RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 RPGRIP1LQ68CZ1 1315 aa30.01■■■□□ 2.4
IRF3-214ENST00000596788 RIMS2Q9UQ26 1411 aa30.01■■■□□ 2.39
IRF3-214ENST00000596788 SLIT1O75093 1534 aa30.01■■■□□ 2.39
IRF3-214ENST00000596788 ARHGAP23Q9P227 1491 aa30■■■□□ 2.39
IRF3-214ENST00000596788 PPP1R15AO75807 674 aaPredicted RBP29.99■■■□□ 2.39
IRF3-214ENST00000596788 TMEM2Q9UHN6 1383 aa29.99■■■□□ 2.39
IRF3-214ENST00000596788 NRXN1Q9ULB1 1477 aa29.99■■■□□ 2.39
IRF3-214ENST00000596788 PRAG1Q86YV5 1406 aa29.98■■■□□ 2.39
IRF3-214ENST00000596788 KDM2AQ9Y2K7 1162 aa29.98■■■□□ 2.39
IRF3-214ENST00000596788 TRPM1Q7Z4N2 1603 aa29.95■■■□□ 2.38
IRF3-214ENST00000596788 LMTK3Q96Q04 1460 aa29.93■■■□□ 2.38
IRF3-214ENST00000596788 NBPF8Q3BBV2 869 aa29.92■■■□□ 2.38
IRF3-214ENST00000596788 THEMISQ8N1K5 641 aaPredicted RBP29.92■■■□□ 2.38
IRF3-214ENST00000596788 ADGRF5Q8IZF2 1346 aa29.92■■■□□ 2.38
IRF3-214ENST00000596788 NUTM2DQ5VT03 806 aaPredicted RBP29.91■■■□□ 2.38
IRF3-214ENST00000596788 PIK3C2GO75747 1445 aa29.9■■■□□ 2.38
IRF3-214ENST00000596788 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
IRF3-214ENST00000596788 POLR1AO95602 1720 aaPredicted RBP29.9■■■□□ 2.38
IRF3-214ENST00000596788 KIAA1210Q9ULL0 1709 aa29.9■■■□□ 2.38
IRF3-214ENST00000596788 IQGAP1P46940 1657 aa29.88■■■□□ 2.37
IRF3-214ENST00000596788 NRXN3Q9Y4C0 1643 aa29.88■■■□□ 2.37
IRF3-214ENST00000596788 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
IRF3-214ENST00000596788 LAMC1P11047 1609 aa29.87■■■□□ 2.37
IRF3-214ENST00000596788 SCAF11Q99590 1463 aaKnown RBP29.87■■■□□ 2.37
IRF3-214ENST00000596788 VGFO15240 615 aaPredicted RBP29.85■■■□□ 2.37
IRF3-214ENST00000596788 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.85■■■□□ 2.37
IRF3-214ENST00000596788 SETBP1Q9Y6X0 1596 aa29.85■■■□□ 2.37
IRF3-214ENST00000596788 SETD1AO15047 1707 aaKnown RBP29.84■■■□□ 2.37
IRF3-214ENST00000596788 LTKP29376 864 aa29.83■■■□□ 2.37
IRF3-214ENST00000596788 TXNDC2Q86VQ3 553 aa29.8■■■□□ 2.36
IRF3-214ENST00000596788 PLEKHG1Q9ULL1 1385 aa29.79■■■□□ 2.36
IRF3-214ENST00000596788 HDGFP51858 240 aaKnown RBP29.79■■■□□ 2.36
IRF3-214ENST00000596788 ALKQ9UM73 1620 aa29.78■■■□□ 2.36
IRF3-214ENST00000596788 EID1Q9Y6B2 187 aa29.78■■■□□ 2.36
IRF3-214ENST00000596788 ASXL1Q8IXJ9 1541 aa29.76■■■□□ 2.36
IRF3-214ENST00000596788 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
IRF3-214ENST00000596788 ADGRB1O14514 1584 aa29.74■■■□□ 2.35
IRF3-214ENST00000596788 HSPA2P54652 639 aa29.74■■■□□ 2.35
IRF3-214ENST00000596788 CFAP70Q5T0N1 1121 aa29.73■■■□□ 2.35
IRF3-214ENST00000596788 ADAMTS13Q76LX8 1427 aa29.72■■■□□ 2.35
IRF3-214ENST00000596788 ANKLE2Q86XL3 938 aa29.72■■■□□ 2.35
IRF3-214ENST00000596788 C14orf93Q9H972 538 aaKnown RBP29.72■■■□□ 2.35
IRF3-214ENST00000596788 ROCK2O75116 1388 aaKnown RBP29.72■■■□□ 2.35
IRF3-214ENST00000596788 GPRASP1Q5JY77 1395 aa29.72■■■□□ 2.35
IRF3-214ENST00000596788 DIP2AQ14689 1571 aa29.72■■■□□ 2.35
IRF3-214ENST00000596788 MED14O60244 1454 aa29.71■■■□□ 2.35
IRF3-214ENST00000596788 STRCQ7RTU9 1775 aa29.71■■■□□ 2.35
IRF3-214ENST00000596788 NBPF1Q3BBV0 1214 aa29.7■■■□□ 2.35
IRF3-214ENST00000596788 NPHP4O75161 1426 aaPredicted RBP29.68■■■□□ 2.34
IRF3-214ENST00000596788 NCKAP5LQ9HCH0 1330 aa29.67■■■□□ 2.34
IRF3-214ENST00000596788 BCANQ96GW7 911 aa29.63■■■□□ 2.33
IRF3-214ENST00000596788 CARD11Q9BXL7 1154 aa29.61■■■□□ 2.33
IRF3-214ENST00000596788 METP08581 1390 aa29.6■■■□□ 2.33
IRF3-214ENST00000596788 KNDC1Q76NI1 1749 aa29.59■■■□□ 2.33
IRF3-214ENST00000596788 TMEM132EQ6IEE7 984 aa29.59■■■□□ 2.33
IRF3-214ENST00000596788 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
IRF3-214ENST00000596788 SLC26A8Q96RN1 970 aa29.58■■■□□ 2.33
IRF3-214ENST00000596788 USP47Q96K76 1375 aa29.57■■■□□ 2.32
IRF3-214ENST00000596788 YTHDC2Q9H6S0 1430 aaKnown RBP29.56■■■□□ 2.32
IRF3-214ENST00000596788 TBX22Q9Y458 520 aa29.55■■■□□ 2.32
IRF3-214ENST00000596788 XRN1Q8IZH2 1706 aaKnown RBP29.54■■■□□ 2.32
IRF3-214ENST00000596788 CHD2O14647 1828 aaKnown RBP29.52■■■□□ 2.32
IRF3-214ENST00000596788 PTPRUQ92729 1446 aa29.52■■■□□ 2.32
IRF3-214ENST00000596788 LRPPRCP42704 1394 aaKnown RBP29.52■■■□□ 2.32
IRF3-214ENST00000596788 CPS1P31327 1500 aa29.5■■■□□ 2.31
IRF3-214ENST00000596788 DLC1Q96QB1 1528 aa29.5■■■□□ 2.31
IRF3-214ENST00000596788 PIK3R4Q99570 1358 aa29.49■■■□□ 2.31
IRF3-214ENST00000596788 NWD1Q149M9 1564 aa29.48■■■□□ 2.31
IRF3-214ENST00000596788 TECPR2O15040 1411 aa29.48■■■□□ 2.31
IRF3-214ENST00000596788 HSPA5P11021 654 aaKnown RBP29.48■■■□□ 2.31
IRF3-214ENST00000596788 EIF4G2P78344 907 aaKnown RBP eCLIP29.48■■■□□ 2.31
IRF3-214ENST00000596788 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
IRF3-214ENST00000596788 QRICH2Q9H0J4 1663 aa29.47■■■□□ 2.31
IRF3-214ENST00000596788 EIF3AQ14152 1382 aaKnown RBP29.46■■■□□ 2.31
IRF3-214ENST00000596788 STK26Q9P289 416 aa29.45■■■□□ 2.31
IRF3-214ENST00000596788 TRAK1Q9UPV9 953 aa29.45■■■□□ 2.31
IRF3-214ENST00000596788 ABCC11Q96J66 1382 aa29.44■■■□□ 2.3
IRF3-214ENST00000596788 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
IRF3-214ENST00000596788 HIRIP3Q9BW71 556 aaPredicted RBP29.41■■■□□ 2.3
IRF3-214ENST00000596788 PTCH1Q13635 1447 aa29.4■■■□□ 2.3
IRF3-214ENST00000596788 ST20-MTHFSA0A0A6YYL1 179 aa29.38■■■□□ 2.29
IRF3-214ENST00000596788 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
IRF3-214ENST00000596788 AMOTL2Q9Y2J4 779 aa29.37■■■□□ 2.29
IRF3-214ENST00000596788 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
IRF3-214ENST00000596788 CENPJQ9HC77 1338 aaPredicted RBP29.35■■■□□ 2.29
IRF3-214ENST00000596788 PLEKHH1Q9ULM0 1364 aa29.35■■■□□ 2.29
IRF3-214ENST00000596788 PRAM1Q96QH2 718 aa29.33■■■□□ 2.29
IRF3-214ENST00000596788 NKTRP30414 1462 aaKnown RBP29.33■■■□□ 2.29
IRF3-214ENST00000596788 KCNA6P17658 529 aa29.32■■■□□ 2.28
IRF3-214ENST00000596788 SBNO2Q9Y2G9 1366 aa29.31■■■□□ 2.28
IRF3-214ENST00000596788 TESK2Q96S53 571 aa29.31■■■□□ 2.28
IRF3-214ENST00000596788 SIRT1Q96EB6 747 aa29.3■■■□□ 2.28
IRF3-214ENST00000596788 DMRT2Q9Y5R5 561 aa29.3■■■□□ 2.28
IRF3-214ENST00000596788 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.3■■■□□ 2.28
IRF3-214ENST00000596788 WAPLQ7Z5K2 1190 aa29.28■■■□□ 2.28
IRF3-214ENST00000596788 POGKQ9P215 609 aa29.27■■■□□ 2.28
IRF3-214ENST00000596788 ADGRB2O60241 1585 aa29.26■■■□□ 2.28
IRF3-214ENST00000596788 TULP4Q9NRJ4 1543 aa29.26■■■□□ 2.27
IRF3-214ENST00000596788 NALCNQ8IZF0 1738 aa29.26■■■□□ 2.27
IRF3-214ENST00000596788 ZNF316A6NFI3 1004 aaPredicted RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms