RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 CADPS2Q86UW7 1296 aa7.41□□□□□ -1.22
HERC3-213ENST00000598772 DDX17Q92841 729 aaKnown RBP7.41□□□□□ -1.22
HERC3-213ENST00000598772 CEP350Q5VT06 3117 aa7.41□□□□□ -1.22
HERC3-213ENST00000598772 CDC42BPBQ9Y5S2 1711 aa7.41□□□□□ -1.22
HERC3-213ENST00000598772 BAG6P46379 1132 aa7.4□□□□□ -1.22
HERC3-213ENST00000598772 ZC3H13Q5T200 1668 aaKnown RBP7.4□□□□□ -1.23
HERC3-213ENST00000598772 SHPRHQ149N8 1683 aa7.39□□□□□ -1.23
HERC3-213ENST00000598772 MAP3K1Q13233 1512 aa7.39□□□□□ -1.23
HERC3-213ENST00000598772 BRINP3Q76B58 766 aa7.39□□□□□ -1.23
HERC3-213ENST00000598772 CFDP1Q9UEE9 299 aaPredicted RBP7.39□□□□□ -1.23
HERC3-213ENST00000598772 CFAP65Q6ZU64 1925 aaKnown RBP7.39□□□□□ -1.23
HERC3-213ENST00000598772 SYCP2Q9BX26 1530 aa7.38□□□□□ -1.23
HERC3-213ENST00000598772 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
HERC3-213ENST00000598772 NWD1Q149M9 1564 aa7.37□□□□□ -1.23
HERC3-213ENST00000598772 PRDM15P57071 1507 aaPredicted RBP7.37□□□□□ -1.23
HERC3-213ENST00000598772 A0A0G2JS52 829 aa7.37□□□□□ -1.23
HERC3-213ENST00000598772 MYT1Q01538 1121 aa7.37□□□□□ -1.23
HERC3-213ENST00000598772 GJD4Q96KN9 370 aaPredicted RBP7.37□□□□□ -1.23
HERC3-213ENST00000598772 C19orf44Q9H6X5 657 aa7.37□□□□□ -1.23
HERC3-213ENST00000598772 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
HERC3-213ENST00000598772 DHX29Q7Z478 1369 aaKnown RBP7.36□□□□□ -1.23
HERC3-213ENST00000598772 GIGYF1O75420 1035 aaPredicted RBP7.36□□□□□ -1.23
HERC3-213ENST00000598772 CSRNP3Q8WYN3 585 aa7.36□□□□□ -1.23
HERC3-213ENST00000598772 PLXNC1O60486 1568 aa7.36□□□□□ -1.23
HERC3-213ENST00000598772 NHSL1Q5SYE7 1610 aa7.35□□□□□ -1.23
HERC3-213ENST00000598772 CCDC9Q9Y3X0 531 aaKnown RBP7.35□□□□□ -1.23
HERC3-213ENST00000598772 TIAM1Q13009 1591 aa7.34□□□□□ -1.23
HERC3-213ENST00000598772 ZNF644Q9H582 1327 aaPredicted RBP7.34□□□□□ -1.23
HERC3-213ENST00000598772 PPP1R15AO75807 674 aaPredicted RBP7.34□□□□□ -1.23
HERC3-213ENST00000598772 SEPT12Q8IYM1 358 aa7.34□□□□□ -1.23
HERC3-213ENST00000598772 FNBP4Q8N3X1 1017 aaPredicted RBP7.34□□□□□ -1.23
HERC3-213ENST00000598772 AHDC1Q5TGY3 1603 aaPredicted RBP7.34□□□□□ -1.24
HERC3-213ENST00000598772 PREX2Q70Z35 1606 aa7.34□□□□□ -1.24
HERC3-213ENST00000598772 PNPLA6Q8IY17 1366 aa7.33□□□□□ -1.24
HERC3-213ENST00000598772 ATRNO75882 1429 aa7.33□□□□□ -1.24
HERC3-213ENST00000598772 TMEM2Q9UHN6 1383 aa7.33□□□□□ -1.24
HERC3-213ENST00000598772 KRT27Q7Z3Y8 459 aa7.32□□□□□ -1.24
HERC3-213ENST00000598772 ABCC3O15438 1527 aa7.32□□□□□ -1.24
HERC3-213ENST00000598772 ADGBQ8N7X0 1667 aa7.32□□□□□ -1.24
HERC3-213ENST00000598772 BCL9LQ86UU0 1499 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 DIP2AQ14689 1571 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 UBR1Q8IWV7 1749 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 SETD5Q9C0A6 1442 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 SPON1Q9HCB6 807 aa7.31□□□□□ -1.24
HERC3-213ENST00000598772 KDM5AP29375 1690 aaKnown RBP7.31□□□□□ -1.24
HERC3-213ENST00000598772 NKTRP30414 1462 aaKnown RBP7.3□□□□□ -1.24
HERC3-213ENST00000598772 ERVK-7P63135 1459 aa7.3□□□□□ -1.24
HERC3-213ENST00000598772 ARHGAP23Q9P227 1491 aa7.3□□□□□ -1.24
HERC3-213ENST00000598772 UBTFP17480 764 aaKnown RBP7.3□□□□□ -1.24
HERC3-213ENST00000598772 EZH2Q15910 746 aaKnown RBP7.3□□□□□ -1.24
HERC3-213ENST00000598772 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
HERC3-213ENST00000598772 INO80Q9ULG1 1556 aaPredicted RBP7.29□□□□□ -1.24
HERC3-213ENST00000598772 FMN1Q68DA7 1419 aa7.29□□□□□ -1.24
HERC3-213ENST00000598772 SLIT1O75093 1534 aa7.29□□□□□ -1.24
HERC3-213ENST00000598772 SLC34A2O95436 690 aa7.29□□□□□ -1.24
HERC3-213ENST00000598772 CCNB3Q8WWL7 1395 aa7.29□□□□□ -1.24
HERC3-213ENST00000598772 RTEL1-TNFRSF6BF6WH68 1400 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 KIAA1107Q9UPP5 1409 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 CDC42BPAQ5VT25 1732 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 KCNQ2O43526 872 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 IDI1Q13907 227 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 PLEKHH2Q8IVE3 1493 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 MAST1Q9Y2H9 1570 aa7.28□□□□□ -1.24
HERC3-213ENST00000598772 POTEMA6NI47 508 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 APLP2Q06481 763 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 NBPF8Q3BBV2 869 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 NBPF14Q5TI25 921 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 UNC5CLQ8IV45 518 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 ZNF219Q9P2Y4 722 aaPredicted RBP7.27□□□□□ -1.25
HERC3-213ENST00000598772 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.27□□□□□ -1.25
HERC3-213ENST00000598772 ASXL1Q8IXJ9 1541 aa7.27□□□□□ -1.25
HERC3-213ENST00000598772 GPATCH8Q9UKJ3 1502 aaKnown RBP7.27□□□□□ -1.25
HERC3-213ENST00000598772 TSPY4P0CV99 314 aa7.26□□□□□ -1.25
HERC3-213ENST00000598772 TSPY10P0CW01 314 aa7.26□□□□□ -1.25
HERC3-213ENST00000598772 CHGAP10645 457 aaKnown RBP7.26□□□□□ -1.25
HERC3-213ENST00000598772 FXR2P51116 673 aaKnown RBP eCLIP7.26□□□□□ -1.25
HERC3-213ENST00000598772 AMOTL2Q9Y2J4 779 aa7.26□□□□□ -1.25
HERC3-213ENST00000598772 CAMTA1Q9Y6Y1 1673 aa7.25□□□□□ -1.25
HERC3-213ENST00000598772 RALGAPBQ86X10 1494 aa7.25□□□□□ -1.25
HERC3-213ENST00000598772 NINLQ9Y2I6 1382 aa7.25□□□□□ -1.25
HERC3-213ENST00000598772 HDGFP51858 240 aaKnown RBP7.25□□□□□ -1.25
HERC3-213ENST00000598772 NCBP3Q53F19 620 aaKnown RBP7.25□□□□□ -1.25
HERC3-213ENST00000598772 TET3O43151 1660 aa7.25□□□□□ -1.25
HERC3-213ENST00000598772 CAMSAP2Q08AD1 1489 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 GABBR2O75899 941 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 APBA3O96018 575 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 HAP1P54257 671 aaPredicted RBP7.24□□□□□ -1.25
HERC3-213ENST00000598772 TNS4Q8IZW8 715 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 TBX22Q9Y458 520 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 PTCH1Q13635 1447 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 NCOA3Q9Y6Q9 1424 aa7.24□□□□□ -1.25
HERC3-213ENST00000598772 BRWD3Q6RI45 1802 aa7.23□□□□□ -1.25
HERC3-213ENST00000598772 TRIM37O94972 964 aa7.23□□□□□ -1.25
HERC3-213ENST00000598772 PRELPP51888 382 aa7.23□□□□□ -1.25
HERC3-213ENST00000598772 XPCQ01831 940 aaPredicted RBP7.23□□□□□ -1.25
HERC3-213ENST00000598772 COL13A1Q5TAT6 717 aaPredicted RBP7.23□□□□□ -1.25
HERC3-213ENST00000598772 PELP1Q8IZL8 1130 aaKnown RBP7.23□□□□□ -1.25
HERC3-213ENST00000598772 PCDH10Q9P2E7 1040 aa7.23□□□□□ -1.25
HERC3-213ENST00000598772 ARHGAP35Q9NRY4 1499 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms