RNA–Protein interactions for RNA: ENST00000596647.1

PDE4C-209, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-209ENST00000596647 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
PDE4C-209ENST00000596647 RGS17Q9UGC6 210 aaPredicted RBP23.66■■□□□ 1.38
PDE4C-209ENST00000596647 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
PDE4C-209ENST00000596647 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
PDE4C-209ENST00000596647 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
PDE4C-209ENST00000596647 UNC13BO14795 1591 aa23.64■■□□□ 1.37
PDE4C-209ENST00000596647 TMEM131LA2VDJ0 1609 aa23.63■■□□□ 1.37
PDE4C-209ENST00000596647 GCC2Q8IWJ2 1684 aa23.62■■□□□ 1.37
PDE4C-209ENST00000596647 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
PDE4C-209ENST00000596647 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
PDE4C-209ENST00000596647 MSH6P52701 1360 aa23.6■■□□□ 1.37
PDE4C-209ENST00000596647 BCANQ96GW7 911 aa23.59■■□□□ 1.37
PDE4C-209ENST00000596647 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
PDE4C-209ENST00000596647 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.37
PDE4C-209ENST00000596647 CHD2O14647 1828 aaKnown RBP23.58■■□□□ 1.37
PDE4C-209ENST00000596647 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
PDE4C-209ENST00000596647 SLAIN2Q9P270 581 aa23.56■■□□□ 1.36
PDE4C-209ENST00000596647 E9PCH4 1651 aa23.56■■□□□ 1.36
PDE4C-209ENST00000596647 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
PDE4C-209ENST00000596647 IQGAP3Q86VI3 1631 aa23.54■■□□□ 1.36
PDE4C-209ENST00000596647 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
PDE4C-209ENST00000596647 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.53■■□□□ 1.36
PDE4C-209ENST00000596647 ADAMTS13Q76LX8 1427 aa23.52■■□□□ 1.36
PDE4C-209ENST00000596647 DIP2AQ14689 1571 aa23.51■■□□□ 1.35
PDE4C-209ENST00000596647 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
PDE4C-209ENST00000596647 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
PDE4C-209ENST00000596647 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
PDE4C-209ENST00000596647 CHGAP10645 457 aaKnown RBP23.48■■□□□ 1.35
PDE4C-209ENST00000596647 JCADQ9P266 1359 aa23.47■■□□□ 1.35
PDE4C-209ENST00000596647 NUP155O75694 1391 aa23.46■■□□□ 1.35
PDE4C-209ENST00000596647 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.34
PDE4C-209ENST00000596647 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
PDE4C-209ENST00000596647 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
PDE4C-209ENST00000596647 TRPM2O94759 1503 aa23.42■■□□□ 1.34
PDE4C-209ENST00000596647 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.41■■□□□ 1.34
PDE4C-209ENST00000596647 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
PDE4C-209ENST00000596647 CADPS2Q86UW7 1296 aa23.4■■□□□ 1.34
PDE4C-209ENST00000596647 AHDC1Q5TGY3 1603 aaPredicted RBP23.39■■□□□ 1.33
PDE4C-209ENST00000596647 PTPRUQ92729 1446 aa23.39■■□□□ 1.33
PDE4C-209ENST00000596647 ATF3P18847 181 aa23.37■■□□□ 1.33
PDE4C-209ENST00000596647 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
PDE4C-209ENST00000596647 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
PDE4C-209ENST00000596647 LRP6O75581 1613 aa23.36■■□□□ 1.33
PDE4C-209ENST00000596647 NRXN3Q9Y4C0 1643 aa23.36■■□□□ 1.33
PDE4C-209ENST00000596647 SPATA31A6Q5VVP1 1343 aa23.35■■□□□ 1.33
PDE4C-209ENST00000596647 ITGAEP38570 1179 aa23.35■■□□□ 1.33
PDE4C-209ENST00000596647 DCCP43146 1447 aa23.34■■□□□ 1.33
PDE4C-209ENST00000596647 SPHKAPQ2M3C7 1700 aa23.34■■□□□ 1.33
PDE4C-209ENST00000596647 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
PDE4C-209ENST00000596647 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
PDE4C-209ENST00000596647 BRINP3Q76B58 766 aa23.3■■□□□ 1.32
PDE4C-209ENST00000596647 SETD1AO15047 1707 aaKnown RBP23.28■■□□□ 1.32
PDE4C-209ENST00000596647 METP08581 1390 aa23.27■■□□□ 1.32
PDE4C-209ENST00000596647 ASXL1Q8IXJ9 1541 aa23.27■■□□□ 1.32
PDE4C-209ENST00000596647 MST1RQ04912 1400 aa23.25■■□□□ 1.31
PDE4C-209ENST00000596647 ZNF326Q5BKZ1 582 aaKnown RBP23.25■■□□□ 1.31
PDE4C-209ENST00000596647 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
PDE4C-209ENST00000596647 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
PDE4C-209ENST00000596647 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
PDE4C-209ENST00000596647 NEXMIFQ5QGS0 1516 aa23.24■■□□□ 1.31
PDE4C-209ENST00000596647 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
PDE4C-209ENST00000596647 SETD5Q9C0A6 1442 aa23.23■■□□□ 1.31
PDE4C-209ENST00000596647 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
PDE4C-209ENST00000596647 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
PDE4C-209ENST00000596647 NHSL1Q5SYE7 1610 aa23.21■■□□□ 1.31
PDE4C-209ENST00000596647 NAIPQ13075 1403 aa23.2■■□□□ 1.3
PDE4C-209ENST00000596647 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
PDE4C-209ENST00000596647 KIF1BO60333 1816 aa23.15■■□□□ 1.3
PDE4C-209ENST00000596647 NUTM2BA6NNL0 878 aaPredicted RBP23.14■■□□□ 1.29
PDE4C-209ENST00000596647 NUTM2EB1AL46 878 aaPredicted RBP23.14■■□□□ 1.29
PDE4C-209ENST00000596647 NUTM2AQ8IVF1 878 aaPredicted RBP23.14■■□□□ 1.29
PDE4C-209ENST00000596647 LRRC59Q96AG4 307 aaKnown RBP23.14■■□□□ 1.29
PDE4C-209ENST00000596647 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
PDE4C-209ENST00000596647 PTCH1Q13635 1447 aa23.13■■□□□ 1.29
PDE4C-209ENST00000596647 RXRBP28702 533 aa23.12■■□□□ 1.29
PDE4C-209ENST00000596647 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
PDE4C-209ENST00000596647 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
PDE4C-209ENST00000596647 UPF1Q92900 1129 aaKnown RBP eCLIP23.11■■□□□ 1.29
PDE4C-209ENST00000596647 PNPLA6Q8IY17 1366 aa23.11■■□□□ 1.29
PDE4C-209ENST00000596647 AFF2P51816 1311 aa23.1■■□□□ 1.29
PDE4C-209ENST00000596647 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
PDE4C-209ENST00000596647 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
PDE4C-209ENST00000596647 C1orf167Q5SNV9 1468 aa23.1■■□□□ 1.29
PDE4C-209ENST00000596647 LAMC1P11047 1609 aa23.09■■□□□ 1.29
PDE4C-209ENST00000596647 DDX17Q92841 729 aaKnown RBP23.09■■□□□ 1.29
PDE4C-209ENST00000596647 ROBO2Q9HCK4 1378 aa23.09■■□□□ 1.29
PDE4C-209ENST00000596647 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
PDE4C-209ENST00000596647 C8orf37Q96NL8 207 aa23.03■■□□□ 1.28
PDE4C-209ENST00000596647 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
PDE4C-209ENST00000596647 PPLO60437 1756 aa23.01■■□□□ 1.27
PDE4C-209ENST00000596647 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
PDE4C-209ENST00000596647 ORAI2Q96SN7 254 aa23■■□□□ 1.27
PDE4C-209ENST00000596647 RGS12O14924 1447 aa22.99■■□□□ 1.27
PDE4C-209ENST00000596647 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
PDE4C-209ENST00000596647 RBM6P78332 1123 aaKnown RBP22.98■■□□□ 1.27
PDE4C-209ENST00000596647 ADAMTS2O95450 1211 aa22.95■■□□□ 1.26
PDE4C-209ENST00000596647 CDC42BPGQ6DT37 1551 aa22.95■■□□□ 1.26
PDE4C-209ENST00000596647 NGLY1Q96IV0 654 aa22.94■■□□□ 1.26
PDE4C-209ENST00000596647 COL22A1Q8NFW1 1626 aaPredicted RBP22.93■■□□□ 1.26
PDE4C-209ENST00000596647 TECPR2O15040 1411 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms