RNA–Protein interactions for RNA: ENST00000595529.1

LTBP4-213, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-213ENST00000595529 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
LTBP4-213ENST00000595529 SLC52A1Q9NWF4 448 aa22.36■■□□□ 1.17
LTBP4-213ENST00000595529 NWD1Q149M9 1564 aa22.36■■□□□ 1.17
LTBP4-213ENST00000595529 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
LTBP4-213ENST00000595529 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
LTBP4-213ENST00000595529 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
LTBP4-213ENST00000595529 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
LTBP4-213ENST00000595529 NAIPQ13075 1403 aa22.32■■□□□ 1.16
LTBP4-213ENST00000595529 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
LTBP4-213ENST00000595529 TRIM52Q96A61 297 aa22.31■■□□□ 1.16
LTBP4-213ENST00000595529 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
LTBP4-213ENST00000595529 MSH6P52701 1360 aa22.28■■□□□ 1.16
LTBP4-213ENST00000595529 RBM33Q96EV2 1170 aaKnown RBP22.28■■□□□ 1.16
LTBP4-213ENST00000595529 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
LTBP4-213ENST00000595529 NUP155O75694 1391 aa22.26■■□□□ 1.15
LTBP4-213ENST00000595529 POTEAQ6S8J7 498 aa22.26■■□□□ 1.15
LTBP4-213ENST00000595529 ACIN1Q9UKV3 1341 aaKnown RBP22.26■■□□□ 1.15
LTBP4-213ENST00000595529 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
LTBP4-213ENST00000595529 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
LTBP4-213ENST00000595529 BCANQ96GW7 911 aa22.24■■□□□ 1.15
LTBP4-213ENST00000595529 RIMS2Q9UQ26 1411 aa22.23■■□□□ 1.15
LTBP4-213ENST00000595529 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
LTBP4-213ENST00000595529 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
LTBP4-213ENST00000595529 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
LTBP4-213ENST00000595529 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
LTBP4-213ENST00000595529 GCC2Q8IWJ2 1684 aa22.21■■□□□ 1.15
LTBP4-213ENST00000595529 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
LTBP4-213ENST00000595529 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
LTBP4-213ENST00000595529 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
LTBP4-213ENST00000595529 JCADQ9P266 1359 aa22.2■■□□□ 1.14
LTBP4-213ENST00000595529 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-213ENST00000595529 UNC13BO14795 1591 aa22.18■■□□□ 1.14
LTBP4-213ENST00000595529 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.17■■□□□ 1.14
LTBP4-213ENST00000595529 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
LTBP4-213ENST00000595529 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
LTBP4-213ENST00000595529 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
LTBP4-213ENST00000595529 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
LTBP4-213ENST00000595529 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
LTBP4-213ENST00000595529 PIK3R4Q99570 1358 aa22.14■■□□□ 1.14
LTBP4-213ENST00000595529 HRCP23327 699 aa22.14■■□□□ 1.13
LTBP4-213ENST00000595529 E9PCH4 1651 aa22.11■■□□□ 1.13
LTBP4-213ENST00000595529 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
LTBP4-213ENST00000595529 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
LTBP4-213ENST00000595529 C19orf44Q9H6X5 657 aa22.1■■□□□ 1.13
LTBP4-213ENST00000595529 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
LTBP4-213ENST00000595529 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
LTBP4-213ENST00000595529 AHDC1Q5TGY3 1603 aaPredicted RBP22.09■■□□□ 1.13
LTBP4-213ENST00000595529 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
LTBP4-213ENST00000595529 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.08■■□□□ 1.12
LTBP4-213ENST00000595529 C14orf37Q86TY3 774 aa22.07■■□□□ 1.12
LTBP4-213ENST00000595529 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
LTBP4-213ENST00000595529 LRP6O75581 1613 aa22.06■■□□□ 1.12
LTBP4-213ENST00000595529 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
LTBP4-213ENST00000595529 TRPM2O94759 1503 aa22.06■■□□□ 1.12
LTBP4-213ENST00000595529 ATF3P18847 181 aa22.05■■□□□ 1.12
LTBP4-213ENST00000595529 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
LTBP4-213ENST00000595529 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
LTBP4-213ENST00000595529 DCCP43146 1447 aa22.02■■□□□ 1.12
LTBP4-213ENST00000595529 PTPRUQ92729 1446 aa22.02■■□□□ 1.12
LTBP4-213ENST00000595529 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-213ENST00000595529 AMOTL2Q9Y2J4 779 aa22.01■■□□□ 1.11
LTBP4-213ENST00000595529 MEX3CQ5U5Q3 659 aaKnown RBP22■■□□□ 1.11
LTBP4-213ENST00000595529 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
LTBP4-213ENST00000595529 FOXD1Q16676 465 aa21.98■■□□□ 1.11
LTBP4-213ENST00000595529 SETBP1Q9Y6X0 1596 aa21.98■■□□□ 1.11
LTBP4-213ENST00000595529 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
LTBP4-213ENST00000595529 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
LTBP4-213ENST00000595529 ASXL1Q8IXJ9 1541 aa21.95■■□□□ 1.1
LTBP4-213ENST00000595529 MST1RQ04912 1400 aa21.92■■□□□ 1.1
LTBP4-213ENST00000595529 UPF1Q92900 1129 aaKnown RBP eCLIP21.92■■□□□ 1.1
LTBP4-213ENST00000595529 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
LTBP4-213ENST00000595529 SPHKAPQ2M3C7 1700 aa21.91■■□□□ 1.1
LTBP4-213ENST00000595529 NHSL1Q5SYE7 1610 aa21.9■■□□□ 1.1
LTBP4-213ENST00000595529 METP08581 1390 aa21.89■■□□□ 1.1
LTBP4-213ENST00000595529 RXRBP28702 533 aa21.89■■□□□ 1.09
LTBP4-213ENST00000595529 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-213ENST00000595529 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-213ENST00000595529 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-213ENST00000595529 ADGRL3Q9HAR2 1447 aa21.87■■□□□ 1.09
LTBP4-213ENST00000595529 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
LTBP4-213ENST00000595529 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
LTBP4-213ENST00000595529 AFF2P51816 1311 aa21.84■■□□□ 1.09
LTBP4-213ENST00000595529 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
LTBP4-213ENST00000595529 CCDC144AA2RUR9 1427 aa21.83■■□□□ 1.09
LTBP4-213ENST00000595529 CLTCL1P53675 1640 aa21.82■■□□□ 1.08
LTBP4-213ENST00000595529 PNPLA6Q8IY17 1366 aa21.81■■□□□ 1.08
LTBP4-213ENST00000595529 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
LTBP4-213ENST00000595529 PTCH1Q13635 1447 aa21.78■■□□□ 1.08
LTBP4-213ENST00000595529 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
LTBP4-213ENST00000595529 LAMC1P11047 1609 aa21.77■■□□□ 1.08
LTBP4-213ENST00000595529 ANKRD30BQ9BXX2 1392 aa21.77■■□□□ 1.08
LTBP4-213ENST00000595529 DDX17Q92841 729 aaKnown RBP21.77■■□□□ 1.08
LTBP4-213ENST00000595529 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
LTBP4-213ENST00000595529 C8orf37Q96NL8 207 aa21.76■■□□□ 1.07
LTBP4-213ENST00000595529 RGS12O14924 1447 aa21.75■■□□□ 1.07
LTBP4-213ENST00000595529 PRAG1Q86YV5 1406 aa21.75■■□□□ 1.07
LTBP4-213ENST00000595529 RBM6P78332 1123 aaKnown RBP21.75■■□□□ 1.07
LTBP4-213ENST00000595529 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
LTBP4-213ENST00000595529 KIF1BO60333 1816 aa21.74■■□□□ 1.07
LTBP4-213ENST00000595529 QTRT2Q9H974 415 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms