RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.59
SOX2-OT-228ENST00000597828 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
SOX2-OT-228ENST00000597828 SLC26A8Q96RN1 970 aa18.72■□□□□ 0.59
SOX2-OT-228ENST00000597828 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
SOX2-OT-228ENST00000597828 TMEM94Q12767 1356 aa18.7■□□□□ 0.58
SOX2-OT-228ENST00000597828 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
SOX2-OT-228ENST00000597828 PHLPP1O60346 1717 aa18.69■□□□□ 0.58
SOX2-OT-228ENST00000597828 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
SOX2-OT-228ENST00000597828 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
SOX2-OT-228ENST00000597828 ROCK1Q13464 1354 aa18.68■□□□□ 0.58
SOX2-OT-228ENST00000597828 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
SOX2-OT-228ENST00000597828 NRXN3Q9Y4C0 1643 aa18.66■□□□□ 0.58
SOX2-OT-228ENST00000597828 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
SOX2-OT-228ENST00000597828 KIF1BO60333 1816 aa18.65■□□□□ 0.58
SOX2-OT-228ENST00000597828 KCNA6P17658 529 aa18.65■□□□□ 0.58
SOX2-OT-228ENST00000597828 ITGAEP38570 1179 aa18.65■□□□□ 0.58
SOX2-OT-228ENST00000597828 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
SOX2-OT-228ENST00000597828 DIP2AQ14689 1571 aa18.64■□□□□ 0.58
SOX2-OT-228ENST00000597828 BCANQ96GW7 911 aa18.63■□□□□ 0.57
SOX2-OT-228ENST00000597828 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
SOX2-OT-228ENST00000597828 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
SOX2-OT-228ENST00000597828 CLTCL1P53675 1640 aa18.62■□□□□ 0.57
SOX2-OT-228ENST00000597828 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
SOX2-OT-228ENST00000597828 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
SOX2-OT-228ENST00000597828 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
SOX2-OT-228ENST00000597828 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
SOX2-OT-228ENST00000597828 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
SOX2-OT-228ENST00000597828 NUP155O75694 1391 aa18.59■□□□□ 0.57
SOX2-OT-228ENST00000597828 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
SOX2-OT-228ENST00000597828 COL16A1Q07092 1604 aaPredicted RBP18.59■□□□□ 0.57
SOX2-OT-228ENST00000597828 TRPM2O94759 1503 aa18.58■□□□□ 0.56
SOX2-OT-228ENST00000597828 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
SOX2-OT-228ENST00000597828 MSH6P52701 1360 aa18.56■□□□□ 0.56
SOX2-OT-228ENST00000597828 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
SOX2-OT-228ENST00000597828 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
SOX2-OT-228ENST00000597828 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
SOX2-OT-228ENST00000597828 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
SOX2-OT-228ENST00000597828 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
SOX2-OT-228ENST00000597828 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
SOX2-OT-228ENST00000597828 SHPRHQ149N8 1683 aa18.52■□□□□ 0.56
SOX2-OT-228ENST00000597828 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
SOX2-OT-228ENST00000597828 PPLO60437 1756 aa18.5■□□□□ 0.55
SOX2-OT-228ENST00000597828 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
SOX2-OT-228ENST00000597828 TBX22Q9Y458 520 aa18.5■□□□□ 0.55
SOX2-OT-228ENST00000597828 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
SOX2-OT-228ENST00000597828 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
SOX2-OT-228ENST00000597828 NAIPQ13075 1403 aa18.49■□□□□ 0.55
SOX2-OT-228ENST00000597828 PIK3R4Q99570 1358 aa18.47■□□□□ 0.55
SOX2-OT-228ENST00000597828 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
SOX2-OT-228ENST00000597828 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SOX2-OT-228ENST00000597828 NCOA3Q9Y6Q9 1424 aa18.45■□□□□ 0.54
SOX2-OT-228ENST00000597828 LRP6O75581 1613 aa18.44■□□□□ 0.54
SOX2-OT-228ENST00000597828 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
SOX2-OT-228ENST00000597828 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
SOX2-OT-228ENST00000597828 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
SOX2-OT-228ENST00000597828 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
SOX2-OT-228ENST00000597828 METP08581 1390 aa18.41■□□□□ 0.54
SOX2-OT-228ENST00000597828 JCADQ9P266 1359 aa18.41■□□□□ 0.54
SOX2-OT-228ENST00000597828 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
SOX2-OT-228ENST00000597828 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
SOX2-OT-228ENST00000597828 C19orf44Q9H6X5 657 aa18.37■□□□□ 0.53
SOX2-OT-228ENST00000597828 DCCP43146 1447 aa18.37■□□□□ 0.53
SOX2-OT-228ENST00000597828 MST1RQ04912 1400 aa18.37■□□□□ 0.53
SOX2-OT-228ENST00000597828 ATF3P18847 181 aa18.36■□□□□ 0.53
SOX2-OT-228ENST00000597828 CADPS2Q86UW7 1296 aa18.36■□□□□ 0.53
SOX2-OT-228ENST00000597828 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
SOX2-OT-228ENST00000597828 BRINP3Q76B58 766 aa18.33■□□□□ 0.52
SOX2-OT-228ENST00000597828 LAMC1P11047 1609 aa18.32■□□□□ 0.52
SOX2-OT-228ENST00000597828 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
SOX2-OT-228ENST00000597828 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
SOX2-OT-228ENST00000597828 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
SOX2-OT-228ENST00000597828 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
SOX2-OT-228ENST00000597828 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.52
SOX2-OT-228ENST00000597828 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
SOX2-OT-228ENST00000597828 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-228ENST00000597828 FOXD1Q16676 465 aa18.26■□□□□ 0.51
SOX2-OT-228ENST00000597828 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-228ENST00000597828 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
SOX2-OT-228ENST00000597828 SETD5Q9C0A6 1442 aa18.25■□□□□ 0.51
SOX2-OT-228ENST00000597828 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
SOX2-OT-228ENST00000597828 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
SOX2-OT-228ENST00000597828 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
SOX2-OT-228ENST00000597828 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-228ENST00000597828 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-228ENST00000597828 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-228ENST00000597828 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
SOX2-OT-228ENST00000597828 FMN2Q9NZ56 1722 aa18.21■□□□□ 0.51
SOX2-OT-228ENST00000597828 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-228ENST00000597828 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
SOX2-OT-228ENST00000597828 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-228ENST00000597828 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
SOX2-OT-228ENST00000597828 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
SOX2-OT-228ENST00000597828 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
SOX2-OT-228ENST00000597828 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
SOX2-OT-228ENST00000597828 ZNF772Q68DY9 489 aaPredicted RBP18.16■□□□□ 0.5
SOX2-OT-228ENST00000597828 AFF2P51816 1311 aa18.16■□□□□ 0.5
SOX2-OT-228ENST00000597828 ORAI2Q96SN7 254 aa18.15■□□□□ 0.5
SOX2-OT-228ENST00000597828 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
SOX2-OT-228ENST00000597828 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
SOX2-OT-228ENST00000597828 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms