RNA–Protein interactions for RNA: ENST00000596554.5

C19orf48-206, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 727 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-206ENST00000596554 UNC13BO14795 1591 aa20.2■□□□□ 0.82
C19orf48-206ENST00000596554 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
C19orf48-206ENST00000596554 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
C19orf48-206ENST00000596554 TMEM131LA2VDJ0 1609 aa20.19■□□□□ 0.82
C19orf48-206ENST00000596554 CHD2O14647 1828 aaKnown RBP20.18■□□□□ 0.82
C19orf48-206ENST00000596554 ROBO1Q9Y6N7 1651 aa20.18■□□□□ 0.82
C19orf48-206ENST00000596554 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
C19orf48-206ENST00000596554 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
C19orf48-206ENST00000596554 E9PCH4 1651 aa20.14■□□□□ 0.81
C19orf48-206ENST00000596554 RIMS2Q9UQ26 1411 aa20.13■□□□□ 0.81
C19orf48-206ENST00000596554 RGS17Q9UGC6 210 aaPredicted RBP20.13■□□□□ 0.81
C19orf48-206ENST00000596554 IQGAP3Q86VI3 1631 aa20.12■□□□□ 0.81
C19orf48-206ENST00000596554 ROCK1Q13464 1354 aa20.11■□□□□ 0.81
C19orf48-206ENST00000596554 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
C19orf48-206ENST00000596554 MSH6P52701 1360 aa20.09■□□□□ 0.81
C19orf48-206ENST00000596554 HDGFP51858 240 aaKnown RBP20.09■□□□□ 0.81
C19orf48-206ENST00000596554 BCANQ96GW7 911 aa20.08■□□□□ 0.81
C19orf48-206ENST00000596554 DIP2AQ14689 1571 aa20.08■□□□□ 0.8
C19orf48-206ENST00000596554 TBX22Q9Y458 520 aa20.07■□□□□ 0.8
C19orf48-206ENST00000596554 PHLPP1O60346 1717 aa20.06■□□□□ 0.8
C19orf48-206ENST00000596554 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
C19orf48-206ENST00000596554 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
C19orf48-206ENST00000596554 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
C19orf48-206ENST00000596554 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
C19orf48-206ENST00000596554 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
C19orf48-206ENST00000596554 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
C19orf48-206ENST00000596554 COL16A1Q07092 1604 aaPredicted RBP20.02■□□□□ 0.79
C19orf48-206ENST00000596554 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
C19orf48-206ENST00000596554 NUP155O75694 1391 aa19.99■□□□□ 0.79
C19orf48-206ENST00000596554 JCADQ9P266 1359 aa19.99■□□□□ 0.79
C19orf48-206ENST00000596554 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
C19orf48-206ENST00000596554 POTEAQ6S8J7 498 aa19.99■□□□□ 0.79
C19orf48-206ENST00000596554 TRPM2O94759 1503 aa19.98■□□□□ 0.79
C19orf48-206ENST00000596554 SPHKAPQ2M3C7 1700 aa19.98■□□□□ 0.79
C19orf48-206ENST00000596554 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
C19orf48-206ENST00000596554 NUTM2DQ5VT03 806 aaPredicted RBP19.96■□□□□ 0.79
C19orf48-206ENST00000596554 AHDC1Q5TGY3 1603 aaPredicted RBP19.95■□□□□ 0.78
C19orf48-206ENST00000596554 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
C19orf48-206ENST00000596554 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
C19orf48-206ENST00000596554 SETBP1Q9Y6X0 1596 aa19.94■□□□□ 0.78
C19orf48-206ENST00000596554 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
C19orf48-206ENST00000596554 CADPS2Q86UW7 1296 aa19.93■□□□□ 0.78
C19orf48-206ENST00000596554 SHPRHQ149N8 1683 aa19.92■□□□□ 0.78
C19orf48-206ENST00000596554 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
C19orf48-206ENST00000596554 DCCP43146 1447 aa19.91■□□□□ 0.78
C19orf48-206ENST00000596554 ATF3P18847 181 aa19.9■□□□□ 0.78
C19orf48-206ENST00000596554 AMOTL2Q9Y2J4 779 aa19.9■□□□□ 0.78
C19orf48-206ENST00000596554 LRP6O75581 1613 aa19.9■□□□□ 0.78
C19orf48-206ENST00000596554 ITGAEP38570 1179 aa19.89■□□□□ 0.77
C19orf48-206ENST00000596554 SPATA31A6Q5VVP1 1343 aa19.89■□□□□ 0.77
C19orf48-206ENST00000596554 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
C19orf48-206ENST00000596554 CLTCL1P53675 1640 aa19.86■□□□□ 0.77
C19orf48-206ENST00000596554 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
C19orf48-206ENST00000596554 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
C19orf48-206ENST00000596554 NHSL1Q5SYE7 1610 aa19.84■□□□□ 0.77
C19orf48-206ENST00000596554 KIF1BO60333 1816 aa19.83■□□□□ 0.77
C19orf48-206ENST00000596554 ASXL1Q8IXJ9 1541 aa19.83■□□□□ 0.77
C19orf48-206ENST00000596554 METP08581 1390 aa19.83■□□□□ 0.76
C19orf48-206ENST00000596554 MST1RQ04912 1400 aa19.82■□□□□ 0.76
C19orf48-206ENST00000596554 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
C19orf48-206ENST00000596554 ADGRL3Q9HAR2 1447 aa19.8■□□□□ 0.76
C19orf48-206ENST00000596554 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
C19orf48-206ENST00000596554 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
C19orf48-206ENST00000596554 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
C19orf48-206ENST00000596554 NAIPQ13075 1403 aa19.79■□□□□ 0.76
C19orf48-206ENST00000596554 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
C19orf48-206ENST00000596554 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
C19orf48-206ENST00000596554 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
C19orf48-206ENST00000596554 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
C19orf48-206ENST00000596554 LAMC1P11047 1609 aa19.73■□□□□ 0.75
C19orf48-206ENST00000596554 PTCH1Q13635 1447 aa19.73■□□□□ 0.75
C19orf48-206ENST00000596554 CDK12Q9NYV4 1490 aaPredicted RBP19.72■□□□□ 0.75
C19orf48-206ENST00000596554 HFM1A2PYH4 1435 aa19.71■□□□□ 0.75
C19orf48-206ENST00000596554 PPLO60437 1756 aa19.7■□□□□ 0.74
C19orf48-206ENST00000596554 LRRC59Q96AG4 307 aaKnown RBP19.7■□□□□ 0.74
C19orf48-206ENST00000596554 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
C19orf48-206ENST00000596554 C1orf167Q5SNV9 1468 aa19.68■□□□□ 0.74
C19orf48-206ENST00000596554 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
C19orf48-206ENST00000596554 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
C19orf48-206ENST00000596554 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
C19orf48-206ENST00000596554 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
C19orf48-206ENST00000596554 RXRBP28702 533 aa19.67■□□□□ 0.74
C19orf48-206ENST00000596554 AFF2P51816 1311 aa19.67■□□□□ 0.74
C19orf48-206ENST00000596554 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
C19orf48-206ENST00000596554 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
C19orf48-206ENST00000596554 UPF1Q92900 1129 aaKnown RBP eCLIP19.66■□□□□ 0.74not detected■■■■■ 30.2
C19orf48-206ENST00000596554 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
C19orf48-206ENST00000596554 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
C19orf48-206ENST00000596554 SOS2Q07890 1332 aaPredicted RBP19.61■□□□□ 0.73
C19orf48-206ENST00000596554 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
C19orf48-206ENST00000596554 CDC42BPGQ6DT37 1551 aa19.6■□□□□ 0.73
C19orf48-206ENST00000596554 COL22A1Q8NFW1 1626 aaPredicted RBP19.59■□□□□ 0.73
C19orf48-206ENST00000596554 C8orf37Q96NL8 207 aa19.59■□□□□ 0.73
C19orf48-206ENST00000596554 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
C19orf48-206ENST00000596554 IFT172Q9UG01 1749 aa19.58■□□□□ 0.72
C19orf48-206ENST00000596554 RGS12O14924 1447 aa19.58■□□□□ 0.72
C19orf48-206ENST00000596554 RBM6P78332 1123 aaKnown RBP19.56■□□□□ 0.72
C19orf48-206ENST00000596554 QTRT2Q9H974 415 aaKnown RBP19.56■□□□□ 0.72
C19orf48-206ENST00000596554 SPATA31E1Q6ZUB1 1445 aa19.55■□□□□ 0.72
C19orf48-206ENST00000596554 TECPR2O15040 1411 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms