTRP30414 1462 aaKnown RBP21.48■■□□□ 1.03
GRAMD1A-211ENST00000599564 HSP90AA1P07900 732 aaKnown RBP21.48■■□□□ 1.03
GRAMD1A-211ENST00000599564 TRMT2AQ8IZ69 625 aaKnown RBP21.48■■□□□ 1.03
GRAMD1A-211ENST00000599564 UPF2Q9HAU5 1272 aaKnown RBP21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 A2MP01023 1474 aa21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 CLCN1P35523 988 aa21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 MCM4P33991 863 aa21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
GRAMD1A-211ENST00000599564 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
GRAMD1A-211ENST00000599564 TBC1D32Q96NH3 1257 aa21.45■■□□□ 1.02
GRAMD1A-211ENST00000599564 CGNL1Q0VF96 1302 aa21.45■■□□□ 1.02
GRAMD1A-211ENST00000599564 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
GRAMD1A-211ENST00000599564 PRDM15P57071 1507 aaPredicted RBP21.44■■□□□ 1.02
GRAMD1A-211ENST00000599564 FAM135AQ9P2D6 1515 aa21.44■■□□□ 1.02
GRAMD1A-211ENST00000599564 PTPRGP23470 1445 aa21.43■■□□□ 1.02
GRAMD1A-211ENST00000599564 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
GRAMD1A-211ENST00000599564 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
GRAMD1A-211ENST00000599564 E9PSI1 815 aa21.42■■□□□ 1.02
GRAMD1A-211ENST00000599564 TRAK2O60296 914 aa21.42■■□□□ 1.02
GRAMD1A-211ENST00000599564 CENPJQ9HC77 1338 aaPredicted RBP21.42■■□□□ 1.02
GRAMD1A-211ENST00000599564 NEUROD2Q15784 382 aa21.41■■□□□ 1.02
GRAMD1A-211ENST00000599564 PCDHB15Q9Y5E8 787 aa21.41■■□□□ 1.02
GRAMD1A-211ENST00000599564 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
GRAMD1A-211ENST00000599564 BCL2L13Q9BXK5 485 aa21.41■■□□□ 1.02
GRAMD1A-211ENST00000599564 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
GRAMD1A-211ENST00000599564 PDE3AQ14432 1141 aa21.39■■□□□ 1.02
GRAMD1A-211ENST00000599564 PLA2R1Q13018 1463 aa21.39■■□□□ 1.01
GRAMD1A-211ENST00000599564 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
GRAMD1A-211ENST00000599564 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
GRAMD1A-211ENST00000599564 ADCY10Q96PN6 1610 aa21.37■■□□□ 1.01
GRAMD1A-211ENST00000599564 RRP9O43818 475 aaKnown RBP21.37■■□□□ 1.01
GRAMD1A-211ENST00000599564 RLBP1P12271 317 aa21.37■■□□□ 1.01
GRAMD1A-211ENST00000599564 MFAP1P55081 439 aaKnown RBP21.36■■□□□ 1.01
GRAMD1A-211ENST00000599564 SHANK2Q9UPX8 1470 aa21.36■■□□□ 1.01
GRAMD1A-211ENST00000599564 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
GRAMD1A-211ENST00000599564 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
GRAMD1A-211ENST00000599564 GRPEL1Q9HAV7 217 aa21.34■■□□□ 1.01
GRAMD1A-211ENST00000599564 MRE11P49959 708 aa21.34■■□□□ 1.01
GRAMD1A-211ENST00000599564 CLASP1Q7Z460 1538 aa21.33■■□□□ 1.01
GRAMD1A-211ENST00000599564 ESPNB1AK53 854 aa21.33■■□□□ 1.01
GRAMD1A-211ENST00000599564 CHMP5Q9NZZ3 219 aa21.33■■□□□ 1
GRAMD1A-211ENST00000599564 PMFBP1Q8TBY8 1022 aa21.32■■□□□ 1
GRAMD1A-211ENST00000599564 WWC1Q8IX03 1113 aa21.31■■□□□ 1
GRAMD1A-211ENST00000599564 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
GRAMD1A-211ENST00000599564 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
GRAMD1A-211ENST00000599564 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
GRAMD1A-211ENST00000599564 PIK3C2GO75747 1445 aa21.3■■□□□ 1
GRAMD1A-211ENST00000599564 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
GRAMD1A-211ENST00000599564 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
GRAMD1A-211ENST00000599564 FBLN2P98095 1184 aa21.28■■□□□ 1
GRAMD1A-211ENST00000599564 LAMC1P11047 1609 aa21.28■■□□□ 1
GRAMD1A-211ENST00000599564 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
GRAMD1A-211ENST00000599564 TRIM44Q96DX7 344 aaPredicted RBP21.27■■□□□ 1
GRAMD1A-211ENST00000599564 GAS2L3Q86XJ1 694 aa21.26■□□□□ 0.99
GRAMD1A-211ENST00000599564 TNNT2P45379 298 aaPredicted RBP21.25■□□□□ 0.99
GRAMD1A-211ENST00000599564 CCDC141Q6ZP82 1450 aa21.25■□□□□ 0.99
GRAMD1A-211ENST00000599564 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
GRAMD1A-211ENST00000599564 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
GRAMD1A-211ENST00000599564 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
GRAMD1A-211ENST00000599564 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
GRAMD1A-211ENST00000599564 NINLQ9Y2I6 1382 aa21.22■□□□□ 0.99
GRAMD1A-211ENST00000599564 HSCBQ8IWL3 235 aa21.22■□□□□ 0.99
GRAMD1A-211ENST00000599564 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
GRAMD1A-211ENST00000599564 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
GRAMD1A-211ENST00000599564 DDX11L8A8MPP1 907 aa21.21■□□□□ 0.99
GRAMD1A-211ENST00000599564 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
GRAMD1A-211ENST00000599564 ZNF692Q9BU19 519 aaPredicted RBP21.21■□□□□ 0.99
GRAMD1A-211ENST00000599564 FOXD4L1Q9NU39 408 aa21.21■□□□□ 0.99
GRAMD1A-211ENST00000599564 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
GRAMD1A-211ENST00000599564 NUP160Q12769 1436 aa21.19■□□□□ 0.98
GRAMD1A-211ENST00000599564 CARD14Q9BXL6 1004 aa21.19■□□□□ 0.98
GRAMD1A-211ENST00000599564 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
GRAMD1A-211ENST00000599564 ATP10BO94823 1461 aa21.18■□□□□ 0.98
GRAMD1A-211ENST00000599564 SYNMO15061 1565 aa21.18■□□□□ 0.98
GRAMD1A-211ENST00000599564 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
GRAMD1A-211ENST00000599564 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
GRAMD1A-211ENST00000599564 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
GRAMD1A-211ENST00000599564 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
GRAMD1A-211ENST00000599564 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
GRAMD1A-211ENST00000599564 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
GRAMD1A-211ENST00000599564 FTSJ3Q8IY81 847 aaKnown RBP21.14■□□□□ 0.97
GRAMD1A-211ENST00000599564 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.97
GRAMD1A-211ENST00000599564 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.97
GRAMD1A-211ENST00000599564 MVPQ14764 893 aaKnown RBP21.13■□□□□ 0.97
GRAMD1A-211ENST00000599564 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
GRAMD1A-211ENST00000599564 MYOM1P52179 1685 aa21.12■□□□□ 0.97
GRAMD1A-211ENST00000599564 RBM10P98175 930 aaKnown RBP21.12■□□□□ 0.97
GRAMD1A-211ENST00000599564 NPC1L1Q9UHC9 1359 aa21.11■□□□□ 0.97
GRAMD1A-211ENST00000599564 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
GRAMD1A-211ENST00000599564 CARMIL2Q6F5E8 1435 aa21.1■□□□□ 0.97
GRAMD1A-211ENST00000599564 SCAF11Q99590 1463 aaKnown RBP21.1■□□□□ 0.97
GRAMD1A-211ENST00000599564 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
GRAMD1A-211ENST00000599564 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
GRAMD1A-211ENST00000599564 ABCA8O94911 1581 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms