RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 UNC13BO14795 1591 aa32.75■■■□□ 2.83
PNKP-212ENST00000599454 SLC26A8Q96RN1 970 aa32.74■■■□□ 2.83
PNKP-212ENST00000599454 PROSER2Q86WR7 435 aaPredicted RBP32.71■■■□□ 2.83
PNKP-212ENST00000599454 CHD2O14647 1828 aaKnown RBP32.7■■■□□ 2.82
PNKP-212ENST00000599454 TMEM131LA2VDJ0 1609 aa32.69■■■□□ 2.82
PNKP-212ENST00000599454 ZFYVE9O95405 1425 aa32.69■■■□□ 2.82
PNKP-212ENST00000599454 HDGFP51858 240 aaKnown RBP32.68■■■□□ 2.82
PNKP-212ENST00000599454 ROBO1Q9Y6N7 1651 aa32.68■■■□□ 2.82
PNKP-212ENST00000599454 BCANQ96GW7 911 aa32.67■■■□□ 2.82
PNKP-212ENST00000599454 PLEKHG1Q9ULL1 1385 aa32.67■■■□□ 2.82
PNKP-212ENST00000599454 E9PCH4 1651 aa32.65■■■□□ 2.82
PNKP-212ENST00000599454 ROCK1Q13464 1354 aa32.64■■■□□ 2.82
PNKP-212ENST00000599454 RIMS2Q9UQ26 1411 aa32.64■■■□□ 2.82
PNKP-212ENST00000599454 IQGAP3Q86VI3 1631 aa32.62■■■□□ 2.81
PNKP-212ENST00000599454 MSH6P52701 1360 aa32.61■■■□□ 2.81
PNKP-212ENST00000599454 PPP1R15AO75807 674 aaPredicted RBP32.61■■■□□ 2.81
PNKP-212ENST00000599454 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.57■■■□□ 2.8
PNKP-212ENST00000599454 RBM33Q96EV2 1170 aaKnown RBP32.56■■■□□ 2.8
PNKP-212ENST00000599454 DIP2AQ14689 1571 aa32.54■■■□□ 2.8
PNKP-212ENST00000599454 TBX22Q9Y458 520 aa32.54■■■□□ 2.8
PNKP-212ENST00000599454 NCOA3Q9Y6Q9 1424 aa32.52■■■□□ 2.8
PNKP-212ENST00000599454 RGS17Q9UGC6 210 aaPredicted RBP32.52■■■□□ 2.8
PNKP-212ENST00000599454 PHLPP1O60346 1717 aa32.51■■■□□ 2.79
PNKP-212ENST00000599454 CHGAP10645 457 aaKnown RBP32.5■■■□□ 2.79
PNKP-212ENST00000599454 SLAIN2Q9P270 581 aa32.49■■■□□ 2.79
PNKP-212ENST00000599454 PIK3R4Q99570 1358 aa32.47■■■□□ 2.79
PNKP-212ENST00000599454 NUP155O75694 1391 aa32.46■■■□□ 2.79
PNKP-212ENST00000599454 ADAMTS13Q76LX8 1427 aa32.46■■■□□ 2.79
PNKP-212ENST00000599454 TRPM2O94759 1503 aa32.41■■■□□ 2.78
PNKP-212ENST00000599454 SPHKAPQ2M3C7 1700 aa32.4■■■□□ 2.78
PNKP-212ENST00000599454 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.4■■■□□ 2.78
PNKP-212ENST00000599454 JCADQ9P266 1359 aa32.39■■■□□ 2.78
PNKP-212ENST00000599454 COL16A1Q07092 1604 aaPredicted RBP32.37■■■□□ 2.77
PNKP-212ENST00000599454 NUTM2DQ5VT03 806 aaPredicted RBP32.37■■■□□ 2.77
PNKP-212ENST00000599454 C14orf37Q86TY3 774 aa32.36■■■□□ 2.77
PNKP-212ENST00000599454 ITGAEP38570 1179 aa32.35■■■□□ 2.77
PNKP-212ENST00000599454 CADPS2Q86UW7 1296 aa32.35■■■□□ 2.77
PNKP-212ENST00000599454 C19orf44Q9H6X5 657 aa32.34■■■□□ 2.77
PNKP-212ENST00000599454 POTEAQ6S8J7 498 aa32.32■■■□□ 2.76
PNKP-212ENST00000599454 AHDC1Q5TGY3 1603 aaPredicted RBP32.3■■■□□ 2.76
PNKP-212ENST00000599454 ATF3P18847 181 aa32.3■■■□□ 2.76
PNKP-212ENST00000599454 SETBP1Q9Y6X0 1596 aa32.3■■■□□ 2.76
PNKP-212ENST00000599454 NRXN3Q9Y4C0 1643 aa32.29■■■□□ 2.76
PNKP-212ENST00000599454 AMOTL2Q9Y2J4 779 aa32.28■■■□□ 2.76
PNKP-212ENST00000599454 XRN1Q8IZH2 1706 aaKnown RBP32.28■■■□□ 2.76
PNKP-212ENST00000599454 PTPRUQ92729 1446 aa32.26■■■□□ 2.76
PNKP-212ENST00000599454 SHPRHQ149N8 1683 aa32.25■■■□□ 2.75
PNKP-212ENST00000599454 DCCP43146 1447 aa32.25■■■□□ 2.75
PNKP-212ENST00000599454 SPATA31A6Q5VVP1 1343 aa32.24■■■□□ 2.75
PNKP-212ENST00000599454 KIF1BO60333 1816 aa32.22■■■□□ 2.75
PNKP-212ENST00000599454 ZNF326Q5BKZ1 582 aaKnown RBP32.2■■■□□ 2.75
PNKP-212ENST00000599454 PPARGC1BQ86YN6 1023 aaKnown RBP32.19■■■□□ 2.74
PNKP-212ENST00000599454 CLTCL1P53675 1640 aa32.18■■■□□ 2.74
PNKP-212ENST00000599454 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
PNKP-212ENST00000599454 LRP6O75581 1613 aa32.16■■■□□ 2.74
PNKP-212ENST00000599454 NEXMIFQ5QGS0 1516 aa32.16■■■□□ 2.74
PNKP-212ENST00000599454 BRINP3Q76B58 766 aa32.14■■■□□ 2.74
PNKP-212ENST00000599454 SETD1AO15047 1707 aaKnown RBP32.13■■■□□ 2.73
PNKP-212ENST00000599454 ASXL1Q8IXJ9 1541 aa32.11■■■□□ 2.73
PNKP-212ENST00000599454 METP08581 1390 aa32.11■■■□□ 2.73
PNKP-212ENST00000599454 MEX3CQ5U5Q3 659 aaKnown RBP32.11■■■□□ 2.73
PNKP-212ENST00000599454 NHSL1Q5SYE7 1610 aa32.11■■■□□ 2.73
PNKP-212ENST00000599454 NAIPQ13075 1403 aa32.1■■■□□ 2.73
PNKP-212ENST00000599454 ZNF772Q68DY9 489 aaPredicted RBP32.09■■■□□ 2.73
PNKP-212ENST00000599454 MST1RQ04912 1400 aa32.09■■■□□ 2.73
PNKP-212ENST00000599454 ADGRL3Q9HAR2 1447 aa32.07■■■□□ 2.72
PNKP-212ENST00000599454 NALCNQ8IZF0 1738 aa32.06■■■□□ 2.72
PNKP-212ENST00000599454 SETD5Q9C0A6 1442 aa32.05■■■□□ 2.72
PNKP-212ENST00000599454 HFM1A2PYH4 1435 aa31.99■■■□□ 2.71
PNKP-212ENST00000599454 VGFO15240 615 aaPredicted RBP31.97■■■□□ 2.71
PNKP-212ENST00000599454 LRRC59Q96AG4 307 aaKnown RBP31.97■■■□□ 2.71
PNKP-212ENST00000599454 PTCH1Q13635 1447 aa31.97■■■□□ 2.71
PNKP-212ENST00000599454 PPLO60437 1756 aa31.95■■■□□ 2.71
PNKP-212ENST00000599454 RPGRIP1LQ68CZ1 1315 aa31.95■■■□□ 2.7
PNKP-212ENST00000599454 TRIM52Q96A61 297 aa31.94■■■□□ 2.7
PNKP-212ENST00000599454 NUTM2BA6NNL0 878 aaPredicted RBP31.93■■■□□ 2.7
PNKP-212ENST00000599454 NUTM2EB1AL46 878 aaPredicted RBP31.93■■■□□ 2.7
PNKP-212ENST00000599454 NUTM2AQ8IVF1 878 aaPredicted RBP31.93■■■□□ 2.7
PNKP-212ENST00000599454 PRAG1Q86YV5 1406 aa31.92■■■□□ 2.7
PNKP-212ENST00000599454 LAMC1P11047 1609 aa31.92■■■□□ 2.7
PNKP-212ENST00000599454 CDK12Q9NYV4 1490 aaPredicted RBP31.9■■■□□ 2.7
PNKP-212ENST00000599454 RXRBP28702 533 aa31.89■■■□□ 2.7
PNKP-212ENST00000599454 SLC4A1APQ9BWU0 796 aaKnown RBP31.89■■■□□ 2.7
PNKP-212ENST00000599454 C1orf167Q5SNV9 1468 aa31.89■■■□□ 2.7
PNKP-212ENST00000599454 PNPLA6Q8IY17 1366 aa31.87■■■□□ 2.69
PNKP-212ENST00000599454 AFF2P51816 1311 aa31.86■■■□□ 2.69
PNKP-212ENST00000599454 ROBO2Q9HCK4 1378 aa31.85■■■□□ 2.69
PNKP-212ENST00000599454 DDX17Q92841 729 aaKnown RBP31.82■■■□□ 2.68
PNKP-212ENST00000599454 UPF1Q92900 1129 aaKnown RBP eCLIP31.81■■■□□ 2.68
PNKP-212ENST00000599454 C8orf37Q96NL8 207 aa31.77■■■□□ 2.68
PNKP-212ENST00000599454 SOS2Q07890 1332 aaPredicted RBP31.76■■■□□ 2.68
PNKP-212ENST00000599454 CDC42BPGQ6DT37 1551 aa31.74■■■□□ 2.67
PNKP-212ENST00000599454 IFT172Q9UG01 1749 aa31.74■■■□□ 2.67
PNKP-212ENST00000599454 ORAI2Q96SN7 254 aa31.73■■■□□ 2.67
PNKP-212ENST00000599454 CCDC144AA2RUR9 1427 aa31.73■■■□□ 2.67
PNKP-212ENST00000599454 RBM6P78332 1123 aaKnown RBP31.72■■■□□ 2.67
PNKP-212ENST00000599454 QTRT2Q9H974 415 aaKnown RBP31.71■■■□□ 2.67
PNKP-212ENST00000599454 COL22A1Q8NFW1 1626 aaPredicted RBP31.71■■■□□ 2.67
PNKP-212ENST00000599454 NGLY1Q96IV0 654 aa31.68■■■□□ 2.66
PNKP-212ENST00000599454 ANKRD30BQ9BXX2 1392 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms