RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 IFT172Q9UG01 1749 aa16.52■□□□□ 0.24
SMIM7-216ENST00000598278 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMIM7-216ENST00000598278 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
SMIM7-216ENST00000598278 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
SMIM7-216ENST00000598278 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
SMIM7-216ENST00000598278 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
SMIM7-216ENST00000598278 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
SMIM7-216ENST00000598278 TMEM2Q9UHN6 1383 aa16.49■□□□□ 0.23
SMIM7-216ENST00000598278 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
SMIM7-216ENST00000598278 MYOM2P54296 1465 aa16.48■□□□□ 0.23
SMIM7-216ENST00000598278 SLIT1O75093 1534 aa16.47■□□□□ 0.23
SMIM7-216ENST00000598278 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
SMIM7-216ENST00000598278 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
SMIM7-216ENST00000598278 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
SMIM7-216ENST00000598278 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
SMIM7-216ENST00000598278 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
SMIM7-216ENST00000598278 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
SMIM7-216ENST00000598278 ADGRF5Q8IZF2 1346 aa16.42■□□□□ 0.22
SMIM7-216ENST00000598278 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
SMIM7-216ENST00000598278 LMTK3Q96Q04 1460 aa16.41■□□□□ 0.22
SMIM7-216ENST00000598278 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
SMIM7-216ENST00000598278 POLR1AO95602 1720 aaPredicted RBP16.4■□□□□ 0.22
SMIM7-216ENST00000598278 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
SMIM7-216ENST00000598278 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
SMIM7-216ENST00000598278 LTKP29376 864 aa16.39■□□□□ 0.21
SMIM7-216ENST00000598278 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
SMIM7-216ENST00000598278 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
SMIM7-216ENST00000598278 LAMC1P11047 1609 aa16.38■□□□□ 0.21
SMIM7-216ENST00000598278 BCANQ96GW7 911 aa16.38■□□□□ 0.21
SMIM7-216ENST00000598278 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
SMIM7-216ENST00000598278 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
SMIM7-216ENST00000598278 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
SMIM7-216ENST00000598278 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
SMIM7-216ENST00000598278 C14orf93Q9H972 538 aaKnown RBP16.35■□□□□ 0.21
SMIM7-216ENST00000598278 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
SMIM7-216ENST00000598278 HSPA2P54652 639 aa16.34■□□□□ 0.21
SMIM7-216ENST00000598278 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
SMIM7-216ENST00000598278 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
SMIM7-216ENST00000598278 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.2
SMIM7-216ENST00000598278 MED14O60244 1454 aa16.33■□□□□ 0.2
SMIM7-216ENST00000598278 DIP2AQ14689 1571 aa16.33■□□□□ 0.2
SMIM7-216ENST00000598278 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
SMIM7-216ENST00000598278 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
SMIM7-216ENST00000598278 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
SMIM7-216ENST00000598278 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
SMIM7-216ENST00000598278 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
SMIM7-216ENST00000598278 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
SMIM7-216ENST00000598278 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
SMIM7-216ENST00000598278 SETD1AO15047 1707 aaKnown RBP16.3■□□□□ 0.2
SMIM7-216ENST00000598278 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
SMIM7-216ENST00000598278 GPRASP1Q5JY77 1395 aa16.29■□□□□ 0.2
SMIM7-216ENST00000598278 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
SMIM7-216ENST00000598278 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.2
SMIM7-216ENST00000598278 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
SMIM7-216ENST00000598278 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
SMIM7-216ENST00000598278 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
SMIM7-216ENST00000598278 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
SMIM7-216ENST00000598278 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMIM7-216ENST00000598278 METP08581 1390 aa16.24■□□□□ 0.19
SMIM7-216ENST00000598278 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
SMIM7-216ENST00000598278 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
SMIM7-216ENST00000598278 YTHDC2Q9H6S0 1430 aaKnown RBP16.23■□□□□ 0.19
SMIM7-216ENST00000598278 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
SMIM7-216ENST00000598278 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
SMIM7-216ENST00000598278 USP47Q96K76 1375 aa16.22■□□□□ 0.19
SMIM7-216ENST00000598278 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
SMIM7-216ENST00000598278 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
SMIM7-216ENST00000598278 STK26Q9P289 416 aa16.2■□□□□ 0.18
SMIM7-216ENST00000598278 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
SMIM7-216ENST00000598278 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
SMIM7-216ENST00000598278 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
SMIM7-216ENST00000598278 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
SMIM7-216ENST00000598278 SIRT1Q96EB6 747 aa16.18■□□□□ 0.18
SMIM7-216ENST00000598278 AMOTL2Q9Y2J4 779 aa16.18■□□□□ 0.18
SMIM7-216ENST00000598278 TECPR2O15040 1411 aa16.18■□□□□ 0.18
SMIM7-216ENST00000598278 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
SMIM7-216ENST00000598278 KCNA6P17658 529 aa16.17■□□□□ 0.18
SMIM7-216ENST00000598278 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
SMIM7-216ENST00000598278 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
SMIM7-216ENST00000598278 CPS1P31327 1500 aa16.16■□□□□ 0.18
SMIM7-216ENST00000598278 POGKQ9P215 609 aa16.16■□□□□ 0.18
SMIM7-216ENST00000598278 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
SMIM7-216ENST00000598278 ST20-MTHFSA0A0A6YYL1 179 aa16.15■□□□□ 0.18
SMIM7-216ENST00000598278 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
SMIM7-216ENST00000598278 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
SMIM7-216ENST00000598278 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
SMIM7-216ENST00000598278 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
SMIM7-216ENST00000598278 QRICH2Q9H0J4 1663 aa16.13■□□□□ 0.17
SMIM7-216ENST00000598278 NKTRP30414 1462 aaKnown RBP16.12■□□□□ 0.17
SMIM7-216ENST00000598278 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
SMIM7-216ENST00000598278 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
SMIM7-216ENST00000598278 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
SMIM7-216ENST00000598278 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
SMIM7-216ENST00000598278 SAFB2Q14151 953 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMIM7-216ENST00000598278 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
SMIM7-216ENST00000598278 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.16
SMIM7-216ENST00000598278 TMF1P82094 1093 aa16.08■□□□□ 0.16
SMIM7-216ENST00000598278 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
SMIM7-216ENST00000598278 TESK2Q96S53 571 aa16.08■□□□□ 0.16
SMIM7-216ENST00000598278 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms