RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 MED1Q15648 1581 aaPredicted RBP34.96■■■■□ 3.19
CCDC61-207ENST00000599044 RRBP1Q9P2E9 1410 aaKnown RBP34.93■■■■□ 3.18
CCDC61-207ENST00000599044 TMEM131LA2VDJ0 1609 aa34.92■■■■□ 3.18
CCDC61-207ENST00000599044 ZFYVE9O95405 1425 aa34.92■■■■□ 3.18
CCDC61-207ENST00000599044 MYO5BQ9ULV0 1848 aa34.91■■■■□ 3.18
CCDC61-207ENST00000599044 CHGAP10645 457 aaKnown RBP34.89■■■■□ 3.18
CCDC61-207ENST00000599044 RIMS2Q9UQ26 1411 aa34.89■■■■□ 3.18
CCDC61-207ENST00000599044 KCNA6P17658 529 aa34.88■■■■□ 3.17
CCDC61-207ENST00000599044 BCANQ96GW7 911 aa34.87■■■■□ 3.17
CCDC61-207ENST00000599044 RBM33Q96EV2 1170 aaKnown RBP34.85■■■■□ 3.17
CCDC61-207ENST00000599044 NUTM2DQ5VT03 806 aaPredicted RBP34.83■■■■□ 3.17
CCDC61-207ENST00000599044 TMEM94Q12767 1356 aa34.82■■■■□ 3.16
CCDC61-207ENST00000599044 PLEKHG1Q9ULL1 1385 aa34.82■■■■□ 3.16
CCDC61-207ENST00000599044 PPP1R15AO75807 674 aaPredicted RBP34.8■■■■□ 3.16
CCDC61-207ENST00000599044 PROSER2Q86WR7 435 aaPredicted RBP34.78■■■■□ 3.16
CCDC61-207ENST00000599044 NAIPQ13075 1403 aa34.78■■■■□ 3.16
CCDC61-207ENST00000599044 HDGFP51858 240 aaKnown RBP34.77■■■■□ 3.16
CCDC61-207ENST00000599044 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.74■■■■□ 3.15
CCDC61-207ENST00000599044 NWD1Q149M9 1564 aa34.74■■■■□ 3.15
CCDC61-207ENST00000599044 TBX22Q9Y458 520 aa34.7■■■■□ 3.15
CCDC61-207ENST00000599044 ADAMTS13Q76LX8 1427 aa34.69■■■■□ 3.14
CCDC61-207ENST00000599044 NKTRP30414 1462 aaKnown RBP34.69■■■■□ 3.14
CCDC61-207ENST00000599044 CHD2O14647 1828 aaKnown RBP34.66■■■■□ 3.14
CCDC61-207ENST00000599044 SPHKAPQ2M3C7 1700 aa34.66■■■■□ 3.14
CCDC61-207ENST00000599044 HFM1A2PYH4 1435 aa34.62■■■■□ 3.13
CCDC61-207ENST00000599044 FAM135BQ49AJ0 1406 aa34.61■■■■□ 3.13
CCDC61-207ENST00000599044 ROBO1Q9Y6N7 1651 aa34.59■■■■□ 3.13
CCDC61-207ENST00000599044 TRIM52Q96A61 297 aa34.58■■■■□ 3.13
CCDC61-207ENST00000599044 CLTCL1P53675 1640 aa34.57■■■■□ 3.12
CCDC61-207ENST00000599044 ZNF326Q5BKZ1 582 aaKnown RBP34.56■■■■□ 3.12
CCDC61-207ENST00000599044 MSH6P52701 1360 aa34.55■■■■□ 3.12
CCDC61-207ENST00000599044 DIP2AQ14689 1571 aa34.54■■■■□ 3.12
CCDC61-207ENST00000599044 PTPRUQ92729 1446 aa34.54■■■■□ 3.12
CCDC61-207ENST00000599044 TRPM2O94759 1503 aa34.53■■■■□ 3.12
CCDC61-207ENST00000599044 PHF23Q9BUL5 403 aaPredicted RBP34.52■■■■□ 3.12
CCDC61-207ENST00000599044 PIK3R4Q99570 1358 aa34.51■■■■□ 3.12
CCDC61-207ENST00000599044 SLAIN2Q9P270 581 aa34.5■■■■□ 3.11
CCDC61-207ENST00000599044 AMOTL2Q9Y2J4 779 aa34.5■■■■□ 3.11
CCDC61-207ENST00000599044 NRXN3Q9Y4C0 1643 aa34.5■■■■□ 3.11
CCDC61-207ENST00000599044 SLC4A1APQ9BWU0 796 aaKnown RBP34.47■■■■□ 3.11
CCDC61-207ENST00000599044 SETBP1Q9Y6X0 1596 aa34.45■■■■□ 3.11
CCDC61-207ENST00000599044 NCOA3Q9Y6Q9 1424 aa34.45■■■■□ 3.11
CCDC61-207ENST00000599044 NEXMIFQ5QGS0 1516 aa34.45■■■■□ 3.1
CCDC61-207ENST00000599044 C14orf37Q86TY3 774 aa34.43■■■■□ 3.1
CCDC61-207ENST00000599044 METP08581 1390 aa34.43■■■■□ 3.1
CCDC61-207ENST00000599044 FOXD1Q16676 465 aa34.41■■■■□ 3.1
CCDC61-207ENST00000599044 PHLPP1O60346 1717 aa34.4■■■■□ 3.1
CCDC61-207ENST00000599044 C19orf44Q9H6X5 657 aa34.38■■■■□ 3.09
CCDC61-207ENST00000599044 KIF1BO60333 1816 aa34.37■■■■□ 3.09
CCDC61-207ENST00000599044 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.36■■■■□ 3.09
CCDC61-207ENST00000599044 XRN1Q8IZH2 1706 aaKnown RBP34.35■■■■□ 3.09
CCDC61-207ENST00000599044 RGS17Q9UGC6 210 aaPredicted RBP34.33■■■■□ 3.09
CCDC61-207ENST00000599044 CADPS2Q86UW7 1296 aa34.32■■■■□ 3.08
CCDC61-207ENST00000599044 ATF3P18847 181 aa34.31■■■■□ 3.08
CCDC61-207ENST00000599044 COL16A1Q07092 1604 aaPredicted RBP34.28■■■■□ 3.08
CCDC61-207ENST00000599044 MPHOSPH9Q99550 1183 aa34.27■■■■□ 3.08
CCDC61-207ENST00000599044 VGFO15240 615 aaPredicted RBP34.26■■■■□ 3.08
CCDC61-207ENST00000599044 RPGRIP1LQ68CZ1 1315 aa34.23■■■■□ 3.07
CCDC61-207ENST00000599044 BRINP3Q76B58 766 aa34.2■■■■□ 3.07
CCDC61-207ENST00000599044 AHDC1Q5TGY3 1603 aaPredicted RBP34.19■■■■□ 3.06
CCDC61-207ENST00000599044 SETD1AO15047 1707 aaKnown RBP34.18■■■■□ 3.06
CCDC61-207ENST00000599044 JCADQ9P266 1359 aa34.18■■■■□ 3.06
CCDC61-207ENST00000599044 DCCP43146 1447 aa34.18■■■■□ 3.06
CCDC61-207ENST00000599044 PPLO60437 1756 aa34.16■■■■□ 3.06
CCDC61-207ENST00000599044 CCDC144AA2RUR9 1427 aa34.15■■■■□ 3.06
CCDC61-207ENST00000599044 MST1RQ04912 1400 aa34.15■■■■□ 3.06
CCDC61-207ENST00000599044 RGL3Q3MIN7 710 aa34.15■■■■□ 3.06
CCDC61-207ENST00000599044 SETD5Q9C0A6 1442 aa34.13■■■■□ 3.05
CCDC61-207ENST00000599044 ADGRL3Q9HAR2 1447 aa34.13■■■■□ 3.05
CCDC61-207ENST00000599044 ROBO2Q9HCK4 1378 aa34.13■■■■□ 3.05
CCDC61-207ENST00000599044 SHPRHQ149N8 1683 aa34.13■■■■□ 3.05
CCDC61-207ENST00000599044 SPATA31E1Q6ZUB1 1445 aa34.13■■■■□ 3.05
CCDC61-207ENST00000599044 ADGRF5Q8IZF2 1346 aa34.12■■■■□ 3.05
CCDC61-207ENST00000599044 POTEAQ6S8J7 498 aa34.11■■■■□ 3.05
CCDC61-207ENST00000599044 NALCNQ8IZF0 1738 aa34.1■■■■□ 3.05
CCDC61-207ENST00000599044 ASXL1Q8IXJ9 1541 aa34.09■■■■□ 3.05
CCDC61-207ENST00000599044 PTCH1Q13635 1447 aa34.07■■■■□ 3.04
CCDC61-207ENST00000599044 DDX17Q92841 729 aaKnown RBP34.05■■■■□ 3.04
CCDC61-207ENST00000599044 LRP6O75581 1613 aa34.04■■■■□ 3.04
CCDC61-207ENST00000599044 RAB3GAP2Q9H2M9 1393 aa34.03■■■■□ 3.04
CCDC61-207ENST00000599044 NHSL1Q5SYE7 1610 aa34.03■■■■□ 3.04
CCDC61-207ENST00000599044 PRAG1Q86YV5 1406 aa34.02■■■■□ 3.04
CCDC61-207ENST00000599044 SPATA31A6Q5VVP1 1343 aa34.01■■■■□ 3.03
CCDC61-207ENST00000599044 IFT172Q9UG01 1749 aa33.99■■■■□ 3.03
CCDC61-207ENST00000599044 ANKRD30BQ9BXX2 1392 aa33.98■■■■□ 3.03
CCDC61-207ENST00000599044 C1orf167Q5SNV9 1468 aa33.97■■■■□ 3.03
CCDC61-207ENST00000599044 TMEM132EQ6IEE7 984 aa33.95■■■■□ 3.03
CCDC61-207ENST00000599044 STK26Q9P289 416 aa33.95■■■■□ 3.03
CCDC61-207ENST00000599044 ACIN1Q9UKV3 1341 aaKnown RBP33.95■■■■□ 3.03
CCDC61-207ENST00000599044 ORAI2Q96SN7 254 aa33.94■■■■□ 3.02
CCDC61-207ENST00000599044 NUTM2BA6NNL0 878 aaPredicted RBP33.92■■■■□ 3.02
CCDC61-207ENST00000599044 NUTM2EB1AL46 878 aaPredicted RBP33.92■■■■□ 3.02
CCDC61-207ENST00000599044 NUTM2AQ8IVF1 878 aaPredicted RBP33.92■■■■□ 3.02
CCDC61-207ENST00000599044 PIK3C2GO75747 1445 aa33.92■■■■□ 3.02
CCDC61-207ENST00000599044 MEX3CQ5U5Q3 659 aaKnown RBP33.9■■■■□ 3.02
CCDC61-207ENST00000599044 WAPLQ7Z5K2 1190 aa33.9■■■■□ 3.02
CCDC61-207ENST00000599044 LRRC59Q96AG4 307 aaKnown RBP33.89■■■■□ 3.02
CCDC61-207ENST00000599044 LRPPRCP42704 1394 aaKnown RBP33.87■■■■□ 3.01
CCDC61-207ENST00000599044 TECPR2O15040 1411 aa33.85■■■■□ 3.01
CCDC61-207ENST00000599044 PLEKHH1Q9ULM0 1364 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms