RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-215ENST00000598444 TMEM131LA2VDJ0 1609 aa13.49□□□□□ -0.25
ARHGEF1-215ENST00000598444 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
ARHGEF1-215ENST00000598444 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
ARHGEF1-215ENST00000598444 KCNA6P17658 529 aa13.47□□□□□ -0.25
ARHGEF1-215ENST00000598444 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
ARHGEF1-215ENST00000598444 PPP1R15AO75807 674 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF1-215ENST00000598444 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF1-215ENST00000598444 RIMS2Q9UQ26 1411 aa13.46□□□□□ -0.26
ARHGEF1-215ENST00000598444 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
ARHGEF1-215ENST00000598444 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-215ENST00000598444 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
ARHGEF1-215ENST00000598444 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
ARHGEF1-215ENST00000598444 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF1-215ENST00000598444 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
ARHGEF1-215ENST00000598444 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
ARHGEF1-215ENST00000598444 TMEM94Q12767 1356 aa13.42□□□□□ -0.26
ARHGEF1-215ENST00000598444 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
ARHGEF1-215ENST00000598444 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
ARHGEF1-215ENST00000598444 NAIPQ13075 1403 aa13.39□□□□□ -0.27
ARHGEF1-215ENST00000598444 KIF1BO60333 1816 aa13.39□□□□□ -0.27
ARHGEF1-215ENST00000598444 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-215ENST00000598444 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-215ENST00000598444 SOCS7O14512 581 aa13.37□□□□□ -0.27
ARHGEF1-215ENST00000598444 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-215ENST00000598444 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
ARHGEF1-215ENST00000598444 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
ARHGEF1-215ENST00000598444 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
ARHGEF1-215ENST00000598444 MSH6P52701 1360 aa13.35□□□□□ -0.27
ARHGEF1-215ENST00000598444 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
ARHGEF1-215ENST00000598444 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
ARHGEF1-215ENST00000598444 DIP2AQ14689 1571 aa13.34□□□□□ -0.27
ARHGEF1-215ENST00000598444 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
ARHGEF1-215ENST00000598444 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
ARHGEF1-215ENST00000598444 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
ARHGEF1-215ENST00000598444 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
ARHGEF1-215ENST00000598444 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF1-215ENST00000598444 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
ARHGEF1-215ENST00000598444 TRPM2O94759 1503 aa13.32□□□□□ -0.28
ARHGEF1-215ENST00000598444 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF1-215ENST00000598444 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-215ENST00000598444 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
ARHGEF1-215ENST00000598444 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
ARHGEF1-215ENST00000598444 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
ARHGEF1-215ENST00000598444 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
ARHGEF1-215ENST00000598444 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
ARHGEF1-215ENST00000598444 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
ARHGEF1-215ENST00000598444 ATF3P18847 181 aa13.28□□□□□ -0.28
ARHGEF1-215ENST00000598444 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
ARHGEF1-215ENST00000598444 FOXD1Q16676 465 aa13.26□□□□□ -0.29
ARHGEF1-215ENST00000598444 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
ARHGEF1-215ENST00000598444 XRN1Q8IZH2 1706 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-215ENST00000598444 METP08581 1390 aa13.25□□□□□ -0.29
ARHGEF1-215ENST00000598444 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF1-215ENST00000598444 PPLO60437 1756 aa13.25□□□□□ -0.29
ARHGEF1-215ENST00000598444 RPGRIP1LQ68CZ1 1315 aa13.23□□□□□ -0.29
ARHGEF1-215ENST00000598444 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
ARHGEF1-215ENST00000598444 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF1-215ENST00000598444 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
ARHGEF1-215ENST00000598444 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF1-215ENST00000598444 JCADQ9P266 1359 aa13.2□□□□□ -0.3
ARHGEF1-215ENST00000598444 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
ARHGEF1-215ENST00000598444 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
ARHGEF1-215ENST00000598444 DCCP43146 1447 aa13.19□□□□□ -0.3
ARHGEF1-215ENST00000598444 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF1-215ENST00000598444 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
ARHGEF1-215ENST00000598444 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
ARHGEF1-215ENST00000598444 ACIN1Q9UKV3 1341 aaKnown RBP13.17□□□□□ -0.3
ARHGEF1-215ENST00000598444 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
ARHGEF1-215ENST00000598444 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
ARHGEF1-215ENST00000598444 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
ARHGEF1-215ENST00000598444 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
ARHGEF1-215ENST00000598444 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
ARHGEF1-215ENST00000598444 MST1RQ04912 1400 aa13.15□□□□□ -0.3
ARHGEF1-215ENST00000598444 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
ARHGEF1-215ENST00000598444 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
ARHGEF1-215ENST00000598444 ROBO2Q9HCK4 1378 aa13.14□□□□□ -0.31
ARHGEF1-215ENST00000598444 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
ARHGEF1-215ENST00000598444 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
ARHGEF1-215ENST00000598444 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
ARHGEF1-215ENST00000598444 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-215ENST00000598444 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
ARHGEF1-215ENST00000598444 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
ARHGEF1-215ENST00000598444 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-215ENST00000598444 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 STK26Q9P289 416 aa13.11□□□□□ -0.31
ARHGEF1-215ENST00000598444 LRP6O75581 1613 aa13.1□□□□□ -0.31
ARHGEF1-215ENST00000598444 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
ARHGEF1-215ENST00000598444 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
ARHGEF1-215ENST00000598444 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
ARHGEF1-215ENST00000598444 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
ARHGEF1-215ENST00000598444 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
ARHGEF1-215ENST00000598444 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF1-215ENST00000598444 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
ARHGEF1-215ENST00000598444 LAMC1P11047 1609 aa13.06□□□□□ -0.32
ARHGEF1-215ENST00000598444 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms