RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 APPP05067 770 aa14.45□□□□□ -0.1
SCN8A-208ENST00000599343 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
SCN8A-208ENST00000599343 TCEAL9Q9UHQ7 104 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 CHMP4CQ96CF2 233 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 VPS37CA5D8V6 355 aaPredicted RBP14.44□□□□□ -0.1
SCN8A-208ENST00000599343 TEX35Q5T0J7 233 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 RUFY2Q8WXA3 655 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 ZKSCAN1P17029 563 aaPredicted RBP14.44□□□□□ -0.1
SCN8A-208ENST00000599343 C9orf78Q9NZ63 289 aaPredicted RBP14.44□□□□□ -0.1
SCN8A-208ENST00000599343 CPLX1O14810 134 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 REC8O95072 547 aa14.44□□□□□ -0.1
SCN8A-208ENST00000599343 CPLX2Q6PUV4 134 aaKnown RBP14.43□□□□□ -0.1
SCN8A-208ENST00000599343 APAF1O14727 1248 aa14.43□□□□□ -0.1
SCN8A-208ENST00000599343 IFIT2P09913 472 aaKnown RBP14.43□□□□□ -0.1
SCN8A-208ENST00000599343 COG3Q96JB2 828 aa14.43□□□□□ -0.1
SCN8A-208ENST00000599343 DHX16O60231 1041 aaKnown RBP14.42□□□□□ -0.1
SCN8A-208ENST00000599343 ANKRD20A12PQ8NF67 263 aa14.42□□□□□ -0.1
SCN8A-208ENST00000599343 CHMP5Q9NZZ3 219 aa14.42□□□□□ -0.1
SCN8A-208ENST00000599343 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
SCN8A-208ENST00000599343 TEFQ10587 303 aa14.41□□□□□ -0.1
SCN8A-208ENST00000599343 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
SCN8A-208ENST00000599343 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
SCN8A-208ENST00000599343 SASS6Q6UVJ0 657 aa14.41□□□□□ -0.1
SCN8A-208ENST00000599343 NFXL1Q6ZNB6 911 aa14.41□□□□□ -0.1
SCN8A-208ENST00000599343 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 NEXNQ0ZGT2 675 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 PRKRIP1Q9H875 184 aaPredicted RBP14.4□□□□□ -0.1
SCN8A-208ENST00000599343 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 AMOTL1Q8IY63 956 aa14.4□□□□□ -0.1
SCN8A-208ENST00000599343 NOL10Q9BSC4 688 aaKnown RBP14.4□□□□□ -0.1
SCN8A-208ENST00000599343 NAP1L1P55209 391 aaKnown RBP14.4□□□□□ -0.1
SCN8A-208ENST00000599343 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
SCN8A-208ENST00000599343 SMC3Q9UQE7 1217 aa14.4□□□□□ -0.11
SCN8A-208ENST00000599343 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
SCN8A-208ENST00000599343 LRRFIP1Q32MZ4 808 aaKnown RBP14.39□□□□□ -0.11
SCN8A-208ENST00000599343 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
SCN8A-208ENST00000599343 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
SCN8A-208ENST00000599343 MSH5O43196 834 aa14.38□□□□□ -0.11
SCN8A-208ENST00000599343 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
SCN8A-208ENST00000599343 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
SCN8A-208ENST00000599343 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
SCN8A-208ENST00000599343 MNS1Q8NEH6 495 aa14.38□□□□□ -0.11
SCN8A-208ENST00000599343 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
SCN8A-208ENST00000599343 MINK1Q8N4C8 1332 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-208ENST00000599343 EVA1CP58658 441 aa14.37□□□□□ -0.11
SCN8A-208ENST00000599343 TRDNQ13061 729 aa14.37□□□□□ -0.11
SCN8A-208ENST00000599343 RIPK4P57078 832 aa14.37□□□□□ -0.11
SCN8A-208ENST00000599343 RRP12Q5JTH9 1297 aaKnown RBP14.37□□□□□ -0.11
SCN8A-208ENST00000599343 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
SCN8A-208ENST00000599343 RNF20Q5VTR2 975 aa14.36□□□□□ -0.11
SCN8A-208ENST00000599343 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
SCN8A-208ENST00000599343 R3HCC1Q9Y3T6 440 aaKnown RBP14.36□□□□□ -0.11
SCN8A-208ENST00000599343 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
SCN8A-208ENST00000599343 KDM4AO75164 1064 aa14.36□□□□□ -0.11
SCN8A-208ENST00000599343 VPS37DQ86XT2 251 aa14.35□□□□□ -0.11
SCN8A-208ENST00000599343 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
SCN8A-208ENST00000599343 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCN8A-208ENST00000599343 FKBP5Q13451 457 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-208ENST00000599343 INTS3Q68E01 1043 aaKnown RBP14.35□□□□□ -0.11
SCN8A-208ENST00000599343 AK7Q96M32 723 aa14.35□□□□□ -0.11
SCN8A-208ENST00000599343 EVC2Q86UK5 1308 aa14.35□□□□□ -0.11
SCN8A-208ENST00000599343 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
SCN8A-208ENST00000599343 CALRP27797 417 aaKnown RBP14.35□□□□□ -0.11
SCN8A-208ENST00000599343 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-208ENST00000599343 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 USP47Q96K76 1375 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
SCN8A-208ENST00000599343 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 ERICH2A1L162 156 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
SCN8A-208ENST00000599343 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-208ENST00000599343 NUCB2P80303 420 aa14.34□□□□□ -0.11
SCN8A-208ENST00000599343 RNF214Q8ND24 703 aa14.33□□□□□ -0.12
SCN8A-208ENST00000599343 TTLL5Q6EMB2 1281 aa14.32□□□□□ -0.12
SCN8A-208ENST00000599343 NFKBIBQ15653 356 aa14.32□□□□□ -0.12
SCN8A-208ENST00000599343 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCN8A-208ENST00000599343 SYTL4Q96C24 671 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-208ENST00000599343 CT47A1Q5JQC4 288 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-208ENST00000599343 CCDC43Q96MW1 224 aaKnown RBP14.32□□□□□ -0.12
SCN8A-208ENST00000599343 FYB1O15117 783 aa14.31□□□□□ -0.12
SCN8A-208ENST00000599343 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
SCN8A-208ENST00000599343 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
SCN8A-208ENST00000599343 ACBD3Q9H3P7 528 aa14.31□□□□□ -0.12
SCN8A-208ENST00000599343 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-208ENST00000599343 SAFBQ15424 915 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCN8A-208ENST00000599343 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
SCN8A-208ENST00000599343 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 CDR1P51861 262 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 CCDC39Q9UFE4 941 aa14.3□□□□□ -0.12
SCN8A-208ENST00000599343 SKIDA1Q1XH10 827 aa14.29□□□□□ -0.12
SCN8A-208ENST00000599343 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
SCN8A-208ENST00000599343 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
SCN8A-208ENST00000599343 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms